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LOCUS XM_070218617 4074 bp mRNA linear INV 09-DEC-2024 transcript variant X12, mRNA. ACCESSION XM_070218617 VERSION XM_070218617.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4074 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4074 /gene="LOC108054402" /note="smoothelin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054402" CDS 458..3355 /gene="LOC108054402" /codon_start=1 /product="smoothelin isoform X12" /protein_id="XP_070074718.1" /db_xref="GeneID:108054402" /translation="MSEPNGNGNGHGNVNQLAGYAGKDPLATSHGDALLDQNFQSLKS KEVRDSTSPTHEMRFHSMTLSQPNTTGWDVQTSSEVSPDGRAYRTETLAKTDEKTITT TGRNVASRRNVFEPAEESPVDSEPTTGRRPSYMDHTKSSLEHIRRDSLEISKSHYSRK SSVEDDSPVEPRNPNAAVKFDVPRKTSKPKGKDEDSASDSELPEIEEIFDLARLEKLL ETVASYEMRRRIRAQMRLIRKNMINAGTTITTTTITTSTIPGKKRDQSPETKTKEVRT ITSRRRVEQVDSSKTSPQGKPPVKPRERSASPAQKRRVSPPGKQSPGERSTTKVTTTT SSTTTRNAPAPSSKPAQGGGPIWADRSKVLKGQTNGSSTTRKGSTSSTTSSSGKITRT LTSSSTTTSSSSSSTTNTRNKQREEDSITSSYGVGPTDENGLPLFGIRALKKKTTPPP AEETKQEVTGYVIEEQFYSDNKSPPRHERKELIYSSNADELAAIKQQLQDEDDSSTAP ELDARVVREFKKVEQSQQSLPEDARYVRRGSVKELSEKFIRKESSSSTHSSQSVVRHE DETEEDSESNEVCSVIEAPQMRQNQSHISSSSTTRSSNTRSFLNSSADQRQVTSVDDV LERMRNADNVEEPGDTSEDREARALLNKFLGASVIMQGVESMLPPTATGQRLNSQGVK TTRITNTYSKSGNSTSSTNNNNKVSSSSSSAPVTRTTCDIEEIWDEQVLKQLLEQAST YEERRKIRARLRELMAEREAAQHKSSSTSEQRTETKSKDGGATVTTTTTKVTTRTVSG SAASKNISPLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARAA TVKDQLLQWCQHKTQEYENVQISNFSSSWSDGLAFCALIHHFLPDAFDYTTLTKQTRR HNFELAFTVADEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRNCQ" misc_feature <1067..1180 /gene="LOC108054402" /note="Smoothelin cytoskeleton protein; Region: Smoothelin; pfam12510" /db_xref="CDD:463614" misc_feature 2594..2731 /gene="LOC108054402" /note="Smoothelin cytoskeleton protein; Region: Smoothelin; pfam12510" /db_xref="CDD:463614" misc_feature 3026..3343 /gene="LOC108054402" /note="calponin homology (CH) domain found in the smoothelin family; Region: CH_SMTN-like; cd21200" /db_xref="CDD:409049" misc_feature order(3029..3031,3041..3043,3191..3193,3197..3202, 3209..3214,3218..3220,3245..3271,3293..3295,3299..3304, 3308..3313,3320..3325,3332..3334) /gene="LOC108054402" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409049" polyA_site 4074 /gene="LOC108054402" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gattttggtg ctcgatcgat tgcaacgtgc cgacgctccg tgaaaaagaa caatcctaca 61 acaaactacc caaacaacga tcgcatatta ttttttttac acactattat ttatttatca 121 accgttggaa atcaacaaaa aaaaaaaaaa gaagagagaa acccacagga ttagtcacac 181 atttcttgcc accaagtgtt tttttacgtg cttacgtttg ccggtgcaac aacaactcaa 241 cgaataatat taaaaaaaaa ctccaattac aacaacacag ctgcgaggag aggaagaatt 301 ttcgaatcaa aaaacgcaaa aaaaaggaat ataaattctt tttttacctg agtggcagca 361 gtccgaggac agcgagcgca agaagcagat ccgatcgcat ctctataagc tgcgcgagtc 421 gcgactttgc aacctctata ggcacgaaac ggacccaatg tcggagccca acggaaacgg 481 aaacggacat ggcaacgtga accagctggc cggttatgcg ggcaaggatc cgttggccac 541 cagccacggg gacgccctgc tcgaccagaa cttccagagc ctgaagtcga aggaggtccg 601 tgattcgacc agtcccacgc acgagatgcg cttccattcg atgacgctga gccagccgaa 661 taccaccggc tgggatgtgc agacctcctc ggaggtcagt cccgatggac gggcctatcg 721 caccgaaact ctggccaaaa cagatgaaaa gacaatcacc accacgggac gcaatgtggc 781 tagccgccgg aatgtttttg agccagctga ggaatctcct gtggattccg agcccacgac 841 tggacgtcgt ccctcgtaca tggatcacac gaagagctca ctggagcaca ttcgacgcga 901 ttccctcgag atcagcaaga gtcactactc ccgaaagtcc tcggtggagg atgattctcc 961 cgtagagcca cgcaatccca atgcagccgt caagttcgat gtgccgcgaa agacatccaa 1021 accaaagggt aaggatgagg actccgcctc cgattcggag cttcctgaga tcgaggagat 1081 cttcgatttg gcgagactgg agaaactcct ggaaaccgtg gccagctacg aaatgcgtcg 1141 tcgtatacgc gcccaaatgc gtctcatacg caagaacatg atcaatgcgg gtacgaccat 1201 tacaaccact acgattacaa cgagcacaat tccgggtaag aagcgagatc agagtcctga 1261 gaccaagacc aaggaggttc gcaccatcac gagtcgccgg cgggtggaac aggtggacag 1321 tagtaagact tcaccccagg gcaagccgcc ggtgaagccg agggagagaa gtgccagtcc 1381 cgcccagaaa cgtcgcgtta gtccaccggg caagcaatcg cctggcgaaa ggagcaccac 1441 caaggttacc accaccacca gtagcaccac tacccgcaat gctcctgctc cgtccagcaa 1501 acccgctcag ggaggtggtc ccatttgggc ggatcgctcc aaggtgctca agggtcaaac 1561 caatggtagt agtaccaccc gcaagggatc cacttccagt accacttcga gcagtggcaa 1621 gattacacgc accctgacca gctccagcac caccactagc tcctcgagta gcagcaccac 1681 caacacaagg aacaagcagc gcgaagagga ctcgatcacc tccagttatg gtgtgggacc 1741 cacggacgag aacggactgc cgctcttcgg gattagggca ctcaagaaga agacaacgcc 1801 accaccggca gaggagacca agcaagaagt cacaggctat gtgatcgagg agcagttcta 1861 ctcggacaac aagtcgccac ctcgtcacga gcgcaaggag ctgatctact cgagcaacgc 1921 tgacgaactg gctgccataa agcagcagct tcaggatgag gacgacagct cgacagctcc 1981 ggaattggat gcccgcgtgg tgcgggagtt caagaaggtg gagcaatccc agcaatcgct 2041 gcccgaggat gccagatatg tgcgtcgcgg atcggtgaag gagctcagcg agaagttcat 2101 acgcaaggag tcctcctcgt ccacccattc gagtcagtcg gtggtgaggc acgaggatga 2161 gaccgaggag gatagcgagt ccaacgaggt ctgcagcgtc atcgaggccc cgcagatgcg 2221 tcaaaatcag agccacatca gtagtagtag caccaccaga tccagtaata cacgatcatt 2281 cctcaacagc agtgccgatc agcgtcaggt taccagtgtg gacgatgtac tcgagcgtat 2341 gcgaaatgcc gataatgtgg aggaacccgg cgataccagc gaggatcgcg aggcccgtgc 2401 tctgctcaat aaattcctgg gagccagtgt cattatgcag ggagtggaaa gcatgctgcc 2461 acccaccgcc acgggtcagc gtctaaacag tcagggggta aagaccacgc ggattaccaa 2521 tacctacagc aagtccggca atagcacatc atccaccaac aacaacaaca aggtcagcag 2581 ctccagctcc tcagcaccag ttacacgtac aacttgtgac atcgaggaga tttgggacga 2641 gcaagtcctc aagcaattgc tggaacaggc gtccacctac gaggagcgtc gcaagatccg 2701 tgcacgtcta cgcgaactta tggcggaacg cgaagcagcc cagcataaga gctcctcgac 2761 cagcgaacag cgaacggaaa ccaagtccaa ggatggaggt gccactgtga ccacaacaac 2821 aacaaaggtt accacacgca ctgtcagcgg aagtgctgcc tccaagaaca tttcgccctt 2881 ggctaaattc aagcagctgg acaagcaggc agccgctcag caagcgcaaa aatcatctcc 2941 aacaacaagc acacccacga cccccggcgg ttcggcacaa ccgttgttca aatttaccga 3001 tccggcatta aatgcgcgcg ccgccactgt caaggatcaa cttctgcagt ggtgtcagca 3061 taaaacgcag gaatatgaga acgtccaaat aagcaacttt agctcgagct ggtcagacgg 3121 cctggccttt tgtgcgctga tacaccattt cttgccagat gcatttgact acaccacact 3181 aaccaagcag acgcgacgac acaatttcga gctggccttc accgttgctg atgagaaggc 3241 tggcattgca ccactgctgg atgtggagga catggtggag atgagtcgcc ccgactggaa 3301 gtgcgttttc gtctacgtgc agagcatata tcgccgattc cggaactgtc agtagtgatc 3361 atcatcatca acatcgtcat cgccatcgag agcagtggca gcagcagcag cagaatagtc 3421 caaatccaga tctaaatcta aatccaaatc caagtcaact caacagcaac agcagcaact 3481 cattaaattt taagcaaata ccacacatcc cctttggcat tttgtgttaa gacacaccat 3541 cccctatccc aaaaaaaacc catcccaaaa ccctttaata tatataaaga acccgtcatc 3601 ctgcgaatat ctaactgtat aatcggcata tatatatgta tattcttcaa ctgaagcgca 3661 aaatggctcg tcgaacgtga acagccgact ttttgtacgt tttttgtgtt tgttttaccc 3721 tttttttact attattacga ttacgcatta ttatttgtta tcgacattga acttgaagca 3781 gaaactatgc aaataattgt tgatttatat atttttttgt cataatttta attgtgaaga 3841 gcgaagaaga gaaaaagcag cgcagttact aaccctgctg gcggtcatcg ataaaagata 3901 aatatatata tttgaagata tataaagtct ctcgatgccg tcgctcacat tgatgaatta 3961 ctgtaataat aaacatatat tctatgtacg tacgtgtaac gagaacgaaa catttactaa 4021 ccgatggcat tgaaaaggcc gcaaagaaat aaaaaaaaag caaatgaaac ccaa