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LOCUS XM_070218604 8210 bp mRNA linear INV 09-DEC-2024 (LOC108057266), transcript variant X2, mRNA. ACCESSION XM_070218604 VERSION XM_070218604.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8210 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8210 /gene="LOC108057266" /note="uncharacterized LOC108057266; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108057266" CDS 1694..5872 /gene="LOC108057266" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070074705.1" /db_xref="GeneID:108057266" /translation="MDTKLEARGQFPASFPDTFKNFFAMMNEDEDHVGLFANLLEDKV IPRQNSPVQPQRQRYGGSMRSHSGGDRNDRRGRAERQYQQHQQQIQQQQQQQQQQNAQ QQRAFQPRGRSGSGSSIDLYASRNVGFVNTATTSRVNSLRRNRSRGSLTLSSNGLNAL GLGPVTLAPNVSSSSSGSVLDLTLPPGNAAGGSLGAGGSGGSVVAGGSGPNMYASPSK SNLKSALKSTSATVDRGCAILLGSDIKICCLHDEHTINGRQHLQQQLQQQQMSSGQKK HVTLACCECVCGNGQASRSGPDGEDNGGVNYMRGYVAGYQLPQTPKGKPIDKSSTFTS AEVAASKNKDLQERQERQEKRGSVILERAFDFDASCDESDSISSSTQHPVPSPAPHQP AYNVLKPILKQPHQQQQQKVMLQQQHQQVNPQQYQQVTHSHQQHQGIAHQQHQVVTHQ QHHQQQQHLQVGHQQVIHQQHQLSTHPTHPQPMQVHPQVQHPPPGGHVVHRLLPTPPT HSGLGAYHTREAALQRVQQQSGYYNQGPSTSASAYGYNQSMEHQQIQMQMQMQQQLQY DQHQELQFEQHQQHLQHQVHQQQHQHQQYADDTELDYDTEWELDEEPAPQIVPPLTTF NDFVNAAQNPTGSRQSLRAQKSPILNRRRASSIAGNLLHSDYTYTRNSIGGAPIDPND FQRISHSSSARDRMSLAGVLTFQQAMSGAVSPQYGTVGSMNPQASGSGEKKPGMVGAE AMGGGGLPGGSAHNLNLTVGLGFLGGSSTTLAAVAEVTSGPDGNGDSTDSPSPVSMIP TSKQQQQQQKQQQLLQLQLQQEQQLLPTHLPMQRERGVGESSGASTSGTVIADLAASV VLASQSGKPMTERQRLRTSSMPAESRRPRLAEMRRSAIHAGDPDMTYYRLRSFSITSH GICNLGDSLRSRRSRSINSVTSTGTSNSGVDRHNSNASGASGEVIDGDPNVPAYKIAM LGGSGVGKTTLTYQFTTSDYICAYDLSLDDDYGQKTVSVLVDNIETDLEIIDHPACEM STEAFCATYNIDLFVVVYSVIDRNTFAAAERVLQYLKENEMLLSRGAILVANKTDLQR HRVVTRQMGRKVAKDIACKFIETSSGLDHNVDELLVGIVAQVKLNPQRLRLLTELELQ RLNLQSTIQKHRGMHLQTRRMVRQMSVCQGDEEIFDGGLQERLPNGDANGGDPDGVPS TSRASRSRIENPNRKPLNLESILKMGESEVDEEEEAGAGAVKPTPLSKFNMLAATIRH RRPFRKRRSFDGGVSTSAAADAAAELQRRYQLRAMDDLQLEGRLAAEERFGLADSDDE LELEVDGGAEDGAGGGSGGGGVDGGRRNTCNRKVVKKLTARTKVFISSVLRFKKAISL KRRNSSSCSDLFVI" misc_feature 4595..>5098 /gene="LOC108057266" /note="Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases; Region: RGK; cd04148" /db_xref="CDD:206715" misc_feature 4613..4636 /gene="LOC108057266" /note="G1 box; other site" /db_xref="CDD:206715" misc_feature order(4616..4621,4769..4774) /gene="LOC108057266" /note="putative GDI interaction site [polypeptide binding]; other site" /db_xref="CDD:206715" misc_feature order(4619..4639,4763..4765,4772..4774,4937..4942, 4946..4948,5027..5032) /gene="LOC108057266" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206715" misc_feature order(4634..4639,4673..4675,4679..4681,4706..4711, 4754..4759,4763..4765,4769..4774,5033..5035) /gene="LOC108057266" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:206715" misc_feature order(4676..4681,4697..4699,4703..4711) /gene="LOC108057266" /note="putative effector interaction site [active]" /db_xref="CDD:206715" misc_feature order(4676..4699,4703..4708) /gene="LOC108057266" /note="Switch I region; other site" /db_xref="CDD:206715" misc_feature 4682..4684 /gene="LOC108057266" /note="G2 box; other site" /db_xref="CDD:206715" misc_feature 4763..4774 /gene="LOC108057266" /note="G3 box; other site" /db_xref="CDD:206715" misc_feature order(4769..4774,4790..4801,4811..4822) /gene="LOC108057266" /note="Switch II region; other site" /db_xref="CDD:206715" misc_feature 4937..4948 /gene="LOC108057266" /note="G4 box; other site" /db_xref="CDD:206715" misc_feature 5027..5035 /gene="LOC108057266" /note="G5 box; other site" /db_xref="CDD:206715" ORIGIN 1 tgctaaaacg caggtgacag tgcatacttt ccattcacaa aaagcattca ttcaactcgc 61 gaaagtaaaa agagttttgc cccccaggat gatgtggggg acgatgaggg gcagtcggga 121 ttgaagcgtc tacaaaggtg gaaagctctc gcctgccgtc aacaagtggc ttttccaccg 181 cttttccacc cccacagccg gattcacgga agctaccgct tttcttggcc gcgaaccaga 241 tcacatatca gttaaaacat atttacctac gcaaatataa agtgaaaacc atcaaaattc 301 aaataaaata ttggaaatcg atgtcaaaat tgtaaccatc agaaacggaa gtcaagggat 361 cgaagaattc tcaaatcaaa gtcaatggaa atcaaattga gaatcgaaat ttaaacttac 421 catcatatga attgaacttc aaatcaacta gcaagtattc agttattata gataagcctt 481 ttaactaatc aacttattgg tgtgaatact taatctcaaa acaatatatt ctatattaag 541 atgatcttta tgatcgagac tattagatat caagtccgat cattatatac acatattaat 601 caaatattta agaaaaaaac ttcaacataa aaactaaact aaaaatcgat ccaagaagat 661 cacaaaaaaa catatttaaa cattgtagaa taaactcaac ttgattgaaa ctattaagcc 721 catcacgatc actgtctatg aatcaaaatt ttagacaatt taaatttatc aagagtatac 781 ttctattgat ctgttcttaa atacacaaat ataaccaaag aatctataac catttgagaa 841 aagctattga aaatacgctc attactatgt aaacaaaaaa catactaaac atacagaaac 901 aactatttaa atgtaattat taacttacat ttaccttaag atacattgat atctatgaaa 961 aatctaagaa gagcttaaaa tgcatcccat acttgatcgc tactatagcg atctgtttca 1021 gatcaagctt ataacccgat atttgatcga gctgattcgg ttaagaaaga aaaataggca 1081 aaattcccag gagtcgcagt aacggatacg cagttcaaag cgatcttgta tcataaacaa 1141 taaaccaagc gagatcggaa agatctacga aaatattaaa accgaaaata tcgcagtgag 1201 tcgatactgc attgagaaga acttaataat actataaacc ccacttgact ttattaatat 1261 accagcctaa ggacatctca taagagatcc cagatcgata tagaatcgag ttaagaactc 1321 tcagtccaga aactaaaatc caaatcaaaa catattaaaa atcgaattcg agtttgtaaa 1381 tcgcgatcgc gtatcgaaac cttgccgatg ttgtaaatta gatgactttg aatctgattc 1441 ccgacctgaa gccaaatata ttcatcatga gggtccagaa tcgaccagga catgtgatct 1501 aaggacatcg caactagcag ctctctcgct ctcgctgtcc cactctaacc ttgatgcctg 1561 ttctcttctt gcatgttact tggtttgcga cgtcgacgga ccaaaaaaaa aaagtttttt 1621 cattgaagaa ggaaaaaatc aaaaaaaaaa tcagaagaga aagtgagaaa gaaaagagag 1681 tggtagagga gccatggata ccaagttgga ggctcgtggc cagtttccgg cctcgttccc 1741 cgacacgttt aagaacttct ttgcaatgat gaacgaggac gaggatcatg tggggctgtt 1801 tgccaatctg ctggaggata aggtgattcc gcgccaaaac agccccgttc agccgcagcg 1861 gcagaggtac ggcggcagca tgcggagtca cagtggcggc gatcgcaacg atcgaagggg 1921 tcgcgccgaa cggcagtatc agcagcatca gcagcagatc cagcaacagc agcagcaaca 1981 acagcagcag aatgcccagc agcagcgagc ctttcagccg cgcggtcgca gtggcagtgg 2041 cagcagcatc gacctttatg ccagccgaaa tgtaggtttc gtcaacaccg ccaccaccag 2101 ccgggtcaat tcgttgcgca ggaatcgctc gcgaggatcg ctgaccctga gcagcaatgg 2161 gctaaatgct ttgggcttgg gacccgtcac cctggcacca aatgtcagtt caagcagcag 2221 cggcagtgtc ctcgacttga ccctgccacc cggcaatgca gcaggaggat ccttaggagc 2281 aggaggatca ggaggatctg tagttgcagg aggaagtggg ccgaatatgt atgcatcccc 2341 ctcgaaatcg aacctcaagt cggccttgaa gtcaaccagt gccactgtgg atcgcggatg 2401 tgccatcttg cttggcagcg acatcaagat ctgttgtctg cacgatgaac acaccataaa 2461 tggccgccag caccttcagc agcagctcca gcagcaacag atgagctctg gtcagaagaa 2521 gcacgtgacc ctggcctgtt gcgagtgcgt ttgcggcaat ggccaagctt cacgttccgg 2581 acccgatggc gaggacaacg gtggggtgaa ctatatgcga ggatacgtcg caggatacca 2641 gttgccgcaa actcccaagg gcaagcccat cgacaagtcg agcaccttca catccgccga 2701 ggtggcggcc tcgaagaaca aggatctgca ggagcgccag gagcggcagg agaagcgtgg 2761 atcggtcatt ctcgagaggg cctttgattt cgacgccagc tgcgacgaga gtgacagcat 2821 aagcagcagc acccagcatc cggtgccctc gccggctccc caccagccgg cctacaatgt 2881 cctcaagccg atcttgaagc agccgcatca gcagcagcaa cagaaggtga tgttgcagca 2941 gcaacatcaa caggtaaatc cacagcagta tcaacaggtg acccattccc atcagcaaca 3001 ccaggggatt gcgcaccagc agcatcaagt ggtgacccat cagcaacatc accagcagca 3061 gcagcatcta caggttggcc accagcaggt gatccatcag cagcaccaac tgtccaccca 3121 tccgacgcac ccacagccca tgcaggtgca cccacaggtg cagcatccgc cccctggcgg 3181 tcatgtggtg caccgcctgc tgcccacacc gcccacacac agtggcttgg gtgcctacca 3241 cacccgtgag gcggccttgc aacgggtgca gcagcagagc ggctactaca accaagggcc 3301 cagcacctcg gcatcggcct acggctacaa ccagtccatg gagcatcagc agatacagat 3361 gcaaatgcag atgcagcagc agttgcagta cgatcagcac caggaactgc agttcgagca 3421 acatcagcaa catctgcaac atcaggtaca tcagcagcag catcagcatc agcagtacgc 3481 cgacgatacc gagttggatt acgataccga gtgggaattg gacgaggagc ctgctcctca 3541 gattgtcccg ccactcacca ccttcaatga ttttgtcaac gcggcccaga atccaactgg 3601 cagtcgtcag agtctgaggg cccagaagtc cccgattttg aacagacgtc gcgcctcatc 3661 gatagccgga aatttattgc actcggatta tacgtacaca cggaacagta tcggcggagc 3721 tccgatcgac cccaacgatt ttcaacggat ttcccacagc agcagcgcca gggatcgcat 3781 gtctctggcc ggagttttga cctttcagca ggccatgtcc ggagcggtct caccacaata 3841 tggcaccgtg ggctcaatga atccccaggc ttccggttcc ggtgagaaga aacccggaat 3901 ggtgggagcc gaggccatgg gtggtggtgg tctacccggc ggatcggcac ataatctaaa 3961 tttgaccgtg ggcttggggt ttctcggtgg atcaagcacc accttagctg ctgtcgccga 4021 ggtgactagt ggaccggatg gcaatggcga ctccaccgac tccccatcgc cggtctccat 4081 gatcccgacc agcaagcagc agcagcaaca gcagaagcag cagcagctac tgcagttgca 4141 gttgcagcag gagcagcagc ttttgcccac ccacttgcca atgcagcggg aacgaggcgt 4201 gggcgaatcc tcgggagcca gcacttcagg caccgtcatc gccgatctgg ccgcctccgt 4261 ggtcttggcc tcccagtccg gaaaacccat gaccgagcga cagcgcttga ggacctccag 4321 catgccggca gaaagtcgca ggccccgcct ggcggagatg cgacgctcgg ccatccatgc 4381 cggtgatccg gacatgacat actaccgtct gcgtagcttc agcatcactt cgcatggcat 4441 ctgcaacctg ggcgattccc taagaagccg caggtcacgt tcgatcaatt ccgtgacttc 4501 cacgggtact tcaaacagcg gcgtggatcg acacaatagc aacgcatcgg gggcatcggg 4561 cgaagtcatc gacggggatc ccaatgtgcc cgcctacaaa attgccatgc tcggcggctc 4621 cggagtgggc aaaaccacac tgacttacca attcaccact tccgattaca tttgcgcata 4681 cgacctgagt ctcgatgatg attatggaca gaagacggta tcggtgctag tcgataacat 4741 tgaaacggat ttggaaatta ttgatcatcc cgcatgcgag atgtcgacgg aggccttctg 4801 cgcaacctac aacatcgacc tcttcgtggt ggtctactcg gtgatagatc gcaacacttt 4861 cgcggcggcc gagcgggtcc tgcagtatct caaggagaac gagatgctct tgtcacgcgg 4921 agccattttg gtggccaaca aaacggattt gcagcgccat cgcgtcgtta cacgtcaaat 4981 gggccgcaag gtggccaaag atatagcttg caaatttatc gagacttcat ctggtttgga 5041 ccacaatgtg gacgagctgc tggtcggcat tgtggcccag gtgaagctca atccgcagcg 5101 gctgcgattg ctaacggagc tggagctgca gcggctgaac ttgcagagta cgatccagaa 5161 gcaccgcggc atgcacttgc agacgcggcg aatggtccgc cagatgagcg tctgccaggg 5221 cgacgaggag atcttcgatg gcggattgca ggagagattg ccgaacggcg acgccaacgg 5281 cggcgatccg gacggagtgc ctagcacgtc gagggcgagc cggtcgcgga tcgagaatcc 5341 caaccgcaag cccctcaacc tggagagcat tctgaagatg ggcgagagcg aggtggacga 5401 ggaggaggag gcgggggcgg gggcggtcaa gccgacgccc ctcagcaaat tcaatatgct 5461 cgcggccact atacggcatc ggcgtccgtt tcgcaagcgt cgctcgttcg acggcggcgt 5521 ttccacatct gccgcagcgg atgcggccgc cgagctgcag cggcgctatc agctccgggc 5581 gatggatgat ttgcagctgg agggacgatt ggcggcggag gagcgattcg gtctggctga 5641 cagcgatgat gagttggagc tggaggtgga cggaggtgcc gaggacggag caggaggagg 5701 atcaggagga ggaggagtcg atggtggacg aaggaatacc tgcaaccgca aggtggtcaa 5761 gaaactgacc gcccgcacca aggtattcat ctcgtcggtg ctgcgcttca agaaggccat 5821 cagcctcaag cggcgcaact cctccagctg cagcgatcta ttcgtgattt aagcagctcg 5881 aggagctgag atagtatagg aagtaggaag tatagactga atgtacatag aaggaatata 5941 gaaggaggag tattatcgag aagtagcagg aacacgggaa caggagcagt agcaggagca 6001 ggagatccag ggatccagag accaagagag caggcacaac gaaaaagcag cgcaaaccgc 6061 ggtggagtcg aacacggaag tgcagggagt gcagaaggtc agcttatgag gaagtcatcc 6121 agtttagtag ccctcaaaga aaattacagg gacacacaca acatcatacg ttttgagagg 6181 tcagcggaca attgcagtat tagaccttta tatttttcat tgtttaaagg gcagctgcaa 6241 ttggtctgcc aaaagcgacc caaataaaat tgtaaagcaa aaactattgc caaagaaata 6301 tctagagatt ttgaaacccg ctttaaaagg tagctaaaag tgtattttag aaaaaaactt 6361 gtcttccggt ggttatattt gcaacttccg gataaaaaaa tgaattgcat acttaaaggg 6421 acctttttaa gtgatttcaa acctttagat tttgatgctg gctaatcgaa acaaaacaca 6481 ctccttttca ccccaaaccg aaccggtagg tggcgctgca atgcggacaa taattttctt 6541 gacaaacaaa aaatattgat cagcaaattt tacaaaatcg aaaatctaaa aaaagaagag 6601 aggtaaacat tttatgcaaa tgaaaaccga gtcctatccg ctaaaaaaaa tttgtaatgc 6661 agcaaaaaaa gaaaacaaca aaaaaactgg cgatttgtta agtggcacat gctttttgag 6721 aaacaggaaa caaccgcaaa ggcaatatat aaagggatac taacacaaaa tactgcaccc 6781 attttgatgt cgtttttttt tgaggtttct tgtcataatt aaacgcgtgg tttctggcga 6841 gtttcaagca taaaaggaat ggaccttaca acacatatag acagactaga tgaacatgga 6901 taggtagcta aagacaatgg ataaacgtgc aaaaacggaa acgatttttt ttagtcagac 6961 catgaaatat tgataaaggc aaagaaaata aataagaaaa aaacaaacaa aaagagcagt 7021 gcaaaattgt ttacaccatt gcaaacttta caaccttttt tatggtggca cgccttttaa 7081 tgaaattcga tttcattgtg ccaacggtcc agcttaattg ctcaaatatt aaaacacctt 7141 ttactatatt ggatacattt aaattattta cttacattta catttctttg tgatagtctt 7201 atagttgctt cttcactgga ccttccatta ccaatgtggg taatatatgt attgaaatac 7261 ttattttttc tatatgttta cttactataa atgcaatgtg agagttcttt ggaaaacctg 7321 ctgctcgttt ggctattgcc gaaatacgat atatatttaa aacataattg tctagcgcca 7381 agtttataag aaggaagaac aatttttttt gcgcgcacta tatcaagaaa tagacatata 7441 agtattttac acttctaaat gtcgtgtggt aaagaatacc gaaaatacac ataaaatcat 7501 cagcactacg aacacaacaa caagaacaat cagaaaacaa gtttagatgc aaatgtagag 7561 agcataaaat atatcaggcc agcccgtgaa ggtagtcctt gtttttctgg aattcctttc 7621 tgcgagaaaa aaatttggta tagaatattt ggaacaatgt tgtcccataa aatatttgtt 7681 aaacatttat aaaggaatcc agagaaaatg gtattgcctg tgttggcgcc cgagcaggga 7741 cttacctggg gctaggcatc atattacaca taaaatattc aatattaaga acttatcaat 7801 gttaagcgat atcagcaaaa atgagcaact attcatatcg catcaaatct ctgttgaaat 7861 ggctgagggg aaataaaaac ctgcacgccc cctaagtttc cccggctccc ttttcaattc 7921 cgtcggtcga tggaactcaa ggcagtcaag caaaaacctt aatgagctta accaaagcct 7981 gcaatactgt ctcgaaatgg aaaaggccat gaaagtatgg atgcagaagg gtggtcgtgc 8041 gagtttccta gaagctacta ccaaccgcaa actaacgcaa attacatagc aaaaggatac 8101 aaaaggttct ctagcagaag gtgttttaag aaaacggcag gttattgatt atattaattt 8161 gatttttaat tttataaaac accacagaat tatgaaatca attatgttca