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LOCUS XM_070218524 5346 bp mRNA linear INV 09-DEC-2024 raskol (raskol), transcript variant X3, mRNA. ACCESSION XM_070218524 VERSION XM_070218524.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5346 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5346 /gene="raskol" /note="Ras GTPase-activating protein raskol; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056689" CDS 229..4968 /gene="raskol" /codon_start=1 /product="ras GTPase-activating protein raskol isoform X3" /protein_id="XP_070074625.1" /db_xref="GeneID:108056689" /translation="MNCGALRAISDELQMQTVNSPTTTTPQQRKMHSMPRTAPQSSAA TQNAAQNSTPQANSHHPSRSVDQQQPQSAALRRSTMPRGRGLASCLRGERDDAPTPPI HEVHCDVQQLQLLQQQQQQQQHQPQQQHQLLLQQHEQLQQERMSGSGSGASTMETTGR SEYKSKTLPRIHFDTALNDTSLNEDTSYEKACRRGSAPTTPILGSKQHQSENNATSRF TNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVG VAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDN SLKMWVYEAKNLPPKKRYFCELQLDKTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVI TVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRVPCEQWYPILSDKAGDSLGRTSGGG GSSGSKDKEQLPTLRIKCRFQSTDILPINVYANFLAYLKENYKRVCETLEPVIGVKAK EDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGE QYLQDTLSAPINELIQSERDCEVDPTKASGSSAGSLQRQQAALRGAVRGAWQCIFESH KHFPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSLFNITSELPS ARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHP APDSILDWAGYIDQGKQLSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGN LGTALPGGYLPASSSSTHSIASENQENRQPANPDQLLLQQQQSQLAQPQHAIVSKPLS AERGIMRGVLTPNSLEKNIFRYNDPTVNGVLQQQQLQQQQMQQQQLQQHPHHHSQTSI AGNQYLSSPGGLQHAQSQTSMASSSLNGSSSNLLHQQQQQHVHPMQHPHYCPPAPQTS ASSTMERMNPYPYLAHNGNEYEASTPSSTRSRTLPRNGNGSGHPMGNNNQSGSYDDMH GEFQIQISGLDTSSAFVCKSPTPMMKSSLVGGASQAGGGARGHHKLNLGIPDHSGVYV RGGCLNPNSNMPKNLEDLDDLFKYAEEHDVAEHHQHSQQNHQQNHQQQQSHLKPNPGL PPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPVESQLKAAMGSHNAPLAFKNPSYQL QPSQAGRSSAPSNPQQQFGSRLKPIGGGLVAARAAFLNSGGNLETAAATLTPSSSDEQ LSADNYFSYAAAAAAGAGLSGKMEAQRSLSGGSSSSTSASAASTSNLGKNGGGSTAYG RLNGPLKREDVYGAAAGHHQQQQQQQLQQQRDRERDQELKQYAGSVAGSVGSATSAAQ RRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLRSSGGSGEGKGNGNGNGYDQNGEI QLLQQTLDTLCHTLDRDEAELRDSSDELFGIQRPAGSAGSNGSNNLSLQSESTMRSII DSFFQSSCRLITMEEELRREQLKMSLALSHKQRVIEEQGQQIAALDAANSRLLSALTA LRQRYETQQQQQQQQQHQAPPKTQKPQ" misc_feature 880..1224 /gene="raskol" /note="Synaptic Ras-GTPase activating protein family Pleckstrin homology (PH) domain; Region: PH_RasSynGAP-like; cd13262" /db_xref="CDD:270082" misc_feature 1198..1662 /gene="raskol" /note="C2 domain present in Ras GTPase activating protein (GAP) family; Region: C2_SynGAP_like; cd04013" /db_xref="CDD:175980" misc_feature 1633..2616 /gene="raskol" /note="Ras-GTPase Activating Domain of DAB2IP and similar proteins; Region: RasGAP_DAB2IP; cd05136" /db_xref="CDD:213338" misc_feature order(1750..1752,1858..1860,1864..1866,1870..1875, 1879..1881,1888..1890,1900..1902,2185..2187,2209..2214, 2221..2226,2233..2235,2296..2298,2305..2310,2317..2319, 2329..2331,2335..2337,2350..2355) /gene="raskol" /note="putative RAS interface [polypeptide binding]; other site" /db_xref="CDD:213338" misc_feature <4687..4899 /gene="raskol" /note="Domain of unknown function (DUF3498); Region: DUF3498; pfam12004" /db_xref="CDD:463427" ORIGIN 1 tcccagtcgt tttcagtcga ttttaagctt ccggcgcagg cggttcaaat cgctccgttc 61 ggaaaccatg tcaaggttaa agaaaaactg aactaacaga aactaaaaaa taaaagaaaa 121 caaatcaatt aacaaaacta ccaaggcaac gaaaaccaaa aatccacaaa ggcaactttg 181 gcaaggaaac ccaataccaa atagaagata cagctaacca aaatcagaat gaactgcggt 241 gctttgcgtg caattagcga cgagctgcaa atgcagacgg taaattcgcc aacgacgacg 301 actccacagc agcgaaagat gcactccatg ccgcgtaccg ctccgcagag ttcagctgcc 361 acccagaatg ccgcccaaaa ctcaacgccc caggcaaatt cccatcatcc atcgagatcc 421 gtggaccagc agcaacccca gtcggcggct ttgcggcgga gtacgatgcc ccgtggcagg 481 ggattggcct cctgtttgag gggcgaacgg gatgatgcac ccacgccgcc cattcacgag 541 gttcactgcg atgtgcagca gctgcaatta ttgcaacagc agcagcaaca gcagcaacat 601 cagccgcaac agcaacacca actgctactg cagcagcatg agcaactgca gcaggagcga 661 atgtctgggt caggatcggg tgcttctacc atggagacga cgggcaggag tgagtacaag 721 tcgaagacac tgcctcgcat acatttcgat acggcgctaa acgatacgtc gctgaatgaa 781 gatacttcct atgagaaggc gtgccgccgt ggatcagcgc ccactacgcc gattttgggc 841 agcaaacagc accagtcgga gaacaatgcc acctcgcgat tcaccaactt cttttccaaa 901 aaatccaatc ccctgaagcg gaccaagtcg gtgaccaaat tggagcgtac caagcgcgga 961 tccggcggac tgaggggctc ccgctcgcac gagagtctgc tgtccagtca cgccgtcatg 1021 tcgaccatag atctctcctg cactggggcg gtgggcgtgg cgccggtgca ccagtcagtc 1081 ctcgggcggc gtcactgctt tcaggtgcgc ggcgggccgc gtggcgagcg ctactactcg 1141 tgcggatcgc gccaggagcg cgatctctgg atctactcgc tgcgcaagtc gatagccccg 1201 aatgccgagc acactcgccg cacggacaac tcgctgaaga tgtgggtcta cgaggcgaag 1261 aatctgccgc cgaagaagcg ttacttttgc gaactgcagc tggacaaaac gctctacggg 1321 cggacgtcgg tgaagctgca gacggatctg ctcttctggg gcgagcattt cgatttcccc 1381 gacatcccag agatcaatgt gatcacggtg aacgtttttc gggaggtgga caaaaagaag 1441 aagcgggaca agtatcagtt tgtgggttca gtgaagatac ccgttcacga tgtgacctcg 1501 cgagtgccct gcgagcaatg gtatcccata ctcagcgaca aggcgggcga tagtctgggc 1561 agaacttctg gaggtggtgg atcgagtggt tcgaaggaca aggagcaact gcccacgctg 1621 aggatcaagt gccgtttcca gagcaccgac atcctgccca tcaatgtgta tgccaacttt 1681 ttggcctatc tcaaggagaa ctacaagaga gtttgcgaaa ctctagagcc cgtgattggt 1741 gtgaaagcca aggaggatat aggacaggca ctggttctcc tcatgcatgc ccagggatta 1801 gccggagcct ttctcaccga tgtggttgcc ctggatttac tacgcgtcgg tgatcagcga 1861 ctgactttta ggggcaactc gctggccacc aagagcatgg aggcgtttct caagctcacc 1921 ggcgagcagt atctgcagga taccctctcg gcgccaatta acgaactcat ccaatcggaa 1981 agggattgcg aggtggatcc cacgaaggcg agcggttcgt cggcgggttc actgcagcgt 2041 cagcaggccg ctttgcgtgg agcggtgcga ggggcgtggc agtgcatctt cgagtcgcac 2101 aagcattttc ccgcccagct gcgtaattgt tttgccacct tccgggagcg cctgcaacaa 2161 ttgggccgcc aggatatggc cgacaacctg atctcggcca gcatctttct gcgtttcctg 2221 tgccccgcca tcctgtcgcc gtcgcttttt aatatcacca gcgaattgcc ctccgcaagg 2281 gccactcgca atctcacttt ggtggccaag accctgcaaa cgttggccaa tttcacgagg 2341 tttcagggca aggagaactt tatggagttc ctgaatgatt tcctcgaaca ggaggccgct 2401 cgcatgcagc agtttctgga gattatatcg acaaggcccg agcatcctgc tcccgattcg 2461 atactcgatt gggcggggta cattgatcag ggcaagcagc tctccatttt gcacagcctg 2521 ctcagcgaga gtctggccaa gctgccggag gccaggcagc acgagttgga tccactgcag 2581 cacattctcg acgagattag ccgggccaag gagcatggga atctgggaac agctctgcct 2641 ggaggatatc tgccggcctc ctcctcgtcg acgcactcga tagccagcga gaatcaggag 2701 aatcgacagc cggccaatcc ggatcagttg ctgttgcagc agcagcaaag tcagctggcc 2761 cagccgcagc atgcgattgt cagcaagcct ctgtcggcgg agaggggcat tatgcgggga 2821 gttctgaccc cgaattcttt agagaagaac atctttcggt acaatgatcc cacggttaat 2881 ggggtattgc aacagcagca gttgcaacag cagcagatgc agcaacagca gttgcagcag 2941 catccccatc atcattcaca aacctccatt gcgggaaacc aatacctaag ttcgccgggc 3001 ggcctgcagc atgcccaatc gcagacctcg atggcctcct cctcgctcaa cggcagcagc 3061 agcaatttgt tgcatcaaca gcaacagcaa catgtccacc ccatgcagca tccacattac 3121 tgcccgccgg cgccgcagac gagtgcctcc agcaccatgg agcgaatgaa tccgtatcct 3181 tatttagcgc ataatggcaa cgagtacgag gccagcacgc catcgagcac tcgcagcagg 3241 acactgccac gaaatggaaa tggaagtggt catcccatgg gcaataataa ccagagcgga 3301 agctacgacg acatgcacgg cgagttccag atacagattt ccggattgga tacgagcagt 3361 gcttttgttt gcaagtcacc cacgcccatg atgaagtcca gtttggttgg aggagcaagt 3421 caggctggtg gaggagcaag aggccaccac aagctgaatc taggaatacc cgatcattcg 3481 ggggtttatg taagaggcgg ctgcctgaat cccaactcga atatgcccaa gaacctggag 3541 gatcttgacg atctgttcaa gtacgccgaa gagcacgatg tggcggagca tcaccagcac 3601 agccaacaga atcatcagca gaatcaccag cagcagcaga gtcacctgaa gccaaatcca 3661 ggattaccac ccggcaagga gcagctgtcg gcgaagagca gccactgcag ctccggctac 3721 cagagcatct ccaccaatcc ctcgccctcg cagtcctcca gtcccgtgga gagccagctg 3781 aaggcagcga tgggcagtca caatgcgccg ctggccttca agaatccctc ctaccagctg 3841 cagccgagtc aggcgggcag atcatcggca cctagtaatc cccagcaaca gtttggcagc 3901 cgcttaaagc ccattggagg tggcctagtg gccgctagag cagcttttct caacagcggt 3961 ggcaacctgg agacggcggc ggctacactg acgcccagtt cctcggacga acagctctcg 4021 gcggataact atttcagcta tgcagcggca gcggcggccg gagcgggatt gtccgggaag 4081 atggaggcac agcgctcgct cagcggcggc agcagctcct ccacttcggc ctctgccgca 4141 tccacctcaa atctgggcaa gaatggcggg ggttcaacgg cctacgggcg gctaaatgga 4201 ccgctcaagc gggaggatgt ctacggggca gctgcaggac accatcagca gcagcagcag 4261 cagcagttgc aacagcagag ggatcgggaa cgggatcagg aactcaagca gtatgcaggc 4321 agtgtggcgg gcagcgtggg ctcagccact tcggcggccc agaggcgact gagcttggac 4381 tcggcgcgaa cgctttccga cagcagcacg gatacggaag gacactgcaa tcaattgcag 4441 gagggcaagc gacgcaggca gttgcgcagc agcggcggca gcggcgaggg aaagggcaat 4501 ggcaatggca atggctacga ccagaacggg gagatccagc tgctgcagca gaccctggac 4561 acgctctgcc acacgctcga ccgcgacgag gccgagctgc gcgactccag cgacgagctg 4621 ttcggaatcc agcggccagc gggcagcgcc ggcagcaatg gctcgaacaa tctcagcctg 4681 cagtcggagt ccaccatgcg cagcatcatc gacagcttct ttcaatcctc ctgcagactc 4741 atcaccatgg aggaggagct gcggcgcgag cagctcaaga tgtcgctggc gctgtcgcac 4801 aagcagcgcg tgatcgagga gcagggccag cagatagcgg ccctggatgc ggccaacagt 4861 cggctgctga gcgccctgac cgccctgcgc cagcggtacg agacgcagca gcagcagcaa 4921 cagcagcagc agcaccaagc accaccaaag acccagaagc cacagtgatg agcggatggg 4981 gggcaggaat cgaaggagga ggaggaggag gaggaggaga agtcctggac aaactgacaa 5041 gcatgcggac accgtcttaa ggataccttt ttgtttattt tttttagcta ttttttttcg 5101 tatgctacat aaattatact acatgtttaa tatatagtta cacataacaa tacatacatt 5161 atacataatt tctcaatata tgtttaaaaa ccaaccacaa aatgtgaaaa taatgctaaa 5221 cgcagctgca agagcagtga gataaaaacc ccagaagatc ggagcatgga agtgaagaag 5281 aaacaagaac aagttaagat aatgaataaa attataacca aagttagaca aaaatgagaa 5341 aaagct