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LOCUS XM_070218531 7252 bp mRNA linear INV 09-DEC-2024 (RhoGAPp190), transcript variant X2, mRNA. ACCESSION XM_070218531 VERSION XM_070218531.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7252 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7252 /gene="RhoGAPp190" /note="Rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056706" CDS 28..4908 /gene="RhoGAPp190" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X2" /protein_id="XP_070074632.1" /db_xref="GeneID:108056706" /translation="MRQFNISVIGLSGTEKDRGQVGVGKSCLCNRFMRPMADDYFIDH ISVLSQSDFSGRIVNNDHFLYWGDVRKTTEEGVEYQFNIIEQTEFMDDSTFQAFKVGK MDPYSKRCTATKVFSAEKLMYICKNQLGIEKEYEQKVMPDGRLSIDGFVVVFDVSPVP NRSVEKQVEFVQNVIATILKNKKPLVLVTTKNDDAYELYVREAEKISQRKDYKSTVQL IETSAHESINIDLAFLLLAQMIDKVKNRVKIISYQESAKSRKELLDTRSEAVTRLIRN QITDYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLHQYL DKFALALEYLLPDIGALNISDDDAWECARNYLQNHIEFEQYFFECPQASWTELVDMDE AEDEARIPFDVLETSEAETVFRNYLNSVQQDKKKIGWKQQFKMLLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDDIIEKSKQNFVELLLEHAQYFLQFKNVDN ITQEDVRQITDVIQEDSRYKMLDRLDQERRLMLVQHLRFIHCPIRDHCPFFYNCVDSL IEEVLSDKSASNHKTPSNVGGWKTSGSGSDRTLNLLIVGSEHLASDLLNDIRICTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNQQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGMRLSEMLHCDFIDHTQNHQKYVYDI LNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVAESTLVKANE HSIIIDVFIGDAKRRVEFILSSYHGTSQYRDELIHGYIYFYSAKRRSSLANLSILAAQ NANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFY NPFLKTAWDNKYEVENLHVEESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTD GSGSENYEMAPTRSLNSLNEERDISLDEIYDDNEKPKHLHQRFQIFPPPTTPPEPAPP DHQLITCTYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLEDKSDGRRNMNKNSI WNNFSGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKVGEAPSRNCPAMSSSTFTLPTQQ PGKLNMKNFQLVSDAVAKMNFTGSGSGSGSGSGSGSTGLGLGLGTGGSGSMADSYLEP CDKDGKRYDHAQLDGEDEDSEELAEYEQIYENEDCTESDSCASSTERRVRQQNAYYKA NSKKPVAAKKQKKKKVAIPVQTPRVPPFGSYVSPPEIPLHYQRMVVGGGGGGGGGPEK PEPCVPDFMKSDKSPEYSMVPELAAAGIFGAENIPEYSAKCLKEYEKLEKLEKRRIKE ETARLRKLQEKEKEQEKKLKRKLKQNSKGLVESAEAQFGKLMISSEQGEIPIFLNKCV EFIEKEGLDSEGIYRVPGSRAHVDMLFQRFEDDTNTEIDALDIPVNAVATALKDFFSK RLPPLFSKDIIKELEEIAGSRGVGNSKLNVEVKTDRSCRLIALKSLLQKLPPINFAIL KYIFQHFVHVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDIVQTMI DQFPYLFCGKDAFVMV" misc_feature <469..741 /gene="RhoGAPp190" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 595..606 /gene="RhoGAPp190" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 691..699 /gene="RhoGAPp190" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 787..1026 /gene="RhoGAPp190" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1822..2274 /gene="RhoGAPp190" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cd22207" /db_xref="CDD:412064" misc_feature 4273..4875 /gene="RhoGAPp190" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an...; Region: RhoGAP_p190; cd04373" /db_xref="CDD:239838" misc_feature order(4378..4380,4492..4494,4504..4506,4750..4752, 4759..4764,4846..4848) /gene="RhoGAPp190" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239838" misc_feature 4378..4380 /gene="RhoGAPp190" /note="catalytic residue [active]" /db_xref="CDD:239838" polyA_site 7252 /gene="RhoGAPp190" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaaatacga aaaccaggta cgtcaagatg cgtcagttta acatctcggt cattggacta 61 tccgggaccg aaaaggaccg cggccaggtg ggcgtgggca agtcatgcct gtgcaacaga 121 ttcatgcgcc caatggccga cgactacttc atcgatcaca tatcagtgct cagccagagc 181 gacttcagtg gccggatcgt gaacaacgac cactttctct actggggcga tgttcgcaag 241 acgacggagg agggcgtcga gtatcagttc aatatcatcg agcagaccga attcatggac 301 gactccacct tccaggcctt taaggtgggc aagatggatc cgtactccaa gcgttgcaca 361 gccaccaagg tcttttcggc ggagaaacta atgtatatat gcaagaatca gttgggcatc 421 gagaaggagt acgaacagaa ggtgatgccc gatggccggc tgagtatcga tggctttgtc 481 gtcgtcttcg atgtgagtcc cgtgcccaat cgcagtgtgg agaagcaggt ggaatttgtg 541 cagaacgtca tagccaccat attgaagaac aagaagccgc tggtgctggt gaccacgaag 601 aacgacgacg cctacgagct gtacgtacgc gaggcggaga agattagcca gcgcaaggac 661 tacaagagca ccgttcagct gatcgagaca tcggcccacg agagcatcaa catcgatttg 721 gccttcctcc tgctcgccca gatgatcgac aaggttaaga accgggtcaa gatcatctcg 781 taccaggagt cggccaagtc gcgcaaggag ctactggaca cgcgttccga ggcggttacg 841 cgactcattc gcaaccagat caccgactat catgtgctgt ggtcgcaggg ctccaagatg 901 ctgtcgcagt atcgcgaatg gaacgagttc ctcaacatct ttggccacga ggcaggccag 961 aagctctttc ggcggcatat gaagaagctg cgcgacgatc atctcaacaa gaagctgcat 1021 cagtatttgg acaagttcgc tttggccctg gaatacctgc tgccggatat cggggctttg 1081 aatatcagcg acgatgatgc gtgggagtgc gccaggaatt atctgcagaa tcacatcgaa 1141 ttcgagcagt acttcttcga gtgcccgcag gcctcgtgga cggagctggt ggacatggac 1201 gaggcggagg acgaggcacg cattccgttc gatgtgctcg agacctccga ggcggagaca 1261 gtcttccgta attacttgaa ttcggtgcag caggacaaga agaagattgg atggaagcag 1321 caattcaaga tgctgctcga ggagtccggc tttgtgacgc ccggcaagca attgtccgag 1381 gtgcgagtcc ttttcatggg ccgcgaatgc ttcgaggctc tgtcggagca cgactgccag 1441 cagatctacg acatccacca ggacgacatc atcgagaaga gcaagcagaa ctttgtggag 1501 ctactgctgg agcatgccca gtactttctg cagttcaaga acgtggacaa tatcacgcag 1561 gaggatgtcc gccagatcac ggatgtcata caggaggatt cgcgctacaa gatgttggat 1621 cgtttggacc aggagcggcg gctgatgctc gtccagcatt tgcgcttcat ccactgcccc 1681 atccgggatc actgcccctt tttctacaac tgtgtcgata gcctgatcga ggaggtgctg 1741 tccgacaagt cggccagcaa tcacaagacg cccagcaacg tcggcggttg gaagacatcg 1801 ggcagcggca gcgatcgcac gctcaatctg ctgatcgttg gctccgagca tctggccagc 1861 gatctgctca acgacatacg catctgcacc gggagcaagg gcgagtacat ctacgagaac 1921 cagacgtatt atctcaacta ccgaatcgcc aacggcgaca tggaggcctt caaggccatc 1981 gatgtctatt cgagtggtct catttgcgtg tactccaacc agcaatcctt tgagacgctc 2041 aaggataact tggagcgcac gctgctctgc aacttggagc tggaggataa gttcgagaac 2101 ctgcccatcg tgctcgtcta ccagccgcag gatctcaagg agaacgaggt ggagtacttg 2161 cgcaacgagg gcatgcgact gtcggagatg ctgcactgcg acttcatcga tcatacgcag 2221 aatcaccaga aatatgtcta cgacatactc aacattgtca tcctgtcact gaagctgacc 2281 gagatgaaga gctacgagcc atatccctcc aatcacaccg atctgcggat cctgtgctgc 2341 atcttctgtg gcgatcagta cgatatcgag aacattgtgc agccgctggt cgccgaatcg 2401 acgctggtca aggccaacga gcactcgatc ataatcgatg tcttcatcgg cgacgccaag 2461 cggcgggtcg agtttatcct gtcttcatat cacggcacta gccagtaccg cgatgagcta 2521 atccatggct acatttactt ttactccgcc aagcgtcgat cttcgttggc gaatctaagc 2581 atcctggcag cccagaatgc caacattcca ttgcagatta tcgcggtgac cgagagcggg 2641 ggcgtaaatg cctttttcaa cagcgatatt tgccagtttt tgatcaccga gggcaatgcg 2701 gtggccgatc gcttcaaggg cagctttatg accttctcgg cggatcagta tgtcaagttt 2761 gcgttctata atccattcct gaagaccgcc tgggacaaca agtacgaggt ggagaacctg 2821 catgtggagg agtcaattac tttggattcg ggcgagggca cgctggagaa ctcggttaac 2881 cagatgccac gcccgccgcc gcgccacgag agctacatgc tgtccaatac gctgggaacc 2941 gatggttccg gcagtgagaa ctacgaaatg gctcctaccc gatctctcaa ctcattaaat 3001 gaagaaagag atatatcatt agatgaaatc tacgatgaca acgaaaagcc caagcacctg 3061 catcaaagat tccagatatt ccctcctcca acaactcctc cagagccagc ccctccagat 3121 catcagctca ttacatgcac atataagagt caattcgttt cggcttcaga atcaagtttg 3181 gaagaaataa catccgatgt cagcgggtcc aaggattcac tggccaccca tgatgcagag 3241 tggctggagg ataaaagcga cgggcggcgc aacatgaaca agaactcgat ttggaacaac 3301 tttagcggat cgacacatgc ctacaccacc ggccggcggc acattgactc caatctgaac 3361 aagatccgcc cgaagggacc cagccaaacg ctgaaggtgg gcgaggcgcc cagtcgcaat 3421 tgcccggcga tgagctcctc caccttcacc ctgcccaccc agcagccggg caagctgaat 3481 atgaagaatt tccagctggt cagcgatgcg gtggccaaga tgaatttcac cggatccggt 3541 tcgggatcgg gatcaggctc gggatccggt agcaccggtt tgggcttggg cctgggcacc 3601 ggcggcagtg gcagcatggc ggactcgtat ctggagccct gcgacaagga tggcaagcga 3661 tacgatcacg cccagttgga tggcgaggat gaggattccg aggagctggc cgagtacgag 3721 cagatctacg aaaacgaaga ctgcaccgaa tccgacagct gtgccagttc cacggagcga 3781 cgggtgcgcc agcagaacgc ctactacaag gccaacagca agaagccggt ggccgccaag 3841 aagcagaaga agaagaaggt ggccattccg gtgcagacgc cgcgtgttcc tccgttcggc 3901 tcatatgtga gtccgccgga aattccgctg cactaccagc gaatggtcgt tggcggcggg 3961 ggcggaggcg gcggcgggcc agagaaaccc gaaccttgcg ttcccgattt catgaagagc 4021 gacaaatcgc ctgagtattc catggtgcca gagctggcgg ctgctgggat cttcggtgcg 4081 gagaatatac ccgaatatag cgccaagtgc ttgaaggaat acgagaagtt ggagaagcta 4141 gagaagcggc gcatcaagga ggagacggcc aggttgcgca agctccagga gaaggagaag 4201 gagcaggaga agaagctcaa gcgcaagctg aagcaaaact ccaagggtct cgttgaatcg 4261 gcggaggcgc agtttggcaa gctgatgatt agctccgagc agggtgagat ccccattttc 4321 ctcaacaagt gcgtggaatt tatcgagaag gagggcctgg attccgaggg catttatcga 4381 gtgcccggca gcagggcgca tgtcgacatg ctattccaac gattcgaaga tgataccaac 4441 accgagattg atgcgctgga cattcccgtt aacgcagtgg ccacggcact caaggacttt 4501 ttctccaagc gcctgccgcc gctgttcagc aaggatatca tcaaggagct ggaggagatt 4561 gccggttccc gtggcgtggg caattccaaa ctgaatgtgg aggtcaaaac ggaccggagt 4621 tgccgcttga tagctttaaa atcgctgctc caaaagctgc cgcccatcaa ctttgccata 4681 ctcaaataca tattccagca ctttgtgcac gtctcggaca actcgaagct aaatagcatg 4741 gacagcaaga acctggccat ctgctggtgg cccacactca ttcccatcga cttcaccgac 4801 atgggccact tcgagcagct gcgtccgtat ctggaggaca ttgtccagac aatgatcgac 4861 cagttcccgt atctgttctg cggcaaggat gcttttgtca tggtctaggc ctagatcccc 4921 gccagatcat ggcgcacttg gactttcact tgaccgccgg acgcgaagcc aaaacgagat 4981 agttagattc aatgtgcgag tgtatgaatg tgggcgccat ccagtgccat gtgtgctttg 5041 tgttttctgg gtgatcaaga tgtaaggagt aatagccata ggaaggaaag aaggagggaa 5101 gaaaggaagg aaaggaaggt tagcaggagg cagcccatcg atcgatcgat tcattcaaat 5161 gaggatcagc agccaggcat atacatattt ataatagtat ataatatata cttgggtcta 5221 ttgtgtgcga tttgtgtgat tgtgcgtgcg tgcgtgtgcg tatgtgagaa cagaacttgg 5281 ctaagtaggg tatatttatt ttttatatat acaatatata ttttgtatcg atggctttgt 5341 tgtgtttccg tgatatatgt aaacgcgtca agtattctct ctctgtgtgt ggtgcgtcct 5401 ttagtcgttg aatccattga gtgagacctc ccctcgccgc cccccagacc ccacccccaa 5461 aaaagtcttc taactccaag ctccatctaa actcctccca tcaacaaaac gaacaaaggg 5521 gcggggcggg ggcgccaacg acaacgcaca aaaaatataa aaaacaaaaa atataaaaac 5581 caagatatag atgaaggcat ggggagatat ctaaaatcta gtacgaagat ggttaaataa 5641 aatttactgt gtatctgtgt atgttataaa tgtaattgta attgtatgtt aaaaataatg 5701 cgcgatcagc aaacaaattt ccatataaac acaatagcga taatgctaga tatataatat 5761 atatttaaat accactaaat gtctgtgtgt ctagaatagg agaaagtatg tagtagagga 5821 cgaagaggag gaggaggagg cttttgggag aaaggacaac cgaaaaaaca aaaacaaaac 5881 aacccataag aacaaccgag caaaatctaa ttttcgagct aaactaaatg tgcatctcag 5941 tgtgtgtgtc tgtatatgta tgtttgtcat ccaactagat atacactata taattatata 6001 gctaccatat aagcaaaaaa tgataattac tacgaaacgg caaaggaaat ctcccataaa 6061 aaatatgaaa aaaaaaacca agaaaaacga agaaaataaa actcaaattt ccccccacac 6121 tcgaatctcc actgattgtc taattgatat ttgcattagc caggcatata atccttaatg 6181 taatactctc tctatctgtc tctctgaaaa acgaaaacga taacgaaaaa aaccaaaatg 6241 tgtgtgtgta ctgtatcaaa ttagcgaaac aacaaattat acaatttcta cccatgtacg 6301 catatatttt aactaaacaa aaaagaaagc gaggatcaga tcagatattc agaaataaac 6361 aaaaggtaag gcagcagaaa ataataatat ttgacaacag gcagaggcaa ataagtaaaa 6421 aattgtagac aacatacgcc taagtgttat tccttgtaat tgagcattaa ttttttatat 6481 aaaaccgaaa cttaattatg taattgtgtg tatcttgtgt ctgaaacgga cctcaaactt 6541 aaaggaagta aaaaataacg cgatttctgt tgccaacaaa aaacagaagg cagaaaaata 6601 agcactcaaa gtaaaattaa aacaaaaaaa aaaagataaa aaccaataac gagagaaaaa 6661 gaaaagaaaa acttaaccat tatatagtat aatttgtata gatgtgtgtc tattgcatta 6721 tttgtacacg tacatatata taccgtctat atattaccgt atatatgtgt atgcatttat 6781 ttatatacgc taaactgaaa agaaaaaaag aaaaaccaag caaatatgtc taaacgaaac 6841 gaacaaaaaa atgcaaaaca aaacgaacaa aaaaattgta attgacgtga tgtgtaatga 6901 tatttttaaa agcaaatttt atgccacgcc catgccaagc agccacgccc cctttttaac 6961 aaaaagggcg atttcccccc cctcttcccg cgcggaacgc agccactttc cccccgtccc 7021 gctcgcccag taattccaaa tctcactccc acgctctcca gatcacggat cccatggatc 7081 catacataaa tcctccaggt cagagatggt cagttgctcc tggactccat ccaatgggct 7141 ggtagcgatg tggaggcgcc tcaaccaaga gacgagagag aaaataatac gaaatcaaat 7201 caaagaaaaa caaaaataaa tttgtgggca ttttccaaat atttgtgaag ca