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LOCUS XM_070218561 4012 bp mRNA linear INV 09-DEC-2024 SETD1B-A (LOC108060961), transcript variant X3, mRNA. ACCESSION XM_070218561 VERSION XM_070218561.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4012 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4012 /gene="LOC108060961" /note="histone-lysine N-methyltransferase SETD1B-A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060961" CDS 163..3918 /gene="LOC108060961" /codon_start=1 /product="histone-lysine N-methyltransferase SETD1B-A isoform X2" /protein_id="XP_070074662.1" /db_xref="GeneID:108060961" /translation="MSLASTAIDLIHTGLPLLEQSAADLESLPEKQDAEAKQEPKAME EAVLETIAEPPTDLAADVTADSPLEPPSEPLAEPLPEPLPKTLQEPLLKCLIEPLPQP VQEPLPKPLQESLPQPLPEPLVKPVPEPLPENTTEPLQEPLAEKQPQPIPEPLSNPLP KALPEPLPEPPLPEPLPEPLPKPLPEPLPEPQEGRPETPAGNPENQAQAESPPSIMDI SISAQMSPDAPVFYPMGSCLARLLTNGGGGGGDSGQDSPSVPRISPPRSAFEYGTGPY IGPGGDIPRSYQFIDPTATGERNFNSFGLGMDDQEMDEQQQAAQLAETPGVSWVPYYF GSPRTRTTGEDPLSPETGAARSRNNSRSHCECRGEASEVGTSTEFPSFESFAGQLDEI GLARDEFMATLRNLLIRANDLLAPLLQGPFQHMTPIQMAEYTSAILETPPLHPSLFMP ANVPRPWTGLTGLSLPYDIHPHSLTPEDLARIQALPKPVDAATQTEFRCMCMLLSQAG SAPASGDLRPPTTSYFPGQAMNGPRMRVPPQPYANPGTSQNGQAQPQPQQPYGFWGRP MPMAMHPHQVPQHRMPRQAAFQHPPPPQRHPHPQAHPQPHPRPGMQPGHPMAHHKMGG AVRYPEAGNYRGYRLPGPYSPRNQASRYGAIGSDRPAENNGNINGRNHYQNSGYRGNP LYARTALGNNQQQMASVAPNIGHLGNPIGNPVQPMDLGMQLRLNLSAEEANASRQVAS DSSRTESSATENTSYHSERRVSEESSYVEAEDEDGDSEEVDSEGEEDEVEGGEDEDDD DEEEEDENENDEEEDEDEDEEDDEQPRQLSAPDSRSYCFGEVEFMNYVMSETPMLPNP GQQPGAAAYMEHGLPPTPRSNVPCAQVTPHHLPTHFPGYRAAREQPSQVMPPMNQMPP MAQMSQMPQMSQVPPMTSMPGGSYPPTGIPDGQFKEPPPGSQDHYYNNQQYNAMYGQP RPNFDYNASMMGQESAPVAGPSMYMRPPPPPTAAPPPQGPPPSYPMRQERPMAPILFE VGGNRSHSTGSPMMMQNVMSAHGHGRGRGRGPSRGPSRGPHGHHNAYGQMNQMNQNHG MPFNGQMNQMGQMPPHMRNHQVNHQVNHMGQPMGRGMGMGLMPLPVQMLNPNRMAQPN VQQGMPMNRSTMSPRQYANHNPNAMPSYQPQPEMNKMPPMAEGGAAAGSSTPRVNFAA NVANKPRGGTPRNQVGTPRPGAPVPAPVEVATGQQKPIQPSYASMLQ" misc_feature <325..783 /gene="LOC108060961" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <463..624 /gene="LOC108060961" /note="Procyclic acidic repetitive protein (PARP); Region: Trypan_PARP; pfam05887" /db_xref="CDD:368653" ORIGIN 1 agttagattg gagctgcgct agcagcaaca tcaaaaatat tttaagaaaa aaagtacaaa 61 aaaagttttg gaaaaaaaac gaacattttc aataatttat aacgcgttgt tttgagatac 121 ctttaggata aaagtttttg gaaaccggtc agctcctcca gcatgtccct cgcatccacg 181 gccatcgacc tcatccacac cggtctgccg cttctcgaac agagcgcagc cgacctggag 241 tcgctgccgg agaagcagga tgcggaggcc aagcaggaac cgaaagcaat ggaagaagct 301 gttttggaaa cgatagcaga accaccaaca gatttagctg cggatgtaac agctgattcc 361 ccattggaac caccatcgga accccttgcg gaaccactac ctgaacccct accgaaaact 421 ctacaggaac ccctgctgaa atgcttaata gaacccctac cacaaccggt acaggaaccc 481 ctaccgaaac ctcttcagga atcactacca caacctctac cggaaccact agtgaaacct 541 gtaccggaac ctctgccgga aaatacaaca gaacctctgc aggaacctct agcggaaaaa 601 caaccacagc ccataccaga acccctatca aatcctttac caaaagcact accggaaccc 661 ctaccggaac cacccctacc ggaaccccta ccagaacctc taccaaaacc actaccagaa 721 ccactaccag aacctcaaga aggtcgacca gagacgcccg ctggcaatcc ggagaaccag 781 gcccaagccg agtcgcctcc gagcatcatg gacatctcga tcagcgctca gatgtccccg 841 gacgcccccg tcttctatcc catgggctcc tgtctcgccc gcctgctgac caacggagga 901 ggaggaggag gagactcggg acaggacagt ccaagcgttc cgcggatctc gccgccacgg 961 agcgccttcg aatacggaac tggtccgtat atcggcccag gaggcgacat cccgcgcagc 1021 tatcagttca tcgatccaac ggccaccggc gagcggaact tcaacagttt cggactgggc 1081 atggatgacc aggagatgga cgaacagcag caggcggcgc agctggcgga aacaccaggc 1141 gtatcgtggg tgccctacta tttcggcagt ccgcgaacga ggacaacggg cgaggatcct 1201 ttgtcgccgg aaacgggagc agcgaggagc aggaacaaca gcaggagcca ctgcgaatgc 1261 agaggcgagg catccgaggt cgggacatcc accgagttcc catccttcga gtcctttgcc 1321 gggcaactgg acgaaatcgg tttggcccgc gacgagttca tggcaacgct gcgcaatctg 1381 ctcatccggg cgaatgacct gttggcgccg ctactccagg gtcccttcca gcacatgacg 1441 cccatccaga tggccgagta taccagcgcc attctggaga cgcctcccct gcatccgagt 1501 ctcttcatgc cggcgaatgt gccacgtccc tggacggggc tcactggtct cagcctgccc 1561 tacgacatcc atccgcacag cctgacgccc gaggacttgg cccgcatcca ggcgctgccc 1621 aagcccgtgg atgccgccac ccagacggag ttccgctgca tgtgcatgct actctcgcag 1681 gcaggatctg cgccagcatc cggcgacctg cgacctccaa cgacctctta cttcccagga 1741 caagcgatga atggaccacg aatgcgggtt cctccgcagc catatgcaaa cccgggaact 1801 tcacagaacg gacaggcaca gccgcaacct cagcagccct acggtttctg gggcagaccc 1861 atgccgatgg cgatgcatcc gcaccaagtt ccgcagcatc gcatgccccg acaggccgcc 1921 ttccagcatc caccgccgcc gcaacggcat ccacatccgc aagcgcatcc gcagccgcat 1981 ccgcgcccgg gaatgcagcc cggtcatccg atggcgcacc acaagatggg cggagcagtg 2041 cgctacccgg aggctggtaa ctatcgtggc tatcggctgc ctggtcccta cagtccgcgg 2101 aatcaggcga gtcgctacgg cgccatcggc agtgatcgtc ccgccgagaa taatggtaat 2161 attaatggaa ggaatcatta ccagaactcc ggctaccgtg gtaatccact ctatgcgaga 2221 acagctctcg gcaacaatca acagcagatg gcttcggttg ctccgaatat cggtcatctc 2281 ggtaatccca tcggcaatcc tgtccagccc atggatctgg gcatgcagct gagattgaat 2341 ctgagtgcgg aggaggcgaa tgccagcaga caggtggcct ccgactcgtc gcgcaccgag 2401 tcctcggcca ccgagaacac cagctatcac tcggagcgcc gggtgagcga ggagagcagc 2461 tacgtggagg cggaggacga ggatggggac agcgaagagg tggactccga gggggaggag 2521 gacgaggtcg agggcggcga ggacgaggat gacgatgatg aggaggaaga ggatgagaat 2581 gagaatgacg aagaagagga tgaggatgag gatgaggagg atgatgagca gccccgtcag 2641 ctgtctgctc ccgattcccg ttcctactgc ttcggtgagg tggagttcat gaactacgtc 2701 atgtccgaga cgcccatgct gcccaatccc ggccagcagc caggagccgc cgcctatatg 2761 gagcacggcc tgccgccaac tccacgctcg aatgtgccct gtgcccaggt gacgccccac 2821 cacctgccca cccactttcc aggctatcgt gctgctcggg agcagccttc ccaggtcatg 2881 cctccaatga accagatgcc tcccatggct caaatgtctc aaatgcctca aatgtcccaa 2941 gtgcctccta tgacctccat gccaggaggc agttacccac ctaccggcat accagatggc 3001 cagttcaagg agccaccgcc aggatcacag gatcattact acaacaacca gcaatacaat 3061 gccatgtacg gccaaccgcg acccaatttc gactacaatg cgagcatgat gggtcaggaa 3121 tcagctccgg tggcaggacc cagcatgtac atgagaccac cacctccccc cacagcagca 3181 ccaccaccac aaggacctcc accttcgtat cccatgcgac aggagcgccc aatggccccc 3241 attctcttcg aggtgggcgg caatcgcagt catagcactg gttcgcccat gatgatgcag 3301 aacgtgatga gtgcccacgg acatggacgc ggtcgtggtc gtggtcccag tcgtggtcct 3361 agtcgaggtc cccatggcca ccacaatgcc tatggccaga tgaatcagat gaatcagaat 3421 catggaatgc ccttcaatgg gcagatgaac caaatgggac agatgccgcc gcacatgcgg 3481 aaccatcaag tgaaccacca ggtcaaccac atgggccaac caatgggcag gggaatgggc 3541 atgggcctga tgcccctgcc cgtccagatg ctcaatccga atcgcatggc ccagccgaat 3601 gtgcagcagg gaatgcccat gaatcgctcg accatgagtc ctcgccagta tgccaatcac 3661 aatcccaatg cgatgcccag ctatcagcct cagccggaga tgaacaagat gccaccgatg 3721 gcggagggag gagctgcagc tggatcctcc acacctcgtg tgaatttcgc ggccaatgtg 3781 gcgaacaagc cacgtggtgg aactccacgt aaccaggtgg gcactccgag accgggagct 3841 cctgttcctg cgccggtgga agtggctact ggacagcaga aacccatcca accttcctat 3901 gcctccatgc tgcagtaaaa gtgggatttt aatagttcct tccatatgtc cttttttttc 3961 tcttattttt ttttggtcaa ataaatcgcg cacaatcatt ccatattcat at