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LOCUS XM_070218530 7261 bp mRNA linear INV 09-DEC-2024 (RhoGAPp190), transcript variant X1, mRNA. ACCESSION XM_070218530 VERSION XM_070218530.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7261 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7261 /gene="RhoGAPp190" /note="Rho GTPase-activating protein 190; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056706" CDS 28..4917 /gene="RhoGAPp190" /codon_start=1 /product="rho GTPase-activating protein 190 isoform X1" /protein_id="XP_070074631.1" /db_xref="GeneID:108056706" /translation="MRQFNISVIGLSGTEKDRGQVGVGKSCLCNRFMRPMADDYFIDH ISVLSQSDFSGRIVNNDHFLYWGDVRKTTEEGVEYQFNIIEQTEFMDDSTFQAFKVGK MDPYSKRCTATKVFSAEKLMYICKNQLGIEKEYEQKVMPDGRLSIDGFVVVFDVSPVP NRSVEKQVEFVQNVIATILKNKKPLVLVTTKNDDAYELYVREAEKISQRKDYKSTVQL IETSAHESINIDLAFLLLAQMIDKVKNRVKIISYQESAKSRKELLDTRSEAVTRLIRN QITDYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLHQYL DKFALALEYLLPDIGALNISDDDAWECARNYLQNHIEFEQYFFECPQASWTELVDMDE AEDEARIPFDVLETSEAETVFRNYLNSVQQDKKKIGWKQQFKMLLEESGFVTPGKQLS EVRVLFMGRECFEALSEHDCQQIYDIHQDDIIEKSKQNFVELLLEHAQYFLQFKNVDN ITQEDVRQITDVIQEDSRYKMLDRLDQERRLMLVQHLRFIHCPIRDHCPFFYNCVDSL IEEVLSDKSASNHKTPSNVGGWKTSGSGSDRTLNLLIVGSEHLASDLLNDIRICTGSK GEYIYENQTYYLNYRIANGDMEAFKAIDVYSSGLICVYSNQQSFETLKDNLERTLLCN LELEDKFENLPIVLVYQPQDLKENEVEYLRNEGMRLSEMLHCDFIDHTQNHQKYVYDI LNIVILSLKLTEMKSYEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVAESTLVKANE HSIIIDVFIGDAKRRVEFILSSYHGTSQYRDELIHGYIYFYSAKRRSSLANLSILAAQ NANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFY NPFLKTAWDNKYEVENLHVEESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTD GSGSENYEMAPTRSLNSLNEERDISLDEIYDDNEKPKHLHQRFQIFPPPTTPPEPAPP DHQLITCTYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLEDKSDGRRNMNKNSI WNNFSGSTHAYTTGRRHIDSNLNKIRPKGPSQTLKVGEAPSRNCPAMSSSTFTLPTQQ PGKLNMKNFQLVSDAVAKMNFTGSGSGSGSGSGSGSTGLGLGLGTGGSGSMADSYLEP CDKDGKRYDHAQLDGEDEDSEELAEYEQIYENEDCTESDSCASSTERRVRQQNAYYKA NSKKPVAAKKQKKKKVAIPVQTPRVPPFGSYVSPPEIPLHYQRMVVGGGGGGGGGPGE KKKPEPCVPDFMKSDKSPEYSMVPELAAAGIFGAENIPEYSAKCLKEYEKLEKLEKRR IKEETARLRKLQEKEKEQEKKLKRKLKQNSKGLVESAEAQFGKLMISSEQGEIPIFLN KCVEFIEKEGLDSEGIYRVPGSRAHVDMLFQRFEDDTNTEIDALDIPVNAVATALKDF FSKRLPPLFSKDIIKELEEIAGSRGVGNSKLNVEVKTDRSCRLIALKSLLQKLPPINF AILKYIFQHFVHVSDNSKLNSMDSKNLAICWWPTLIPIDFTDMGHFEQLRPYLEDIVQ TMIDQFPYLFCGKDAFVMV" misc_feature <469..741 /gene="RhoGAPp190" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 595..606 /gene="RhoGAPp190" /note="G4 box; other site" /db_xref="CDD:206648" misc_feature 691..699 /gene="RhoGAPp190" /note="G5 box; other site" /db_xref="CDD:206648" misc_feature 787..1026 /gene="RhoGAPp190" /note="p190-A and -B Rho GAPs FF domain; Region: RhoGAP-FF1; pfam16512" /db_xref="CDD:465153" misc_feature 1822..2274 /gene="RhoGAPp190" /note="pseudoGTPase domain found in the family of p190RhoGAP; Region: pseudoGTPaseD_p190RhoGAP; cd22207" /db_xref="CDD:412064" misc_feature 4282..4884 /gene="RhoGAPp190" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an...; Region: RhoGAP_p190; cd04373" /db_xref="CDD:239838" misc_feature order(4387..4389,4501..4503,4513..4515,4759..4761, 4768..4773,4855..4857) /gene="RhoGAPp190" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239838" misc_feature 4387..4389 /gene="RhoGAPp190" /note="catalytic residue [active]" /db_xref="CDD:239838" polyA_site 7261 /gene="RhoGAPp190" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaaatacga aaaccaggta cgtcaagatg cgtcagttta acatctcggt cattggacta 61 tccgggaccg aaaaggaccg cggccaggtg ggcgtgggca agtcatgcct gtgcaacaga 121 ttcatgcgcc caatggccga cgactacttc atcgatcaca tatcagtgct cagccagagc 181 gacttcagtg gccggatcgt gaacaacgac cactttctct actggggcga tgttcgcaag 241 acgacggagg agggcgtcga gtatcagttc aatatcatcg agcagaccga attcatggac 301 gactccacct tccaggcctt taaggtgggc aagatggatc cgtactccaa gcgttgcaca 361 gccaccaagg tcttttcggc ggagaaacta atgtatatat gcaagaatca gttgggcatc 421 gagaaggagt acgaacagaa ggtgatgccc gatggccggc tgagtatcga tggctttgtc 481 gtcgtcttcg atgtgagtcc cgtgcccaat cgcagtgtgg agaagcaggt ggaatttgtg 541 cagaacgtca tagccaccat attgaagaac aagaagccgc tggtgctggt gaccacgaag 601 aacgacgacg cctacgagct gtacgtacgc gaggcggaga agattagcca gcgcaaggac 661 tacaagagca ccgttcagct gatcgagaca tcggcccacg agagcatcaa catcgatttg 721 gccttcctcc tgctcgccca gatgatcgac aaggttaaga accgggtcaa gatcatctcg 781 taccaggagt cggccaagtc gcgcaaggag ctactggaca cgcgttccga ggcggttacg 841 cgactcattc gcaaccagat caccgactat catgtgctgt ggtcgcaggg ctccaagatg 901 ctgtcgcagt atcgcgaatg gaacgagttc ctcaacatct ttggccacga ggcaggccag 961 aagctctttc ggcggcatat gaagaagctg cgcgacgatc atctcaacaa gaagctgcat 1021 cagtatttgg acaagttcgc tttggccctg gaatacctgc tgccggatat cggggctttg 1081 aatatcagcg acgatgatgc gtgggagtgc gccaggaatt atctgcagaa tcacatcgaa 1141 ttcgagcagt acttcttcga gtgcccgcag gcctcgtgga cggagctggt ggacatggac 1201 gaggcggagg acgaggcacg cattccgttc gatgtgctcg agacctccga ggcggagaca 1261 gtcttccgta attacttgaa ttcggtgcag caggacaaga agaagattgg atggaagcag 1321 caattcaaga tgctgctcga ggagtccggc tttgtgacgc ccggcaagca attgtccgag 1381 gtgcgagtcc ttttcatggg ccgcgaatgc ttcgaggctc tgtcggagca cgactgccag 1441 cagatctacg acatccacca ggacgacatc atcgagaaga gcaagcagaa ctttgtggag 1501 ctactgctgg agcatgccca gtactttctg cagttcaaga acgtggacaa tatcacgcag 1561 gaggatgtcc gccagatcac ggatgtcata caggaggatt cgcgctacaa gatgttggat 1621 cgtttggacc aggagcggcg gctgatgctc gtccagcatt tgcgcttcat ccactgcccc 1681 atccgggatc actgcccctt tttctacaac tgtgtcgata gcctgatcga ggaggtgctg 1741 tccgacaagt cggccagcaa tcacaagacg cccagcaacg tcggcggttg gaagacatcg 1801 ggcagcggca gcgatcgcac gctcaatctg ctgatcgttg gctccgagca tctggccagc 1861 gatctgctca acgacatacg catctgcacc gggagcaagg gcgagtacat ctacgagaac 1921 cagacgtatt atctcaacta ccgaatcgcc aacggcgaca tggaggcctt caaggccatc 1981 gatgtctatt cgagtggtct catttgcgtg tactccaacc agcaatcctt tgagacgctc 2041 aaggataact tggagcgcac gctgctctgc aacttggagc tggaggataa gttcgagaac 2101 ctgcccatcg tgctcgtcta ccagccgcag gatctcaagg agaacgaggt ggagtacttg 2161 cgcaacgagg gcatgcgact gtcggagatg ctgcactgcg acttcatcga tcatacgcag 2221 aatcaccaga aatatgtcta cgacatactc aacattgtca tcctgtcact gaagctgacc 2281 gagatgaaga gctacgagcc atatccctcc aatcacaccg atctgcggat cctgtgctgc 2341 atcttctgtg gcgatcagta cgatatcgag aacattgtgc agccgctggt cgccgaatcg 2401 acgctggtca aggccaacga gcactcgatc ataatcgatg tcttcatcgg cgacgccaag 2461 cggcgggtcg agtttatcct gtcttcatat cacggcacta gccagtaccg cgatgagcta 2521 atccatggct acatttactt ttactccgcc aagcgtcgat cttcgttggc gaatctaagc 2581 atcctggcag cccagaatgc caacattcca ttgcagatta tcgcggtgac cgagagcggg 2641 ggcgtaaatg cctttttcaa cagcgatatt tgccagtttt tgatcaccga gggcaatgcg 2701 gtggccgatc gcttcaaggg cagctttatg accttctcgg cggatcagta tgtcaagttt 2761 gcgttctata atccattcct gaagaccgcc tgggacaaca agtacgaggt ggagaacctg 2821 catgtggagg agtcaattac tttggattcg ggcgagggca cgctggagaa ctcggttaac 2881 cagatgccac gcccgccgcc gcgccacgag agctacatgc tgtccaatac gctgggaacc 2941 gatggttccg gcagtgagaa ctacgaaatg gctcctaccc gatctctcaa ctcattaaat 3001 gaagaaagag atatatcatt agatgaaatc tacgatgaca acgaaaagcc caagcacctg 3061 catcaaagat tccagatatt ccctcctcca acaactcctc cagagccagc ccctccagat 3121 catcagctca ttacatgcac atataagagt caattcgttt cggcttcaga atcaagtttg 3181 gaagaaataa catccgatgt cagcgggtcc aaggattcac tggccaccca tgatgcagag 3241 tggctggagg ataaaagcga cgggcggcgc aacatgaaca agaactcgat ttggaacaac 3301 tttagcggat cgacacatgc ctacaccacc ggccggcggc acattgactc caatctgaac 3361 aagatccgcc cgaagggacc cagccaaacg ctgaaggtgg gcgaggcgcc cagtcgcaat 3421 tgcccggcga tgagctcctc caccttcacc ctgcccaccc agcagccggg caagctgaat 3481 atgaagaatt tccagctggt cagcgatgcg gtggccaaga tgaatttcac cggatccggt 3541 tcgggatcgg gatcaggctc gggatccggt agcaccggtt tgggcttggg cctgggcacc 3601 ggcggcagtg gcagcatggc ggactcgtat ctggagccct gcgacaagga tggcaagcga 3661 tacgatcacg cccagttgga tggcgaggat gaggattccg aggagctggc cgagtacgag 3721 cagatctacg aaaacgaaga ctgcaccgaa tccgacagct gtgccagttc cacggagcga 3781 cgggtgcgcc agcagaacgc ctactacaag gccaacagca agaagccggt ggccgccaag 3841 aagcagaaga agaagaaggt ggccattccg gtgcagacgc cgcgtgttcc tccgttcggc 3901 tcatatgtga gtccgccgga aattccgctg cactaccagc gaatggtcgt tggcggcggg 3961 ggcggaggcg gcggcgggcc aggtgagaaa aagaaacccg aaccttgcgt tcccgatttc 4021 atgaagagcg acaaatcgcc tgagtattcc atggtgccag agctggcggc tgctgggatc 4081 ttcggtgcgg agaatatacc cgaatatagc gccaagtgct tgaaggaata cgagaagttg 4141 gagaagctag agaagcggcg catcaaggag gagacggcca ggttgcgcaa gctccaggag 4201 aaggagaagg agcaggagaa gaagctcaag cgcaagctga agcaaaactc caagggtctc 4261 gttgaatcgg cggaggcgca gtttggcaag ctgatgatta gctccgagca gggtgagatc 4321 cccattttcc tcaacaagtg cgtggaattt atcgagaagg agggcctgga ttccgagggc 4381 atttatcgag tgcccggcag cagggcgcat gtcgacatgc tattccaacg attcgaagat 4441 gataccaaca ccgagattga tgcgctggac attcccgtta acgcagtggc cacggcactc 4501 aaggactttt tctccaagcg cctgccgccg ctgttcagca aggatatcat caaggagctg 4561 gaggagattg ccggttcccg tggcgtgggc aattccaaac tgaatgtgga ggtcaaaacg 4621 gaccggagtt gccgcttgat agctttaaaa tcgctgctcc aaaagctgcc gcccatcaac 4681 tttgccatac tcaaatacat attccagcac tttgtgcacg tctcggacaa ctcgaagcta 4741 aatagcatgg acagcaagaa cctggccatc tgctggtggc ccacactcat tcccatcgac 4801 ttcaccgaca tgggccactt cgagcagctg cgtccgtatc tggaggacat tgtccagaca 4861 atgatcgacc agttcccgta tctgttctgc ggcaaggatg cttttgtcat ggtctaggcc 4921 tagatccccg ccagatcatg gcgcacttgg actttcactt gaccgccgga cgcgaagcca 4981 aaacgagata gttagattca atgtgcgagt gtatgaatgt gggcgccatc cagtgccatg 5041 tgtgctttgt gttttctggg tgatcaagat gtaaggagta atagccatag gaaggaaaga 5101 aggagggaag aaaggaagga aaggaaggtt agcaggaggc agcccatcga tcgatcgatt 5161 cattcaaatg aggatcagca gccaggcata tacatattta taatagtata taatatatac 5221 ttgggtctat tgtgtgcgat ttgtgtgatt gtgcgtgcgt gcgtgtgcgt atgtgagaac 5281 agaacttggc taagtagggt atatttattt tttatatata caatatatat tttgtatcga 5341 tggctttgtt gtgtttccgt gatatatgta aacgcgtcaa gtattctctc tctgtgtgtg 5401 gtgcgtcctt tagtcgttga atccattgag tgagacctcc cctcgccgcc ccccagaccc 5461 cacccccaaa aaagtcttct aactccaagc tccatctaaa ctcctcccat caacaaaacg 5521 aacaaagggg cggggcgggg gcgccaacga caacgcacaa aaaatataaa aaacaaaaaa 5581 tataaaaacc aagatataga tgaaggcatg gggagatatc taaaatctag tacgaagatg 5641 gttaaataaa atttactgtg tatctgtgta tgttataaat gtaattgtaa ttgtatgtta 5701 aaaataatgc gcgatcagca aacaaatttc catataaaca caatagcgat aatgctagat 5761 atataatata tatttaaata ccactaaatg tctgtgtgtc tagaatagga gaaagtatgt 5821 agtagaggac gaagaggagg aggaggaggc ttttgggaga aaggacaacc gaaaaaacaa 5881 aaacaaaaca acccataaga acaaccgagc aaaatctaat tttcgagcta aactaaatgt 5941 gcatctcagt gtgtgtgtct gtatatgtat gtttgtcatc caactagata tacactatat 6001 aattatatag ctaccatata agcaaaaaat gataattact acgaaacggc aaaggaaatc 6061 tcccataaaa aatatgaaaa aaaaaaccaa gaaaaacgaa gaaaataaaa ctcaaatttc 6121 cccccacact cgaatctcca ctgattgtct aattgatatt tgcattagcc aggcatataa 6181 tccttaatgt aatactctct ctatctgtct ctctgaaaaa cgaaaacgat aacgaaaaaa 6241 accaaaatgt gtgtgtgtac tgtatcaaat tagcgaaaca acaaattata caatttctac 6301 ccatgtacgc atatatttta actaaacaaa aaagaaagcg aggatcagat cagatattca 6361 gaaataaaca aaaggtaagg cagcagaaaa taataatatt tgacaacagg cagaggcaaa 6421 taagtaaaaa attgtagaca acatacgcct aagtgttatt ccttgtaatt gagcattaat 6481 tttttatata aaaccgaaac ttaattatgt aattgtgtgt atcttgtgtc tgaaacggac 6541 ctcaaactta aaggaagtaa aaaataacgc gatttctgtt gccaacaaaa aacagaaggc 6601 agaaaaataa gcactcaaag taaaattaaa acaaaaaaaa aaagataaaa accaataacg 6661 agagaaaaag aaaagaaaaa cttaaccatt atatagtata atttgtatag atgtgtgtct 6721 attgcattat ttgtacacgt acatatatat accgtctata tattaccgta tatatgtgta 6781 tgcatttatt tatatacgct aaactgaaaa gaaaaaaaga aaaaccaagc aaatatgtct 6841 aaacgaaacg aacaaaaaaa tgcaaaacaa aacgaacaaa aaaattgtaa ttgacgtgat 6901 gtgtaatgat atttttaaaa gcaaatttta tgccacgccc atgccaagca gccacgcccc 6961 ctttttaaca aaaagggcga tttccccccc ctcttcccgc gcggaacgca gccactttcc 7021 ccccgtcccg ctcgcccagt aattccaaat ctcactccca cgctctccag atcacggatc 7081 ccatggatcc atacataaat cctccaggtc agagatggtc agttgctcct ggactccatc 7141 caatgggctg gtagcgatgt ggaggcgcct caaccaagag acgagagaga aaataatacg 7201 aaatcaaatc aaagaaaaac aaaaataaat ttgtgggcat tttccaaata tttgtgaagc 7261 a