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LOCUS XM_070218615 3010 bp mRNA linear INV 09-DEC-2024 transcript variant X9, mRNA. ACCESSION XM_070218615 VERSION XM_070218615.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3010 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3010 /gene="LOC108054402" /note="smoothelin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054402" CDS 458..2923 /gene="LOC108054402" /codon_start=1 /product="ras guanine nucleotide exchange factor R isoform X9" /protein_id="XP_070074716.1" /db_xref="GeneID:108054402" /translation="MSEPNGNGNGHGNVNQLAGYAGKDPLATSHGDALLDQNFQSLKS KEVRDSTSPTHEMRFHSMTLSQPNTTGWDVQTSSEVSPDGRAYRTETLAKTDGVEKLN GGGLAEFKGRNEQRSSASHQGDDKNFVKQASDSSKTQLQETVVFGDETSGRTEMKMSS TSTSSSSKVVSSSSTVEYGGDEPRYLLDSQERPNPKPHHHHHHQQEQQQQREWEQDQR RQEQRIQEQLQRQEQQIRQEQLQRQEQQIRQEQLQRQEQQERFSESREQSNSTRNVQT QQHYEENKRYVDMDKASPEYQRHVQHLMEQPGEIISNTVEYPKPNVKMITTVKRLPDG TIVKNKRYETEQLTPSQSQTTHNQTRNQTHIQTHNQTHNQTHNQTHNQRRAQDVQDSQ VRDVVDNVEQKHVTESQSFSSVKKSSRRFSTETTSETVEEYDDRGQPLSRVVQKAPVP SATTTPTTTHSPRQSPAKDFSTHGFPSVRPNKPTQEYASQRPGTEEVVVVRSEKSRQV KQQTSSQRTTETEVLGEDYQSPHERSPQKLREAPSPSWEQPTTTRRHPVDEDFSTHGF PSVRTTTNHPDRPDGEVLQTSKTVSRNQSANRKTNTERIIETQVEHSPSGIRSGSPRR SQPREDYASPRGPAGKPSQSRPSTTSTTKTTSTTSEPLTRRQLQKEREVDAAHRAFAA SLRSSSPADSTTSVGSQHHHHQTPRSSVSSNRTFRREMREGSHDSQAPSESSRISSTT VTRHQTGGSTTSSTTKTKTTKPPVSRGPSSEPRSPTPKTAGGGAITTTTTISSTTKSS PSPAPASPTSAAPPASSAPPGTN" misc_feature 1841..>2686 /gene="LOC108054402" /note="RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]; Region: ROM1; COG5422" /db_xref="CDD:227709" polyA_site 3010 /gene="LOC108054402" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gattttggtg ctcgatcgat tgcaacgtgc cgacgctccg tgaaaaagaa caatcctaca 61 acaaactacc caaacaacga tcgcatatta ttttttttac acactattat ttatttatca 121 accgttggaa atcaacaaaa aaaaaaaaaa gaagagagaa acccacagga ttagtcacac 181 atttcttgcc accaagtgtt tttttacgtg cttacgtttg ccggtgcaac aacaactcaa 241 cgaataatat taaaaaaaaa ctccaattac aacaacacag ctgcgaggag aggaagaatt 301 ttcgaatcaa aaaacgcaaa aaaaaggaat ataaattctt tttttacctg agtggcagca 361 gtccgaggac agcgagcgca agaagcagat ccgatcgcat ctctataagc tgcgcgagtc 421 gcgactttgc aacctctata ggcacgaaac ggacccaatg tcggagccca acggaaacgg 481 aaacggacat ggcaacgtga accagctggc cggttatgcg ggcaaggatc cgttggccac 541 cagccacggg gacgccctgc tcgaccagaa cttccagagc ctgaagtcga aggaggtccg 601 tgattcgacc agtcccacgc acgagatgcg cttccattcg atgacgctga gccagccgaa 661 taccaccggc tgggatgtgc agacctcctc ggaggtcagt cccgatggac gggcctatcg 721 caccgaaact ctggccaaaa cagatggcgt ggagaagctc aatggtggtg gcctggccga 781 gttcaaaggt cgcaacgagc agcgctcgag tgcctcgcat cagggcgatg acaagaactt 841 cgtgaagcag gcctcggata gctcaaagac ccaactccag gagacggtgg tcttcgggga 901 tgagaccagc ggtcgcaccg agatgaagat gagctccacc tcgacctcgt cgtcctcgaa 961 ggtggtgtcc tcctcgtcga ccgttgagta tggcggcgat gagccgcgct atctgctgga 1021 cagccaggag aggccgaatc cgaagccaca tcatcatcat catcatcagc aggagcagca 1081 gcaacaacgg gagtgggagc aggatcaaag acgtcaggag cagcgcattc aggagcaact 1141 gcagcgacag gagcaacaga ttcgccagga gcaactgcag cgacaggagc aacagatccg 1201 ccaggagcaa ctgcagcgac aggagcaaca ggagcgattc tcggagagcc gcgagcagag 1261 caacagcacc cggaatgtcc agacccagca gcattacgag gagaacaagc gctatgtgga 1321 tatggacaag gcatcgcccg agtatcaacg ccatgtccag catttgatgg agcagcccgg 1381 cgagatcatc tccaatacgg tggagtatcc caagccgaat gtcaagatga tcaccacggt 1441 taagcgactg cccgatggca ccattgtcaa gaacaagcgc tacgagacgg agcaacttac 1501 tccgagtcag agtcagacga cccacaacca gacccgtaat caaacccaca ttcaaaccca 1561 caatcagacc cacaatcaga cccacaatca gacccacaat cagcgacgag ctcaggatgt 1621 gcaggatagt caggttcgcg atgtggtgga caatgtggag caaaagcatg tgacggagtc 1681 gcagagcttc tcctcggtga agaagtccag tcggcgattc tccacggaga ccacctcgga 1741 aacggtggag gagtacgacg atcgtggtca gcccttgtcc agggtggtgc aaaaggcacc 1801 ggttccctca gccacaacca caccgacaac cacccactca ccacgccagt cgccggccaa 1861 agactttagc acccatggct ttccctcggt gcgtccgaat aagcccaccc aggagtatgc 1921 ctcccaacgg cccggcaccg aagaggtggt ggtggtgcgt tccgagaaga gccgccaggt 1981 gaagcagcag acgagctcac agcgcaccac cgaaacggag gtgctgggtg aggattacca 2041 gtcaccccac gagagatccc cccagaagct gagggaggct ccatcgccca gttgggaaca 2101 acccacaacc accagacgtc atccggtgga tgaggatttc agcacccacg gctttccctc 2161 ggtgcgcaca accaccaacc accccgatcg tcccgatggc gaggtgttgc agacctccaa 2221 gacggtgagt cgcaatcaga gtgccaatag gaaaacgaac acggagcgga taattgagac 2281 acaggtggaa cattcacctt ccggcattcg atctggaagt cctcgacgat ctcagccacg 2341 cgaggattat gcttcgcctc gtggaccagc cggcaaacca agtcagtccc gtcccagcac 2401 caccagcacc accaagacga ccagcaccac ttcggagccc ttgactcgcc gtcagttgca 2461 aaaggagcgc gaggtggatg ccgcccatcg ggcctttgcc gcctcactgc gcagcagttc 2521 gccggcggac agcaccacct cggtgggttc gcagcaccac caccatcaga cgccacgatc 2581 gagtgtctcc tcgaatcgca ccttcagacg ggagatgcga gagggttccc atgacagcca 2641 ggcgccttcg gaatcgagca ggatcagctc gaccactgtg accaggcatc agacaggtgg 2701 cagcaccact agcagcacca ccaagaccaa gaccaccaag ccaccggtgt ccagaggtcc 2761 cagtagtgag cccaggtcgc ccactccgaa aacagcagga ggaggagcaa taaccaccac 2821 gaccaccatt agcagcacca ccaagtccag tcccagtcca gcaccagctt cacccacctc 2881 agccgcacca ccagccagtt ccgcaccacc aggtacgaat tagaaaaaaa aaataaataa 2941 ataaaaaaaa aaaaacaaaa gtttgagaaa ccacatgaat ataatatatg ctatataaat 3001 attggaacta