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LOCUS XM_070218606 2925 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070218606 VERSION XM_070218606.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2925 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2925 /gene="RunxA" /note="Runt related A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056789" CDS 964..2925 /gene="RunxA" /codon_start=1 /product="runt-related transcription factor 3 isoform X1" /protein_id="XP_070074707.1" /db_xref="GeneID:108056789" /translation="MHLTTTSSNSTASNANNNNNNTTNNNNNTSSNNNNNTSNTNGSS NNNNNTSGGNSSGNNNSNNTEQNTPPTPAQLLNEAYTKMTSDILAERTLGDFLTEHPG ELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYCAELR NCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREP RSKTMLSLLGQQQQFHFAFGQRPFHFSTDPLSGFRMPPIGNCQSASNTHWGYGSAASA YSPYLASSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDCVPMLPDSTA SDLDQHLSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGGASGGGGSGAGGAGAAGAGS GGAAGGNSILVPRYHTNASNEYNVHSSQNGPRSLSDSSQAESPVQEDLLTTNTPNLGS TAGGGGGGGGGAGSASAGGAAGSGAPPSGAGASVVGNPSMLGANQNFPGIVNQAQHSA ASAYGGGGSGVVGGGPPTAGCNGSLYPVLPASLLYSQLYTAANQSAHGFHSHTLPAHA SPNSSVHGELQSVMDHISNVGVRQQHHNIMAGGGVTHPGDLTLIGNCGASVRNIEDGG NSNRQVAALAAHRGHHNPTDNGGSVWRPY" misc_feature 1240..1626 /gene="RunxA" /note="Runt domain; Region: Runt; pfam00853" /db_xref="CDD:459963" ORIGIN 1 accaagcgac gctttttaac tgacgcgacg tcgacggccg gagccccacg aaggcagcga 61 cgccggcaga gcggcgacga cgcccccatc gccgctttat taaccgcaag tttgcgggag 121 gcaaacaaaa gagagcgaga tcttgcggcg agatagagag gaagagcgcc gaaaagagag 181 cgcggcgaag aatttaaaca gtcatgacgg cacatgttct ggctcgcaca gtgggccgca 241 gggccagaag tcggagaaaa ccaaaaataa taataataag ttttctggtc gtgccaggcg 301 tcaaccggct aaatgtgcag cccataaaca ttaaaaacaa taatacaaca aaaaaaagag 361 aaaaaagaat aacaaccgtg actggggtct aatcaatttg ttgttgcttc gttgcggttg 421 accaaaccag ctggccactc acttggaacc gaaattcgct ggccatcttg ggcctcctcg 481 caagactccg aagtttagcc aaccaaccag atccaaaaat ccgatgcgga ttctctcaac 541 cgaaagcgcg ttcaaccgaa atgaactgct tagtgtgacc aggcccccga aaatgggtgt 601 gtttgaggtg gccataagtg cggaaacttc acttatggtg accccaaaaa taaaatgtaa 661 tttcgagaga ccataaatga gtggatcgta aacgaggctt tcagggagtc ttgtgggtga 721 atcctgaatt attgattgtt ttccaaggcg gtgcttgaaa aggacgacaa aattgtgcgc 781 ctaaaaaaag tgcaggctca cgctcaaggg caactggagc agttcgagca gcagcaacag 841 caagagcaac agcaacatca gcagcagcaa cacctgcagc agcagcaaca actgttgcaa 901 caacagcagc agcaacaaca ctatcacagc tacaccgcca atagcaacaa caacaattac 961 aaaatgcatt taacaacgac atcgagcaat tcgacggcat ctaatgccaa caacaataac 1021 aacaacacaa ccaacaacaa taataatacc agcagcaaca acaacaacaa cacgagcaac 1081 acgaatggca gcagcaacaa caacaacaac acgagcggtg gaaacagtag tggaaataat 1141 aacagcaaca acacggagca aaatacaccg ccaacgcccg cgcaactttt aaacgaggcc 1201 tacacgaaaa tgacctcgga cattctggcc gagcgaacgc tgggcgactt cctcaccgaa 1261 catccaggcg agctgatccg caccagcagt ccgctcttcg tctgcacagt gctgccgccc 1321 cattggcgga gcaacaagac gctgccggtg gccttcaagg tcgtctcgct gggcgacatc 1381 atggacggaa cgatggtcac cgtgcgggcg ggcaacgatg agaactactg tgcggagctg 1441 cgcaactgca cggcggtgat gaagaaccag gtggccaagt tcaacgatct gcggtttgtg 1501 ggaaggagcg gcagagggaa gagcttcacg ctaaccatca ccgtgtcaac gaatccaccg 1561 cacatagcca cctacaacaa ggcgatcaaa gtgactgtcg atgggccacg cgagccccgt 1621 tccaagacaa tgttatccct tttaggacag caacagcagt tccacttcgc ctttggccaa 1681 agacccttcc acttctccac ggatccactt tccggcttcc ggatgccgcc catcggcaat 1741 tgtcagagtg ccagcaacac gcactggggc tatggatcgg ctgcctcagc gtattcgccg 1801 tatttggcca gcagcggctt atcctcctgc accacgccca cttccgccca gttcaacaat 1861 ccggccctgg gcttcacctg ctcctccaac gatcagagca acaaccagga cttcggagga 1921 gccaccaatc gcgactgcgt tccaatgctg cccgactcga cggccagcga tctggaccag 1981 cacctgagca gcctggtggg ctcgaccagc ggccagatga cgcaccacag cctgctgggt 2041 gccggcggcc agacgtcgat ctcgtcgacg gtcaacggag gggccagcgg cggcggtggc 2101 agcggtgccg gcggagcagg tgccgccgga gcgggcagcg gcggagcggc gggcggcaat 2161 tcgatcctgg tgccccgcta ccacaccaat gcgagcaacg agtacaatgt gcattccagc 2221 cagaatggac cgcgcagcct ctcggacagc tcccaggcgg aatcgccggt gcaggaggac 2281 ctgctgacca ccaatacccc gaatctgggc agcacggcgg gcggaggagg aggcggtggc 2341 ggtggagcgg gcagcgcatc ggcgggcgga gccgccggca gtggagcgcc tccctcggga 2401 gcaggtgcct ccgtcgtggg caacccctcg atgctgggtg ccaatcagaa tttccccggc 2461 atcgtcaatc aggcccagca ctcggccgcc tcggcctacg gaggcggtgg ctccggtgtg 2521 gtgggcggag gcccccccac cgccggctgc aacggctccc tgtatcccgt gctgccagcc 2581 agcctgctat actcccagct ctacacggcg gccaaccagt ccgcccacgg cttccattcg 2641 cacaccctgc ccgcccacgc ctccccgaac tcctcggtcc acggggagct gcagagcgtc 2701 atggatcaca tcagcaatgt gggagtgagg cagcagcatc acaacatcat ggccggcggg 2761 ggggtcacac atcccgggga tctgacgctg atcgggaact gcggggcctc ggtgaggaat 2821 atcgaggatg gggggaatag caatcggcag gtggccgcct tagctgccca tcgcggccac 2881 cacaatccca ccgacaatgg gggcagcgtt tggaggccct attga