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LOCUS XM_070218533 7073 bp mRNA linear INV 09-DEC-2024 (RhoGAPp190), transcript variant X4, mRNA. ACCESSION XM_070218533 VERSION XM_070218533.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7073 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7073 /gene="RhoGAPp190" /note="Rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056706" CDS 11..4729 /gene="RhoGAPp190" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X4" /protein_id="XP_070074634.1" /db_xref="GeneID:108056706" /translation="MRQFNISVIGLSGTEKDRGQVGVGKSCLCNRFMRPMADDYFIDH ISVLSQSDFSGRIVNNDHFLYWGDVRKTTEEGVEYQFNIIEQTEFMDDSTFQAFKVGK MDPYSKRCTATKVFSAEKLMYICKNQLGIEKEYEQKVMPDGRLSIDGFVVVFDVSPVP NRSVEKQVEFVQNVIATILKNKKPLVLVTTKNDDAYELYVREAEKISQRKDYKSTVQL IETSAHESINIDLAFLLLAQMIDKVKNRVKIISYQESAKSRKELLDTRSEAVTRLIRN QITDYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLHQYL DKFALALEYLLPDIGALNISDDDAWECARNYLQNHIEFEQYFFECPQASWTELVDMDE AEDEARIPFDVLETSEAETVFRNYLNSVQQDKKKIGWKQQFKMLLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDDIIEKSKQNFVELLLEHAQYFLQFKNVDN ITQEDVRQITDVIQEDSRYKMLDRLDQERRLMLVQHLRFIHCPIRDHCPFFYNCVDSL IEEVLSDKSASNHKTPSNVGGWKTSGSGSDRTLNLLIVGSEHLASDLLNDIRICTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNQQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGMRLSEMLHCDFIDHTQNHQKYVYDI LNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVAESTLVKANE HSIIIDVFIGDAKRRVEFILSSYHGTSQYRDELIHGYIYFYSAKRRSSLANLSILAAQ NANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFY NPFLKTAWDNKYEVENLHVEESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTD GSGSENYEMAPTRSLNSLNEERDISLDEIYDDNEKPKHLHQKWLEDKSDGRRNMNKNS IWNNFSGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKVGEAPSRNCPAMSSSTFTLPTQ QPGKLNMKNFQLVSDAVAKMNFTGSGSGSGSGSGSGSTGLGLGLGTGGSGSMADSYLE PCDKDGKRYDHAQLDGEDEDSEELAEYEQIYENEDCTESDSCASSTERRVRQQNAYYK ANSKKPVAAKKQKKKKVAIPVQTPRVPPFGSYVSPPEIPLHYQRMVVGGGGGGGGGPG EKKKPEPCVPDFMKSDKSPEYSMVPELAAAGIFGAENIPEYSAKCLKEYEKLEKLEKR RIKEETARLRKLQEKEKEQEKKLKRKLKQNSKGLVESAEAQFGKLMISSEQGEIPIFL NKCVEFIEKEGLDSEGIYRVPGSRAHVDMLFQRFEDDTNTEIDALDIPVNAVATALKD FFSKRLPPLFSKDIIKELEEIAGSRGVGNSKLNVEVKTDRSCRLIALKSLLQKLPPIN FAILKYIFQHFVHVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDIV QTMIDQFPYLFCGKDAFVMV" misc_feature <452..724 /gene="RhoGAPp190" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 578..589 /gene="RhoGAPp190" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 674..682 /gene="RhoGAPp190" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 770..1009 /gene="RhoGAPp190" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1805..2257 /gene="RhoGAPp190" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cd22207" /db_xref="CDD:412064" misc_feature 4094..4696 /gene="RhoGAPp190" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an...; Region: RhoGAP_p190; cd04373" /db_xref="CDD:239838" misc_feature order(4199..4201,4313..4315,4325..4327,4571..4573, 4580..4585,4667..4669) /gene="RhoGAPp190" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239838" misc_feature 4199..4201 /gene="RhoGAPp190" /note="catalytic residue [active]" /db_xref="CDD:239838" polyA_site 7073 /gene="RhoGAPp190" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtacgtcaag atgcgtcagt ttaacatctc ggtcattgga ctatccggga ccgaaaagga 61 ccgcggccag gtgggcgtgg gcaagtcatg cctgtgcaac agattcatgc gcccaatggc 121 cgacgactac ttcatcgatc acatatcagt gctcagccag agcgacttca gtggccggat 181 cgtgaacaac gaccactttc tctactgggg cgatgttcgc aagacgacgg aggagggcgt 241 cgagtatcag ttcaatatca tcgagcagac cgaattcatg gacgactcca ccttccaggc 301 ctttaaggtg ggcaagatgg atccgtactc caagcgttgc acagccacca aggtcttttc 361 ggcggagaaa ctaatgtata tatgcaagaa tcagttgggc atcgagaagg agtacgaaca 421 gaaggtgatg cccgatggcc ggctgagtat cgatggcttt gtcgtcgtct tcgatgtgag 481 tcccgtgccc aatcgcagtg tggagaagca ggtggaattt gtgcagaacg tcatagccac 541 catattgaag aacaagaagc cgctggtgct ggtgaccacg aagaacgacg acgcctacga 601 gctgtacgta cgcgaggcgg agaagattag ccagcgcaag gactacaaga gcaccgttca 661 gctgatcgag acatcggccc acgagagcat caacatcgat ttggccttcc tcctgctcgc 721 ccagatgatc gacaaggtta agaaccgggt caagatcatc tcgtaccagg agtcggccaa 781 gtcgcgcaag gagctactgg acacgcgttc cgaggcggtt acgcgactca ttcgcaacca 841 gatcaccgac tatcatgtgc tgtggtcgca gggctccaag atgctgtcgc agtatcgcga 901 atggaacgag ttcctcaaca tctttggcca cgaggcaggc cagaagctct ttcggcggca 961 tatgaagaag ctgcgcgacg atcatctcaa caagaagctg catcagtatt tggacaagtt 1021 cgctttggcc ctggaatacc tgctgccgga tatcggggct ttgaatatca gcgacgatga 1081 tgcgtgggag tgcgccagga attatctgca gaatcacatc gaattcgagc agtacttctt 1141 cgagtgcccg caggcctcgt ggacggagct ggtggacatg gacgaggcgg aggacgaggc 1201 acgcattccg ttcgatgtgc tcgagacctc cgaggcggag acagtcttcc gtaattactt 1261 gaattcggtg cagcaggaca agaagaagat tggatggaag cagcaattca agatgctgct 1321 cgaggagtcc ggctttgtga cgcccggcaa gcaattgtcc gaggtgcgag tccttttcat 1381 gggccgcgaa tgcttcgagg ctctgtcgga gcacgactgc cagcagatct acgacatcca 1441 ccaggacgac atcatcgaga agagcaagca gaactttgtg gagctactgc tggagcatgc 1501 ccagtacttt ctgcagttca agaacgtgga caatatcacg caggaggatg tccgccagat 1561 cacggatgtc atacaggagg attcgcgcta caagatgttg gatcgtttgg accaggagcg 1621 gcggctgatg ctcgtccagc atttgcgctt catccactgc cccatccggg atcactgccc 1681 ctttttctac aactgtgtcg atagcctgat cgaggaggtg ctgtccgaca agtcggccag 1741 caatcacaag acgcccagca acgtcggcgg ttggaagaca tcgggcagcg gcagcgatcg 1801 cacgctcaat ctgctgatcg ttggctccga gcatctggcc agcgatctgc tcaacgacat 1861 acgcatctgc accgggagca agggcgagta catctacgag aaccagacgt attatctcaa 1921 ctaccgaatc gccaacggcg acatggaggc cttcaaggcc atcgatgtct attcgagtgg 1981 tctcatttgc gtgtactcca accagcaatc ctttgagacg ctcaaggata acttggagcg 2041 cacgctgctc tgcaacttgg agctggagga taagttcgag aacctgccca tcgtgctcgt 2101 ctaccagccg caggatctca aggagaacga ggtggagtac ttgcgcaacg agggcatgcg 2161 actgtcggag atgctgcact gcgacttcat cgatcatacg cagaatcacc agaaatatgt 2221 ctacgacata ctcaacattg tcatcctgtc actgaagctg accgagatga agagctacga 2281 gccatatccc tccaatcaca ccgatctgcg gatcctgtgc tgcatcttct gtggcgatca 2341 gtacgatatc gagaacattg tgcagccgct ggtcgccgaa tcgacgctgg tcaaggccaa 2401 cgagcactcg atcataatcg atgtcttcat cggcgacgcc aagcggcggg tcgagtttat 2461 cctgtcttca tatcacggca ctagccagta ccgcgatgag ctaatccatg gctacattta 2521 cttttactcc gccaagcgtc gatcttcgtt ggcgaatcta agcatcctgg cagcccagaa 2581 tgccaacatt ccattgcaga ttatcgcggt gaccgagagc gggggcgtaa atgccttttt 2641 caacagcgat atttgccagt ttttgatcac cgagggcaat gcggtggccg atcgcttcaa 2701 gggcagcttt atgaccttct cggcggatca gtatgtcaag tttgcgttct ataatccatt 2761 cctgaagacc gcctgggaca acaagtacga ggtggagaac ctgcatgtgg aggagtcaat 2821 tactttggat tcgggcgagg gcacgctgga gaactcggtt aaccagatgc cacgcccgcc 2881 gccgcgccac gagagctaca tgctgtccaa tacgctggga accgatggtt ccggcagtga 2941 gaactacgaa atggctccta cccgatctct caactcatta aatgaagaaa gagatatatc 3001 attagatgaa atctacgatg acaacgaaaa gcccaagcac ctgcatcaaa agtggctgga 3061 ggataaaagc gacgggcggc gcaacatgaa caagaactcg atttggaaca actttagcgg 3121 atcgacacat gcctacacca ccggccggcg gcacattgac tccaatctga acaagatccg 3181 cccgaaggga cccagccaaa cgctgaaggt gggcgaggcg cccagtcgca attgcccggc 3241 gatgagctcc tccaccttca ccctgcccac ccagcagccg ggcaagctga atatgaagaa 3301 tttccagctg gtcagcgatg cggtggccaa gatgaatttc accggatccg gttcgggatc 3361 gggatcaggc tcgggatccg gtagcaccgg tttgggcttg ggcctgggca ccggcggcag 3421 tggcagcatg gcggactcgt atctggagcc ctgcgacaag gatggcaagc gatacgatca 3481 cgcccagttg gatggcgagg atgaggattc cgaggagctg gccgagtacg agcagatcta 3541 cgaaaacgaa gactgcaccg aatccgacag ctgtgccagt tccacggagc gacgggtgcg 3601 ccagcagaac gcctactaca aggccaacag caagaagccg gtggccgcca agaagcagaa 3661 gaagaagaag gtggccattc cggtgcagac gccgcgtgtt cctccgttcg gctcatatgt 3721 gagtccgccg gaaattccgc tgcactacca gcgaatggtc gttggcggcg ggggcggagg 3781 cggcggcggg ccaggtgaga aaaagaaacc cgaaccttgc gttcccgatt tcatgaagag 3841 cgacaaatcg cctgagtatt ccatggtgcc agagctggcg gctgctggga tcttcggtgc 3901 ggagaatata cccgaatata gcgccaagtg cttgaaggaa tacgagaagt tggagaagct 3961 agagaagcgg cgcatcaagg aggagacggc caggttgcgc aagctccagg agaaggagaa 4021 ggagcaggag aagaagctca agcgcaagct gaagcaaaac tccaagggtc tcgttgaatc 4081 ggcggaggcg cagtttggca agctgatgat tagctccgag cagggtgaga tccccatttt 4141 cctcaacaag tgcgtggaat ttatcgagaa ggagggcctg gattccgagg gcatttatcg 4201 agtgcccggc agcagggcgc atgtcgacat gctattccaa cgattcgaag atgataccaa 4261 caccgagatt gatgcgctgg acattcccgt taacgcagtg gccacggcac tcaaggactt 4321 tttctccaag cgcctgccgc cgctgttcag caaggatatc atcaaggagc tggaggagat 4381 tgccggttcc cgtggcgtgg gcaattccaa actgaatgtg gaggtcaaaa cggaccggag 4441 ttgccgcttg atagctttaa aatcgctgct ccaaaagctg ccgcccatca actttgccat 4501 actcaaatac atattccagc actttgtgca cgtctcggac aactcgaagc taaatagcat 4561 ggacagcaag aacctggcca tctgctggtg gcccacactc attcccatcg acttcaccga 4621 catgggccac ttcgagcagc tgcgtccgta tctggaggac attgtccaga caatgatcga 4681 ccagttcccg tatctgttct gcggcaagga tgcttttgtc atggtctagg cctagatccc 4741 cgccagatca tggcgcactt ggactttcac ttgaccgccg gacgcgaagc caaaacgaga 4801 tagttagatt caatgtgcga gtgtatgaat gtgggcgcca tccagtgcca tgtgtgcttt 4861 gtgttttctg ggtgatcaag atgtaaggag taatagccat aggaaggaaa gaaggaggga 4921 agaaaggaag gaaaggaagg ttagcaggag gcagcccatc gatcgatcga ttcattcaaa 4981 tgaggatcag cagccaggca tatacatatt tataatagta tataatatat acttgggtct 5041 attgtgtgcg atttgtgtga ttgtgcgtgc gtgcgtgtgc gtatgtgaga acagaacttg 5101 gctaagtagg gtatatttat tttttatata tacaatatat attttgtatc gatggctttg 5161 ttgtgtttcc gtgatatatg taaacgcgtc aagtattctc tctctgtgtg tggtgcgtcc 5221 tttagtcgtt gaatccattg agtgagacct cccctcgccg ccccccagac cccaccccca 5281 aaaaagtctt ctaactccaa gctccatcta aactcctccc atcaacaaaa cgaacaaagg 5341 ggcggggcgg gggcgccaac gacaacgcac aaaaaatata aaaaacaaaa aatataaaaa 5401 ccaagatata gatgaaggca tggggagata tctaaaatct agtacgaaga tggttaaata 5461 aaatttactg tgtatctgtg tatgttataa atgtaattgt aattgtatgt taaaaataat 5521 gcgcgatcag caaacaaatt tccatataaa cacaatagcg ataatgctag atatataata 5581 tatatttaaa taccactaaa tgtctgtgtg tctagaatag gagaaagtat gtagtagagg 5641 acgaagagga ggaggaggag gcttttggga gaaaggacaa ccgaaaaaac aaaaacaaaa 5701 caacccataa gaacaaccga gcaaaatcta attttcgagc taaactaaat gtgcatctca 5761 gtgtgtgtgt ctgtatatgt atgtttgtca tccaactaga tatacactat ataattatat 5821 agctaccata taagcaaaaa atgataatta ctacgaaacg gcaaaggaaa tctcccataa 5881 aaaatatgaa aaaaaaaacc aagaaaaacg aagaaaataa aactcaaatt tccccccaca 5941 ctcgaatctc cactgattgt ctaattgata tttgcattag ccaggcatat aatccttaat 6001 gtaatactct ctctatctgt ctctctgaaa aacgaaaacg ataacgaaaa aaaccaaaat 6061 gtgtgtgtgt actgtatcaa attagcgaaa caacaaatta tacaatttct acccatgtac 6121 gcatatattt taactaaaca aaaaagaaag cgaggatcag atcagatatt cagaaataaa 6181 caaaaggtaa ggcagcagaa aataataata tttgacaaca ggcagaggca aataagtaaa 6241 aaattgtaga caacatacgc ctaagtgtta ttccttgtaa ttgagcatta attttttata 6301 taaaaccgaa acttaattat gtaattgtgt gtatcttgtg tctgaaacgg acctcaaact 6361 taaaggaagt aaaaaataac gcgatttctg ttgccaacaa aaaacagaag gcagaaaaat 6421 aagcactcaa agtaaaatta aaacaaaaaa aaaaagataa aaaccaataa cgagagaaaa 6481 agaaaagaaa aacttaacca ttatatagta taatttgtat agatgtgtgt ctattgcatt 6541 atttgtacac gtacatatat ataccgtcta tatattaccg tatatatgtg tatgcattta 6601 tttatatacg ctaaactgaa aagaaaaaaa gaaaaaccaa gcaaatatgt ctaaacgaaa 6661 cgaacaaaaa aatgcaaaac aaaacgaaca aaaaaattgt aattgacgtg atgtgtaatg 6721 atatttttaa aagcaaattt tatgccacgc ccatgccaag cagccacgcc ccctttttaa 6781 caaaaagggc gatttccccc ccctcttccc gcgcggaacg cagccacttt ccccccgtcc 6841 cgctcgccca gtaattccaa atctcactcc cacgctctcc agatcacgga tcccatggat 6901 ccatacataa atcctccagg tcagagatgg tcagttgctc ctggactcca tccaatgggc 6961 tggtagcgat gtggaggcgc ctcaaccaag agacgagaga gaaaataata cgaaatcaaa 7021 tcaaagaaaa acaaaaataa atttgtgggc attttccaaa tatttgtgaa gca