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LOCUS XM_070218582 2776 bp mRNA linear INV 09-DEC-2024 ariadne-1 (ari-1), transcript variant X2, mRNA. ACCESSION XM_070218582 VERSION XM_070218582.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2776 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2776 /gene="ari-1" /note="E3 ubiquitin-protein ligase ariadne-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108066942" CDS 520..2034 /gene="ari-1" /codon_start=1 /product="E3 ubiquitin-protein ligase ariadne-1" /protein_id="XP_070074683.1" /db_xref="GeneID:108066942" /translation="MDSDNDNDFCDNVDSGNVSSGDDGDDDFGMEVDLPSSAERQLDQ DDYQYKVLTTDEIVQHQREIIDDVNLLLKLPTPITRILLNHFKWDKEKLLEKYFDDNN TEEFFKCAHVINPNNATEAVRQTTTRSQCEECEICFSLLPPDSMTGLECGHRFCMICW REYLTTKIVTEGLGQTISCAAHGCDILVDDVTVTRLVLDARVRVKYQQLITNSFVECN QLLRWCPSVDCTYAVKVPYAESRRVHCKCGHVFCFACGENWHDPVKCRWLKKWMKKCD DDSETSNWIAANTKECPKCSVTIEKDGGCNHMVCKNQNCKYEFCWVCLGSWEPHGSSW YNCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEE MQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESAT ETLSEYLERDITSENLADIKQKVQDKYRYCEKRCSVLLKHVHEGYDKDWWEYTE" misc_feature 913..1089 /gene="ari-1" /note="RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins; Region: RING-HC_RBR_HHARI; cd16626" /db_xref="CDD:438288" misc_feature 1114..1359 /gene="ari-1" /note="BRcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: BRcat_RBR_HHARI-like; cd20343" /db_xref="CDD:439004" misc_feature 1369..1542 /gene="ari-1" /note="Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: Rcat_RBR_HHARI-like; cd20356" /db_xref="CDD:439017" misc_feature 1543..>1899 /gene="ari-1" /note="Ariadne domain; Region: Ariadne; pfam19422" /db_xref="CDD:466073" polyA_site 2776 /gene="ari-1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcagcgtgat ttaatcgata attctgcgtt cacttgtcga aaaatgaaag aaatgtttta 61 aaatgttttt aaatcgactt tcgaagttca acgtcaacgc aaccgccgcc aggctgccat 121 gcaactgaac tcgctgccga gtcggccacc ccactggtgt tttaattgtg gcaaaacagc 181 agcacgcagc gtttaaatca gcagccaatt aaacaagcta gtgttaagtg tgcaaaaagc 241 gcaggaagag cgcaacgggc cacgccacaa gcgtcgacag caacaacaac aagagcgacg 301 ggaaaagaaa agggctgcgc aaaaacgtaa acaaaagcaa gtttccaaag ccaaaagcga 361 agaggaaaaa caaagccacg aaagcgaaga acaaagaggg gagctcaaga gaggaagagg 421 aagtggaaga ggaagtggag cggggaggaa cagaggaaga ggcagaggca gagagaagga 481 gcagcagaag aagaagaagc gcaaaacaga gaccgaaaaa tggactcgga caatgacaat 541 gatttctgcg ataatgtcga ctcggggaac gtctcctcgg gcgacgacgg cgacgacgac 601 ttcgggatgg aggtggacct gccgagctcc gcggagcgcc agctggacca ggacgactac 661 cagtacaagg tgctcaccac cgacgagatt gtgcaacacc agcgggagat catcgacgat 721 gtcaatctgc tgctgaagct ccccacgccc ataacgcgga tactgctgaa tcacttcaag 781 tgggacaagg agaagctctt ggagaagtac ttcgacgaca acaacaccga ggagttcttc 841 aaatgcgcac acgtcataaa tcctaacaac gccaccgaag cggtcaggca aacgaccaca 901 cgaagtcagt gcgaggagtg cgaaatatgc ttttccctgc taccgccaga ttccatgacc 961 gggctggagt gcggacaccg attctgcatg atctgttggc gcgagtatct cacaacgaag 1021 atcgttacgg agggtctggg ccagaccatc tcgtgcgcgg cgcacggctg tgatattttg 1081 gtggacgacg tgaccgtcac caggctggtg ctggacgcac gggtgcgggt caagtaccag 1141 cagctgatca ccaatagctt tgtggagtgc aaccagctgc tccgctggtg tccgtccgtc 1201 gactgcacct atgcggtgaa ggtgccgtat gcggagtcgc gtcgcgtcca ctgcaagtgc 1261 ggccatgtct tctgctttgc ctgcggcgag aattggcacg atcctgtcaa gtgtcgctgg 1321 ctaaagaagt ggatgaagaa gtgcgacgac gactcggaga cgtccaactg gattgcggcc 1381 aataccaaag agtgtcccaa gtgcagcgtg accatcgaga aggacggcgg ctgcaatcac 1441 atggtgtgca agaaccagaa ctgcaagtac gagttctgct gggtctgtct cggctcctgg 1501 gagccgcacg gctcctcctg gtacaactgc aatcgctacg acgaggacga ggccaagacg 1561 gcccgggatg cccaggagaa gctgcgctcc tcgctggcca gatatctcca ttactataat 1621 cgctacatga accacatgca gtcgatgaag ttcgagaaca aattgtatgc atctgtgaag 1681 caaaaaatgg aggagatgca gcagcacaac atgtcctgga ttgaggtgca attcctgaaa 1741 aaggctgtcg acatactttg ccagtgccgt cagactctca tgtacacata cgtgtttgcg 1801 tattacttga aaaagaacaa tcaatccatg atattcgagg ataatcaaaa ggacttggag 1861 tcggcaaccg agacgttgtc cgagtatttg gaacgtgata ttacatccga gaatttggct 1921 gatattaagc agaaagtgca agataaatac aggtattgtg aaaagcggtg ctctgtcctg 1981 ctgaagcacg tgcacgaggg gtacgacaag gactggtggg aatacacaga atgacgcgag 2041 tcatggctgg ataactaagc taagctgagc agcggcaggc agtcggagtg tagtgcccgc 2101 caagcgcctc cccatccagc atccgaaatg caccaaacgc aaacgcaaac gctatccccc 2161 catccaaacg cataaccaac caatcaacca accaaccaac cagccacaca cccacccacc 2221 cacacagaaa acgaagccga agaagttgaa cagaagttaa ggataatgca gaagctacac 2281 agagagaaaa ggcaaaagga aagaaaggcg gcactcccac agaaaaggaa aagctgagaa 2341 aacagaaaat gaatccattt caaataattg tgaaaccaga gggaaatcaa tattaaatcg 2401 taatatataa atatataatt atatatatat ttttcttcgt aatgagcagc agcatgagga 2461 cactgagcag gatcagatag acacacagac acaccacaca ccacacacca cactcactca 2521 cacaaccagt cacaaggatc agcagcagaa gcagcagcag cagcatatat atatagtaaa 2581 taatcaacag ttacaaactt atttgatgtt aaccgattgc aaagagatct tcatgttatc 2641 aaaaactaaa caaaaaaaga aagcaaacaa aacaaaaagc gaaaaattag tgaatttcaa 2701 agctccgcga aaaagagaaa cgaacaatag aacctaaact tatgtgaaat aaactacaca 2761 tgtaagcaga aagaaa