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LOCUS XM_070218584 2841 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_070218584 VERSION XM_070218584.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2841 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2841 /gene="Pkcdelta" /note="Protein kinase C delta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108062965" CDS 390..2426 /gene="Pkcdelta" /codon_start=1 /product="putative protein kinase C delta type homolog isoform X2" /protein_id="XP_070074685.1" /db_xref="GeneID:108062965" /translation="MMFTRAQVRKQKTTNSSSQRPRSSGGSSSRHETRYKQSSTSSSG AGSGLSGSSGTSGARRDQYRDRDHYGKHSFELPRQHSKEEAYHRDRDRDRDRESSAGG AERGDRSGIGGNGGGVTGGGVYVDRRTRPRSITNRRGAIKHQKTHDINGHRFVAKFFR QPTFCAFCNLFLWGFGKQGYQCIICQTVVHKKCHEKLLGKCSGSVFTSASTILLRERF KIDMPHRFKPHTFMSPTFCDHCGSLMGGFFIQGLKCEECDVNCHKKCERLTANLCGVN QKLIVEALNHVKRGAREARDSPSTPPSLNPAYKIEANEEHDETSYTYSQFQKSGRFTA PATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDV DSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEER ARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADS FCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIP WFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPP FKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNPHITLD" misc_feature 822..1001 /gene="Pkcdelta" /note="first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt1; cd20834" /db_xref="CDD:410384" misc_feature order(858..878,900..914,921..923) /gene="Pkcdelta" /note="putative DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410384" misc_feature 1059..1208 /gene="Pkcdelta" /note="second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt2; cd20837" /db_xref="CDD:410387" misc_feature order(1074..1094,1116..1130,1137..1139) /gene="Pkcdelta" /note="DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410387" misc_feature 1449..2408 /gene="Pkcdelta" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature order(1455..1466,1473..1475,1479..1481,1518..1520, 1524..1526,1623..1625,1671..1682,1809..1811,1821..1826, 1830..1832,1860..1865) /gene="Pkcdelta" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270870" polyA_site 2841 /gene="Pkcdelta" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcccgtgcga acgcagcggc caaacagagc ggaagaatcc gcgttgacgt tgtatctttg 61 tatctgacag atactcgaat ctatttatta ttactttctg cggctggcct tttgtattgt 121 tccacgttgt tgccatttcg atatctgtca acggggcttt aaacctggcc aacagtcgcg 181 gcaaagatgc cagtacacca aaagcaggat acaacataca gctgactaaa aatgcgagct 241 gtttatttaa tataaatata tagaagaaaa cgccttgtac tcggcaaaag tccgctagcg 301 aaacacaaac cagaagcccg aaatacttgc ggggagatca tatctcgaat gtggatgtgc 361 atttgggggt ggaaccggga gaccacaaga tgatgttcac acgtgcccag gtgcgcaaac 421 agaagaccac caactcgagc agccagcgac ctcgcagctc gggaggatca tcgtcccgcc 481 acgagactcg ctacaagcag agctccacca gcagtagtgg agcaggcagt ggtctgagtg 541 gcagcagcgg cacctcgggt gcccggaggg atcaataccg ggacagggat cactatggaa 601 agcattcctt cgagctgccg cgccagcact ccaaggagga ggcctatcac cgggatcggg 661 acagagatcg ggatcgggag agtagtgccg gcggtgcaga aaggggcgat cgaagtggca 721 ttggtggcaa cggtggtggc gttactggcg gcggcgtcta tgtggacagg agaacccgcc 781 cgaggagcat taccaatcgt cgcggggcca ttaagcacca gaaaacccac gacatcaatg 841 gccatcgttt tgtggcgaaa ttctttcgcc agcccacctt ttgtgccttt tgtaatttgt 901 ttctttgggg atttggcaag cagggctatc agtgcataat ttgccagacg gttgtgcata 961 aaaagtgcca tgaaaagctg ttgggcaaat gttccggttc cgttttcacc tcggccagta 1021 caattttact gcgcgaacgt ttcaagatcg atatgccaca tcgtttcaag ccccacactt 1081 ttatgtcacc cactttttgt gaccattgcg gatcgttgat ggggggattt tttattcagg 1141 gccttaaatg tgaagaatgt gacgtgaatt gtcacaagaa atgcgagcgg ctcacggcca 1201 atttatgcgg tgtcaatcag aaactcatcg tcgaggcact caaccacgtg aagcgaggag 1261 ccagagaagc ccgtgactcg cccagtacac cgcccagttt gaatccagcc tataaaatcg 1321 aggccaacga agaacacgat gaaacatcat atacatattc acaattccaa aaatccggac 1381 gtttcactgc gccagcaaca gtaataccta gatttaagaa ttattcggta gatgatttcc 1441 actttctggc cgttcttggc aaaggaagtt ttggcaaggt tctgctggct gagctgcgtg 1501 ataccacgta ctactatgcc atcaagtgcc tgaagaagga tgtcgtcctg gaggacgacg 1561 atgtggactc gacgcttatt gaacgcaagg tcctggcgct gggcaccaaa catccctatc 1621 tgtgtcatct gttttgcacc ttccaaacgg agagccactt gttctttgtg atggagtatc 1681 taaatggcgg tgatctcatg ttccacatcc aggagagcgg tcgcttttcc gaggagcggg 1741 ccagattcta tggagccgaa ataatctcgg gcctcaagtt cctgcacaaa aagggcatta 1801 tctataggga tctcaaactg gataatgtcc tgctggacta cgagggacat gtgcgaattg 1861 ccgactttgg catgtgcaaa ttgcaaatct atttggacaa gacggccgat agcttttgcg 1921 gcacacccga ttatatggcg cccgaaatca taaagggtga aaagtacaat cagaatgtgg 1981 attggtggtc gttcggtgtg ctgctctacg aaatgctgat cggacagtca ccattcagtg 2041 gctgcgatga ggacgagctc ttctggtcca tttgcaatga aattccatgg ttcccagtct 2101 atatatccgc cgaggccacc ggaatactca aggggttgct ggagaaggac tatacgaagc 2161 gtattggctc gcaatatagt ccagctggtg atatagctga tcatatattc ttccgcccga 2221 tcgactgggg attactggaa aagcggcaaa tcgaaccgcc cttcaagccc caagtgaaac 2281 accccctgga tacgcaatat ttcgaccggg tctttaccag ggagcgggtg cgactcaccc 2341 ccatcgataa ggagatacta gcctccatgg accagaagca gttccacggc ttcacctaca 2401 caaatcctca catcaccctg gactaaatct taattaatac tatcctaatt aattatttag 2461 agcaacagta tttgtatatg taaatattta ttatggaaca aaaaaaaaac aaagattaac 2521 aaacgaatat ggaaaaggaa atcgaaattt taataccttt tagctaagcc ttaaaaccca 2581 cttaaaaatt tgagcgtaat tctagtcagt tagctttact tctatgtcta agtctaattg 2641 tacagatatc cctcctcata tttacctata tactatatac ctatgcatat atatcttttt 2701 ttttcgcaaa ttatatttgt tctgaatttt agcggctaag caaaaagtct acgtctatga 2761 gaaataaaaa actaagaaat ttaaaaaaat aatgcggcta tggaaaaatg gttgttgaat 2821 aaaaacaatg tgtcaatcag a