Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218588 8860 bp mRNA linear INV 09-DEC-2024 transcript variant X6, mRNA. ACCESSION XM_070218588 VERSION XM_070218588.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8860 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8860 /gene="Imp" /note="IGF-II mRNA-binding protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108060857" CDS 1332..3056 /gene="Imp" /codon_start=1 /product="insulin-like growth factor 2 mRNA-binding protein 1 isoform X3" /protein_id="XP_070074689.1" /db_xref="GeneID:108060857" /translation="MASELDQFADLELSKEDREQIFDPPLDRQQLEGAGTSRAAGGLN GVEFEGSKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGR QGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEALST NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVK GLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMP FPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMRFSNA SLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTVE LLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSV QSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAATSGSQQQQQPQSPSQQQ ALPPQLHHQPVSSASSSSTPPAHHQQQASTAASAHQLQQQQQPSPPPPGNATAAAAQQ QQLASSQQ" misc_feature 1587..1790 /gene="Imp" /note="first type I K homology (KH) RNA-binding domain found in the insulin-like growth factor 2 mRNA-binding protein (IGF2BP) family; Region: KH-I_IGF2BP_rpt1; cd22400" /db_xref="CDD:411828" misc_feature order(1611..1613,1617..1625,1629..1643,1650..1655, 1662..1667,1680..1691) /gene="Imp" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:411828" misc_feature 1827..2042 /gene="Imp" /note="second type I K homology (KH) RNA-binding domain found in the insulin-like growth factor 2 mRNA-binding protein (IGF2BP) family; Region: KH-I_IGF2BP_rpt2; cd22401" /db_xref="CDD:411829" misc_feature order(1851..1853,1857..1865,1869..1883,1890..1895, 1902..1907,1920..1931) /gene="Imp" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:411829" misc_feature 2238..2447 /gene="Imp" /note="third type I K homology (KH) RNA-binding domain found in the insulin-like growth factor 2 mRNA-binding protein (IGF2BP) family; Region: KH-I_IGF2BP_rpt3; cd22402" /db_xref="CDD:411830" misc_feature order(2271..2279,2283..2297,2304..2309,2337..2351, 2388..2390) /gene="Imp" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:411830" misc_feature 2499..2705 /gene="Imp" /note="fourth type I K homology (KH) RNA-binding domain found in the insulin-like growth factor 2 mRNA-binding protein (IGF2BP) family; Region: KH-I_IGF2BP_rpt4; cd22403" /db_xref="CDD:411831" misc_feature order(2532..2537,2541..2555,2562..2564,2595..2612, 2622..2624) /gene="Imp" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:411831" polyA_site 8860 /gene="Imp" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctgtcaaacc cagctgccaa aaggccccta caaattttca ctttctcaca attctgtttc 61 aatttttttc tcgctcaaaa aaaatcaaaa atttacccaa aatcaaaaat atacactcac 121 acagaccata acaagacaag ataccgaaaa acaaataaca aaacccaaac aaaataaaac 181 cagaagaaag caaagtaaag caaaggaaag gaaaggaagg caaaggaaag gagaaaggaa 241 cgaggggcac atgaacagat cgaaatccaa ccgattcact atctctcatc aattaaaaat 301 cgttcatagg tttaacatcc aaccaaagga tcttcacgag ccccctgatt cttgatctta 361 gagtcctatc ccaagaaaag agccaaagaa aagccgcagg actctcaaat tccccgaaaa 421 ttagcgacgt ccaccgatga gggtagaacc gaaaaccgat aaccagaaat tggaaactta 481 ggaggatcaa tagccaggaa agagtcgaga tctcgggagt atcgtttata gaaccttagc 541 ctcaagcagt ttcaacccac atcctatcta tcaatcaatc ggaggtcagc ggttcagcca 601 actgaatcta taactctttt ttttggccca attgacacca aaaacaaaca acaacaaaca 661 aaaagaaaac aaaaaaccac aaaccactaa tgtaactttt tttgaagccc acaaaaagga 721 cgagttaaaa gaaaacgcaa cgtttcgagc taaaaaagtt taaattaaac gccccgaaaa 781 aatcgtaaaa gacagttgcg aaaagccgtg aaaaatcaaa ataagaaatg caaacgcgac 841 tttaatacaa atccactgac gaacgcttgc taaacgcttt tttcccggtt cagcagaggt 901 cagcaaaact ttcgactcgg cagaaatata taaaaattac ccaaaaaaaa aattaaaaac 961 ctattacaaa cgtaaaatcc gtcaaggaca tgagtcaatc gagtaattga gcgcgctaaa 1021 ttcaaaaagt catcattcca cacgtaacaa ccgaaaaaga aacgaaaaag agttgaagca 1081 ggagtaagaa gaagacaagc tgaaaaatac aaatatataa tattaaagat cgatttcgaa 1141 atctccgaaa cgcgttttcg aaagccacct tcaaattcta aagtgttcga gcagcaaacc 1201 tcggtttcag gcagtcctag gctatccccc cggatttata tatatataat atatatccga 1261 tcgactcacc aaccccgaag gtaaacctca aaaacacacg cacacttaac caaaaaaaag 1321 agctaccgaa aatggcatcc gaactggatc aattcgccga cctggaactt tcaaaggagg 1381 atcgtgaaca gatcttcgat ccgccactgg atcgacagca gttggaaggt gctggcacct 1441 caagagctgc tggtggtctg aacggtgtcg agttcgaggg cagcaagctg catgccgagc 1501 agctggacaa gaaccagcgg cgtagccagc gcaaccagcg caatccgtac ccgggaatgc 1561 ccggccccgg acgccaggcg gacttcccgc tgcgcatcct ggtgcagagc gagatggtgg 1621 gcgccatcat tggccgccag ggcagcacca tcaggacgat cacacaacag agccgtgctc 1681 gcgtcgatgt ccatcgcaag gagaacgttg gatcgctgga gaagtcgatc acgatctatg 1741 gcaatccgga gaactgcacc aatgcctgca agcgcatcct ggaggtgatg cagcaagagg 1801 ccctctccac gaataaggga gaaatttgcc tcaaaatact cgcccacaac aacttgattg 1861 gacggatcat tggcaagtcg ggcaacacca ttaagcggat catgcaggac accgatacga 1921 agatcaccgt cagctcgatc aacgacatca acagcttcaa tctggagcgc atcatcacgg 1981 tcaagggatt gattgagaac atgtcgcgtg ccgagaacca gattagcacc aaactgcgcc 2041 agagctacga gaacgacctg caggcgatgg cgccgcagag cctcatgttc cccggtctcc 2101 atcccatggc aatgatgtcg acaccgggca acggcatggt cttcaatacg agcatgccgt 2161 tcccctcgtg tcaaagcttt gccatgtcca agaccccggc cagcgtggtt ccgccggtct 2221 tccccaacga cctgcaggag accacctatc tctacatacc gaacaacgct gtcggcgcca 2281 ttatcggcac caagggctcg cacatccgca gcatcatgcg cttctcgaac gcatccctca 2341 aaatagcccc cctcgacgcc gacaagccgc tggaccagca aacggagcgc aaggtgacga 2401 ttgttggcac accggagggt cagtggaagg cgcagtacat gatcttcgag aagatgcgcg 2461 aggagggctt tatgtgcggc acggacgatg tgcgcctaac ggttgagttg ctagtggcca 2521 gctctcaggt gggccgcatt attggtaagg gcggccagaa tgttcgcgaa ttgcagcgcg 2581 tgacgggcag tgtgatcaag ttgcctgagc acgctttggc gcctccctcc ggcggagatg 2641 aggagacacc ggtgcacatc atcggacctt tctacagcgt acagtctgca cagcgacgca 2701 ttcgagccat gatgctatcc acaaatccgc cgccaatcac caaaaaacag aaagctgcca 2761 aagaacaatt gcaacaacag caacagagcc tagccggagc tgcgaccagc gggtctcagc 2821 agcagcagca gccacagtca ccatcgcaac agcaggcgct gccgccgcaa ttgcatcatc 2881 agcctgtgtc gtcggcgtcg tcatcgtcga cgccacctgc acaccatcag cagcaggcgt 2941 cgacggcagc gagcgcccac cagttgcagc agcagcagca gccatcgccg ccgccacctg 3001 gcaatgcaac tgcggccgca gcccagcagc agcagctggc tagctcacag cagtaaggag 3061 gaaggaatca ccgatgaagg agtgccggcg ccgcagcaga aacatcaaca gcagcagcaa 3121 caacaacagc agcagaagca gcagcagcag cgacagcgcc aacaatagcc aaggcagggt 3181 tttctactat tgatactacc tccacaacaa cacacccata atcttcaaac ccccccagcc 3241 caagaaccac ccaaaattta caaccctata attacaagct aaccgtaggc gccacctttg 3301 tgctggcaca ggcgacggca aaagtaagca aacaacctgg agcagtaaca taaacaaaaa 3361 atcatataca tatatatata tatataatag gggaacaact acatcaaaaa aaaaaaagtg 3421 agccgcgtga agaagctcta ctagttcata acagtgtaat gcaactttaa caagaagaac 3481 atcaatcaaa cacacacagc aagaataacc ataacaacat tcttcatttg catactaaga 3541 aataaagaga aaaccttaaa tagaaagcgc tatcgttcgc ccgaaccact aagcagcaac 3601 aactaaaaaa caaactttgt gttgttgttc gttcgttctg ttaggtgtaa acttttgtgt 3661 cgactgagaa tttgaattcg acaccgccca aacagtttaa tcatttttac aaaagtaaac 3721 aatattttca acaaccatta aacaacaaca caaagagtga aagtaactaa agagaaaacc 3781 ccccaaaact aacaacccca caaatttgaa tgcaagaagg gaattaaagg ataaaggagg 3841 aaagtttagt agtgtatgcg ttatattttt tttaaatata tttaactata aaacgtttat 3901 ttttaattat ttttttttaa caaagattta gtaagcttat atttaagtgg aaagaacaga 3961 aggagagaag tgagcaaagc gaaagagaat gagattgaga atcgagcaga gaaaaaaaac 4021 gagagggaca aacgttagtt tgatcccaag agaaccgaaa attgtacaca aacagaacat 4081 ataaccaaga aatatcaaaa aaaaaaaaga gaaaattaca atacagacat ggaaagcaac 4141 agaagcgtca gaaaacacaa atatatacct attttgagcc cacatccaca acaacaacaa 4201 caaaggtgaa gaaagtttcc aacgagcact catttctggg ttataaaaat gtataacagt 4261 tgataaagtt atgtgtacaa tgtgcgacag ttgatgcaac tgttggcgcc ccttacgtta 4321 tacgtagtat aacagacctc aacccaaaac ccaaaccacc aaaaagaaac aactatctat 4381 gtatacaata tcgttaagag ctgtactgga tactggatgg attgatggat ggatcagtgt 4441 gtatattggg actatattga taggaaggga tgcggatgga accagaaacg ccagcgagag 4501 caatgtttac tgtactgtac agctgtaaaa tagttttttc gatgcctaaa acgttgtatg 4561 tatatgaatg gatacgtatg gatacggaga ccagtcattt tttttgcgag ggaaagagtt 4621 acatgaattg ttgattatac ttagtgcgaa agcagccgaa ggagacatac ataaggacgg 4681 agatggagat aggaacgcta aagatgatag tgttaaagaa aactattgta atgtgtttgc 4741 cttgaaatga aaacaaaact aactagaaat gaaataacgg tgctgaaatg ttaatttttt 4801 ttaatcgatc gttaacgtta agtgttacgt tataacgttt gagcgtgtat gagagacaag 4861 ctgttatacg aggatgggac actgcactac acaagaatat aaacctaaac ccaaaaccca 4921 aacctatacc agccaatctg aacccaaatc aaagtctaat tcatagccac aaagcaatca 4981 aaaccggagg atgcatttcg tagagatcgt aatcgtagcg taaacagatg aacagacaat 5041 atatttaacc atatgaccaa acaccatagc tagaggccgc aacccaagta actgaatcgg 5101 agcaacaaca atcaaactac aatctacacc agccaaaaca agcaacaata gcaatagccc 5161 aattttgtgt tgtttttaaa tagctattat ccaattagta accatacaat ttttttattt 5221 tttcttctaa cgtaaatatt taactaattg atattccata gagttaatgt tacaaactag 5281 tgggacgtac agtcaaccaa atcaaatcga attgaacacc caatccctag cgatccaatc 5341 cttttgtttg tataacactt gcttcgaagg cagacagttt caaaacacca catgaaaatc 5401 aaggcaaatt cgacatttcg gcaaaacaaa cagcaaacct ataaaaaaat tcaacatttc 5461 ggtctaacaa gcaacaacaa aactaaaaac ttttgagcgg cacattattt tggatgaaca 5521 aaagataaga tgaacaaaat ttttggacaa aaactcaaag ccaacaagaa gcgtgtacaa 5581 gctttaggac agcccaattt tttgaaatat cacactttct ttgttctttt tcacgaagaa 5641 acaaaagaaa acaagcaaaa gcagaaaaga tgaagaaatt tgaagaagat tgaaaaagta 5701 attaaaatac ctcaatgtaa gtgcattatc ttctacaaaa aaatataaaa aaatatgact 5761 aaaactaaaa acaaacttgc aaagcgtaaa aatggataaa aatgcaaaaa aaaatcctaa 5821 tgagagaaaa cgaattatga aaagccaacc ctaaaaataa atgtagatta taagcaaaca 5881 aataaaagaa ctattaatga atgaatcaaa caatacgaat ctaaacagaa ccggaatcag 5941 caaaacaagc attggagaag gcatatcacc aagtcacaga agaaacaaac gcatttcgac 6001 gagaagtctt ctgaaagaca aatgcaggcg aatagatatt ttaccaaaag tttctataag 6061 caaaaatcaa atccgaaccg aaactaattc aaatcaaata aaacccacag cgaccaatca 6121 aacaatcaca cacccaccaa agcccttcgc gaaatagttt tgggtcaaac tccccaccca 6181 ggccatatgt accataccaa ctgaagcaga tcaacctaga acagagggat ataggagata 6241 tgagatatag gatgagcagg atgcgattag gagggatggg aagtgtatat aagaatgttg 6301 cggggcatta acattgatct ttatatacga gaaatcaggc cgctgtatat gtatatatat 6361 gcgatatata tgtgtatgtt gaaaatgcgt gacattttgt tttgttatac ttgagaatct 6421 atatatgtat atctatatat atatatatgt atataaatct aataaatttc ccctcttgtt 6481 tataacgaat aattattcaa gctaattata ccccttttat ttttttccat ggaaaaatgt 6541 ccaaagttgt caatataaag acatttacat atacatatat atctatatat agatatgtgg 6601 atctatgctt aaatacgata tttataaaga agaaggaacg gaatttttct aaaagattcc 6661 aaacaggaaa gaacaaagaa atgaaaatta ttattccaaa tgctgaatca aaggaaagtc 6721 agatcgatga tcgattatcg ctgatcgatg aaagggatga gttaataatt tagctatagc 6781 tctggtttat tttgacgggg ggttaaacgc gataaaagat acaaataata taactgatga 6841 cagagatcga cggaaacaac tgaaaacttg tgagttagcg tgcgcgttaa aaacgaaaac 6901 aaagataaga ataaagataa tgataatgat gtagaaagag aactcagttg aagaacgaag 6961 aacgaagaga gaggaaagcg attgtgagaa gtgtgaaaag cagaaacgaa attatttttt 7021 agtatttaga ggctatttta tatcgttatt aaagcaggta ggaaagtgag gcaacggtta 7081 ggaaaagagc tgagatgata aagatgatga tgatgaggga aaaataccag cagtaaaagc 7141 gaaaaatgaa tggcagttta gcgagaaagt taaattttaa ccaaatggga aatcgaaaga 7201 atagggcaag actcgaaaaa ccaaaactgg catgggtgta gtgtagcatt tagcatttcg 7261 aaatcccgaa taccaaatcc cagagtacag tcgacaccaa atgtacaaag cttttggcgt 7321 acaatctact tacaaggttg ctaccagttc taaacattgc attttactat ttactacaat 7381 ccagtttcta tttttcaaac atttctccaa cactcatgcc gattttgtac agtttttctt 7441 tccgcagaac gttaaattga gggaaaaaac attgtaaaag agaaaaagaa taatgagaaa 7501 agtacttttt tgtgttgtaa gttgtgccaa gtactgataa cgtttaaggt gtgataaact 7561 cgtttttaaa tttaacaact atttaaacta taaaaactac ttactaaaac aaaacaaaaa 7621 aaaattaaaa tttataaaaa aaaaacactt attatttaac aacaaaaaat gcttttgatg 7681 tacattttat acacaaacac acacacacac gcgcaagaac caacattaca aaaacacaca 7741 ccaacccaca aaagtacttt gacagccgat ttcttttggg aatagggaat aggaaaagac 7801 aggaatagaa accctaaaaa catcaatcaa aaacaaaaac acgtacatat aaaatcaaca 7861 acaacaattt gctttgctac cggaattcag aagatttaat ttaattttga tttataaata 7921 taatttaaca taaaacaaaa gcaaacaagt ttgtactctt tagaaatgca gtgaaaagga 7981 agtgaaagga caaagaggta atcgatgtcg atgaaaaaac gataaactct ttacaagcat 8041 aaaaaatgtt atgaaacacg gattaaggga agaatacttt tttaaaaagg aatatttttt 8101 tatatatgta catatatata aatatttaca aaggaaaact aaacgaaagg aagggaaaaa 8161 cgtttttagc ggtacaaaca tgagtacaaa tcaagtttta ttattttttt aaatattttt 8221 ttttgtctat tatgagagtg gaaatttacc tatcggaagg agttttcttt aggcatatac 8281 aaaaaaaccg agttgttttt tttcttcaat tgttaggcgc gtaaaagtta gagcgagaca 8341 gcagcagcag ccgaattagg tagccagaca gagagaggaa cagttgatta atgagacatt 8401 ctattaaagc gaagataagg attaacgata gggataacga tataaagcga gtttaaccat 8461 aagtcaagct tgacaaccga tcagccacga gcagaaacag caaacataga gcagaaagca 8521 gaagaacagg cagagaaccg ttagccacgc agagaaagca ggaagaaagc acgaagaaac 8581 aagagcaaat agcccaaaaa gccaagccgc cactcacaca gtgaaaatga gaatatgaat 8641 atgaaaataa cgaaaatcgc aagtaaaatt cgaggattag gcaatcctag cgaaggagaa 8701 acagcacaaa tttaatcgat acaaattggg ggttcattat tttttagttt cgaaaagaaa 8761 tttggacgca aaatcagcca gaatccaaag cagccggaaa aagttaaaaa gaaaaacaag 8821 tcagaagtca gaaagtcaga aaaaacaggc agaaaagatc