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LOCUS XM_070218605 1683 bp mRNA linear INV 09-DEC-2024 (LOC138913806), mRNA. ACCESSION XM_070218605 VERSION XM_070218605.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1683 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1683 /gene="LOC138913806" /note="uncharacterized LOC138913806; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:138913806" CDS 1..1683 /gene="LOC138913806" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070074706.1" /db_xref="GeneID:138913806" /translation="MAITSNCMGSQMPPSRHIPQSSTAEWCEQMAPYNHGKEEVKSTA LTSQQGDSFSPIEALTQRVSSWTKLVHVVAYVLRFIQRTRTIKLVALTNGARLTFEEI QAARILCLREAQKCFMEDRNLLTENKPLRSRSQLIKLSPFVCKDGLLRVGGRLANSLL PADVKHPILLPKSHRITRMILEHEHRANLHPGVSALFVITRQKYWVFGARNLIRNLVH NCVKCFRQRKITERQFMADLPGIRITEALPFQHSGCDYAGPFILKERRGRNPRKTKGY ICLFVCLVTSAIHLELATDLSTDTFLACLRRFMSLQGKCSQIFSDNGTNFVGAKRALD EMQQHLSSQEHQHTVTQLLANDGIKWSFIPPHSPHWGGKWESSVRSVKLHLRRVVGKT VLTFEQMQTLIVQISAVVNSRPLCYTPDTDITYLSPAHFLIGRPFTTVPEGDLTHLPI NRLDYWQHLQSMYQGFWKRWHQEYLTSLQQRQKWNNKERNIAVGSVVLVKDSNLPPAS WILARVLEAHQGPDGLVRAVKLKTSTGEMTRPITKLAVLPNSETMFQGGPGC" misc_feature 508..684 /gene="LOC138913806" /note="Integrase zinc binding domain; Region: Integrase_H2C2; pfam17921" /db_xref="CDD:465569" misc_feature <826..1104 /gene="LOC138913806" /note="Integrase core domain; Region: rve; pfam00665" /db_xref="CDD:459897" misc_feature 1366..1641 /gene="LOC138913806" /note="Family of unknown function (DUF5641); Region: DUF5641; pfam18701" /db_xref="CDD:465838" ORIGIN 1 atggcgatca catcgaactg catgggttct cagatgcctc catcaaggca tattccgcag 61 tcatctacag cagagtggtg cgagcagatg gcaccgtata accatggcaa ggaagaagtc 121 aagtccaccg cattaaccag tcagcaaggt gactcatttt caccgatcga agcattgact 181 cagcgggtct cgtcctggac aaaattggtc cacgttgtag cttacgtatt acgcttcata 241 caaaggacca ggaccattaa acttgtagcg ctgacaaatg gggccaggct cacctttgaa 301 gagattcagg ctgctcgcat actttgcctg cgtgaggctc agaaatgctt catggaggat 361 cgaaatcttc tgacggaaaa caaaccactt cgcagccgct cccagttgat caagctttca 421 ccgtttgttt gcaaggatgg cctccttcga gttggaggac gcttggccaa ctcgctgtta 481 ccagctgacg tcaaacaccc catattgctt ccgaaatctc accgcattac aaggatgatt 541 ttggaacacg aacatagagc aaatctacat cccggagtgt ctgctctgtt tgtaattacg 601 cgtcaaaagt attgggtttt cggtgcgcgt aacctaataa ggaacctggt acacaactgc 661 gtaaagtgct tccgccaacg taaaatcacc gagcgccaat tcatggccga tctaccaggg 721 attcgtataa cggaggctct tcctttccag cactcaggct gcgactacgc tggaccattc 781 atccttaagg aaaggagagg gcgcaatccc agaaaaacta aaggttacat atgtctcttc 841 gtctgtcttg taacatcagc cattcatttg gaactggcca ccgaccttag cacagacaca 901 ttcctggcat gtcttcggcg tttcatgtcc cttcaaggaa aatgttcgca aatcttcagc 961 gacaacggca cgaattttgt tggtgccaaa cgggctctag atgagatgca gcaacatctc 1021 tcttcgcagg agcatcaaca caccgtaact caattgttgg ccaatgatgg aattaagtgg 1081 agtttcatac ctccccattc gccacattgg ggagggaagt gggagtcatc agtacgatca 1141 gttaaattac atctgagacg cgtcgtgggg aaaactgttc taaccttcga acagatgcaa 1201 actctgattg ttcagatcag tgcggtggtg aactcaagac cgttatgcta cacacctgac 1261 actgacatca cctacttgtc tccggcccat tttttaattg gccgcccatt cacaacggtt 1321 ccagagggtg atctgactca tttgccgatc aatcgcttag actactggca gcatttacaa 1381 tcaatgtacc agggtttttg gaagcgctgg caccaggaat atctaacatc gctgcagcaa 1441 cgtcaaaagt ggaacaacaa ggaacgtaac atcgctgtag gtagtgtagt ccttgtaaag 1501 gactcaaatc tccctccagc atcttggata ctagcccgcg tattggaggc tcatcaggga 1561 ccagatggac tggtacgcgc tgtaaaactt aagacgtcta ctggagagat gacgcgacct 1621 atcactaagt tagctgtgct gcctaattca gaaaccatgt ttcagggcgg cccgggatgt 1681 tga