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PREDICTED: Drosophila takahashii Mitochondrial assembly regulatory


LOCUS       XM_070218517            3515 bp    mRNA    linear   INV 09-DEC-2024
            factor (Marf), transcript variant X1, mRNA.
ACCESSION   XM_070218517
VERSION     XM_070218517.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3515
                     /gene="Marf"
                     /note="Mitochondrial assembly regulatory factor; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108060313"
     CDS             507..2975
                     /gene="Marf"
                     /codon_start=1
                     /product="transmembrane GTPase Marf isoform X1"
                     /protein_id="XP_070074618.1"
                     /db_xref="GeneID:108060313"
                     /translation="MAAYLNRTISLVTGQTGPAANDDDRHSSSTDTVDKSSLSRLNSS
                     LQPSGSTTAANLLPESRLYQSNDKSPLQIFVRAKKKINDIYGEIEEYVHETTTFINAL
                     HAEAEIVDKAERELFESYVYKVAAIREVLQRDHMKVAFFGRTSNGKSSVINAMLREKI
                     LPSGIGHTTNCFCQVEGSNGGEAYLMKEGSDEKLNVVNIKQLANALCQEKLCESSLVR
                     IFWPRERCSLLRDDVVFVDSPGVDVSANLDDWIDNHCLNADVFVLVLNAESTMTRAEK
                     QFFHTVSQKLSKPNIFILNNRWDASANEPECQESVKSQHTERCIDFLTKELKVSNEKE
                     AAERVFFVSARETLQARIEEAKGNPPHMGAIAEGFQMRYFEFQDFERKFEECISQSAV
                     KTKFQQHSSRGKSVSGDMKSMLDNIYERITIFRNLKQDQKNMLTERIQGTETQMMQVT
                     REMKMKIHNMVEEVEEKVSKALNEEIWRLGVLIDEFNMPFHPERLVLNIYKKELNAHV
                     ESGLGSNLRARLSMALAMNVESAQTEMTDRMHALVPNEQLLATSTKMVVRTQPFEMLY
                     SLNCQNLCADFQEDLEFKFSWGIAAMIQRFTGKVRERSKKGQPALVNRQSSIGHSVST
                     PATTPVEATPVCLLPAPGVAGITPEQLSLISRFAVSSIGSQGTVGGLVVAGIVLMNSY
                     VLKSQHLQMLKTIGWRVLVGVGALYGCIYLYERLSWTNSAKERTFKGQYVRHATKKLK
                     MIVDLTSANCSHQVQQELSSTFARLCRTVDTATTDMNDELKTLDSQLNILEANQKQLK
                     LLRNKANYIQNELDIFEHNYISPQ"
     misc_feature    912..1667
                     /gene="Marf"
                     /note="Dynamin-like protein including dynamins,
                     mitofusins, and guanylate-binding proteins; Region: DLP_2;
                     cd09912"
                     /db_xref="CDD:206739"
     misc_feature    930..953
                     /gene="Marf"
                     /note="G1 box; other site"
                     /db_xref="CDD:206739"
     misc_feature    order(936..956,1224..1226,1392..1397,1401..1403,
                     1533..1541)
                     /gene="Marf"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206739"
     misc_feature    1011..1013
                     /gene="Marf"
                     /note="G2 box; other site"
                     /db_xref="CDD:206739"
     misc_feature    1089..1097
                     /gene="Marf"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206739"
     misc_feature    1215..1226
                     /gene="Marf"
                     /note="G3 box; other site"
                     /db_xref="CDD:206739"
     misc_feature    order(1221..1226,1281..1286)
                     /gene="Marf"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206739"
     misc_feature    1392..1403
                     /gene="Marf"
                     /note="G4 box; other site"
                     /db_xref="CDD:206739"
     misc_feature    1533..1541
                     /gene="Marf"
                     /note="G5 box; other site"
                     /db_xref="CDD:206739"
     misc_feature    2448..2963
                     /gene="Marf"
                     /note="fzo-like conserved region; Region: Fzo_mitofusin;
                     pfam04799"
                     /db_xref="CDD:461432"
     polyA_site      3515
                     /gene="Marf"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgtttggtcc ggcgcggtca cgctgtcacg gttacatcat gtgcattttt taaacagaaa
       61 actttaataa ttttaactaa atttcggtaa attgccgcac tgtcgagcgc cggaaatgta
      121 cggttattgg aggacccagc cacgctttcc acgcatttcc atttccattt gaaaacgcag
      181 cagccgcgcg gcagcaacaa aagaaaacca gagagcggag aaaaagaaac ataaaaataa
      241 atacaaatat aaaacaaata caaaaatatg agcgatagtg gcaacaatca gttttgtgac
      301 gttgattttt gagcaaagac ccccacaaaa aaaaatccaa aatatagtac acaaaaaagt
      361 ttttgagttt ttggcggagg aaaccgaata cctaggctgc ataccttttg ttttgtatcg
      421 aaattctctt cttccccaaa caaaaaccaa caaaaaaaac tcttataaaa ccataaaacc
      481 aaccgaatct tgaaccggat cccgaaatgg cggcctactt gaaccgcacc atctcgctgg
      541 tgaccgggca aacgggcccc gccgccaacg acgacgatcg ccactcctcg tcgacggaca
      601 cggtggacaa atcgtctttg tcccggctca actcatccct acaaccctcg ggctccacga
      661 cggccgccaa tctgctaccc gaatcgcggc tctaccaatc caacgacaaa tcgcccctcc
      721 agatcttcgt gcgcgccaag aagaagatca acgacatcta cggggagatc gaggagtacg
      781 tccacgagac gaccaccttt atcaatgccc tgcatgcgga ggcggagatc gtggacaagg
      841 cggagcggga gctgttcgag agctacgtgt acaaggtggc cgccattcgc gaggtcctgc
      901 agcgggacca catgaaggtg gccttcttcg gacgcacctc caacggcaag agctcggtga
      961 tcaacgccat gctgcgcgag aagatcctgc ccagcggcat tggccacacg acgaactgct
     1021 tctgccaagt ggagggcagc aacggtggcg aggcgtattt gatgaaagag ggatccgatg
     1081 agaagctcaa tgtggtgaac atcaagcaac tggccaatgc tctgtgccag gagaagctct
     1141 gcgagagcag tttggtgcgc atcttctggc cccgcgaacg ctgcagcctg ctgcgcgatg
     1201 acgtcgtctt tgtggactca ccgggcgtcg atgtttcggc caatctggac gactggatcg
     1261 acaaccattg cctcaacgcc gatgtctttg tcctcgtcct gaatgccgag tccacgatga
     1321 cgcgtgccga gaagcaattc tttcacaccg tctcccagaa gctgagcaag ccgaacatct
     1381 tcatcctgaa caatcgctgg gacgcctcgg ccaatgagcc cgagtgccag gagtcggtga
     1441 aatcccagca cacggagcgc tgcatcgatt tcctcaccaa ggagctgaag gtgagcaacg
     1501 aaaaggaggc cgccgagcgg gttttcttcg tttcggcgag ggaaacgctg caggcgcgga
     1561 tcgaggaggc caagggcaat ccaccgcata tgggcgccat tgccgagggc ttccagatgc
     1621 gctactttga gttccaggac tttgagcgca agttcgagga gtgcatctcg cagagtgccg
     1681 tcaaaacaaa gttccagcag cacagttcgc ggggcaagag tgtctcaggg gatatgaaat
     1741 cgatgctgga taatatttac gagcggatta ccatcttccg caatctgaag caggaccaaa
     1801 agaacatgct aaccgaacgc attcagggca ccgagacgca gatgatgcag gttacgcgcg
     1861 agatgaagat gaagatccac aacatggtcg aggaggtgga ggagaaggtg tcgaaggcgc
     1921 tgaacgagga gatctggcga ttgggcgtgc tgatcgatga gttcaacatg cccttccatc
     1981 cggagcgact cgtgctgaat atctacaaga aggagttgaa cgcgcatgtg gagagcgggc
     2041 tgggcagcaa tctgagggcc cggctctcca tggctctggc catgaatgtg gagtccgccc
     2101 agacggagat gaccgatcgc atgcacgcct tggtgcccaa cgaacagctg ctggcgacga
     2161 gcaccaaaat ggtggtgcgc acgcagccct tcgagatgct ctactcgctg aactgccaga
     2221 acctctgcgc cgacttccag gaggatctgg agttcaagtt cagctggggc atagcggcaa
     2281 tgatccagcg attcactggg aaggtgcgcg agcgcagcaa gaagggccag ccggcgctgg
     2341 tcaaccggca gagcagtatt ggacacagcg tatccacgcc cgccacgacg cccgtggagg
     2401 ccacgcccgt ctgtttgctc ccggctcctg gggtggccgg cattacgccc gagcagctgt
     2461 cgttgatctc ccgctttgcg gtctcctcca ttggatccca gggcaccgtg ggcggcttgg
     2521 ttgtcgccgg catcgtgctt atgaatagct atgtgctgaa atcccaacac ttgcagatgc
     2581 tgaaaaccat cggctggcgg gttttggtcg gcgtgggcgc cctctatggc tgcatctacc
     2641 tgtacgagcg gctctcgtgg accaactcgg ccaaggagcg caccttcaag gggcagtatg
     2701 tgcggcatgc caccaagaag ctcaagatga tagtggacct tacctcggcc aattgcagcc
     2761 accaggtgca gcaggaacta tcgagcacct ttgcccgcct gtgccgcacc gtcgacaccg
     2821 ccaccacgga catgaacgat gagctcaaga ccctcgactc gcagctgaac atcctggagg
     2881 ccaaccagaa gcagctgaag ctgctgcgca acaaggccaa ctacatacag aacgagctgg
     2941 acatcttcga gcataactat atatcgccgc agtagaggag aaccaaggaa aaccaaacac
     3001 ccaaacaaac gactacagca tcaatcaatt gaccacgttt ttcgttgctc aactcagttt
     3061 attttctttt ttttttctct ttttttcgat gtaaatgcat gattgagccc ctctttattc
     3121 tattttgttt aaacaaattg ctgttgttgt tgcaaactat tttagtttct ttgtaattgt
     3181 tgaccccgta acccgagaac atatttagaa atatccaaaa cacactgtga gcatggccgg
     3241 gtgccatgga aaaccaagtt aagatgaatt atataaagca taaagcataa aggcaactcc
     3301 ccagaaagcg aaggcctcat ttaccttacc taatctaata gaaagtcttg taattataca
     3361 atattgtttt gaattggatg ctatttaaat gctagactaa tgaaaacggc tcgttttggg
     3421 gtaatgcaaa cacgatataa atagttgttg atgaaatgaa tcatgattca tgaacgaaaa
     3481 cgaaacgaaa taaaagatat ttatgtaaga gaaaa