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LOCUS XM_070218511 3606 bp mRNA linear INV 09-DEC-2024 (LOC108066898), mRNA. ACCESSION XM_070218511 VERSION XM_070218511.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3606 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3606 /gene="LOC108066898" /note="uncharacterized LOC108066898; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066898" CDS 1..3570 /gene="LOC108066898" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070074612.1" /db_xref="GeneID:108066898" /translation="MVGQALIRTPITIMIIPKQPPKKKLSKKEKARLEAEQAELMRIE MEKEKLKKLEEARQRKKLEMEQAKHRQQQEVAENRLRRSQLKDSMLFFDAVRTAIEAI KDGERHERDWEKFMRCNGLPNAASPSDLRKYIHQWHTDIAKRHLESRNWLLRTDERTL LTQDAQVPDLTRISLRQQQGRLGDVYSQRIQEVLGILNELDEMLPFKQKSALIAADLV KLKTEMRVFLKQHLDEFTYKTMSHIERDMEIDRPGVSKHIYNSEVFQSFVWTFSKDAQ IALNPKARIGEQSAHNEIDFPTIEMQISLPPTVYLQSSALRGLRLNYDHFSDYCSSYC LKHARSANANILRQTKREWRKRKEILQAMLDECGREIPLSELEQLTQDQHSASSQPPR ERSYDVDKLYAEYEDELSKAHRRAIGPEAYGMLETDVNLRKYRIIGGVYCIDFLETPQ QDKQLNARSFIRTITSANSLVHKEYYQTYKPPPPVLPGVRRLPEEIEAEMRMIEAALD KLALVTLQLPDSVIWFEPPVACRWETNVETLEMELADGMKPEVAKKSPPGEAGDADDG DATNAVSGTAAATTATPTEATPLSTHAQPSPLKSSPRCPPAAQAHRLRSQKSEISSRQ QVLREINDFDLRAIPSDVDLYGLVKDFVVPRLPQGFCVRLEQSTPIMSTGLRKRKVMF LARQAHVRLGQGLDSDWAGVNVNRDQLTMAQEPKGLGAEFLDTEEPAELFPPLCFDKL LKFRQMAPRSKTLVHHPGYLFSQLIEDMDRLWRLQLPRDQQEELIHQISEQLSPTGSR SSEAGVREADGDDGGEAMAENMQPLSQELVDVLQPAAAAAAFAYYTGISFVRDSQLPA EPEPEADRKDKRSNSMDSSEEDDDDDDDVDSLVELLEGGASTAANTLHDLLGPPTNSE NSDSESKQKMSNAAAITQGKWSTRDVHDTKFNEDKLSIQFRTGRLGIFGFALNKYSNM PYQTWDLRPDMKNPGTIIFSFTASLISLDMTITESGYTVNNFQGGSTQGITDMIGKTL SLADLKAMLILSAVDIFPDEDAFCYTEGSCEKNYVMEMHCYACLSTLAQSHNFSWSRW NLLAGSRTAVLLVRELIEGKKVPYYSTLLVTPLKTSIIDCTEVSASFNAVGIPGMEYY ADLYQLSQAHAQPGSLEKQRTMSPVLRDNVAKILMAIRPLSLC" misc_feature 91..>423 /gene="LOC108066898" /note="Cancer susceptibility candidate 1 N-terminus; Region: Casc1_N; pfam15927" /db_xref="CDD:464947" misc_feature 2803..3393 /gene="LOC108066898" /note="Cancer susceptibility candidate 1 C-terminal; Region: Casc1_C; pfam12366" /db_xref="CDD:432508" ORIGIN 1 atggtaggtc aagcgcttat aaggacgcca attaccataa tgataatccc aaaacagccc 61 ccgaaaaaga agctctcgaa gaaggagaag gcccgactgg aggccgagca ggccgagctt 121 atgcggattg aaatggagaa ggagaaactc aagaagctgg aggaggcccg tcagcggaag 181 aagctggaga tggagcaggc gaagcaccgg cagcagcagg aggtggccga gaaccggctg 241 cggaggtcgc agctcaagga cagcatgctc ttcttcgacg cggtgcgcac ggccatcgag 301 gcgatcaagg atggcgagcg gcacgagcgg gactgggaga agttcatgcg gtgcaacggg 361 ctgccgaatg cggccagccc cagtgatctg aggaagtaca tccaccagtg gcacacggac 421 atcgccaagc ggcatctgga gtcgcgcaat tggctgctgc gcaccgacga gcgcaccctg 481 ctcacccagg atgcccaggt gccggatctc acgaggatct cgctgcgcca acagcaggga 541 cgactgggcg atgtctactc gcagaggatc caggaggttt tgggtatcct caacgagttg 601 gacgaaatgc tgccattcaa gcaaaagtcc gcccttatag ccgccgatct cgtcaagcta 661 aagaccgaga tgagggtgtt cctcaagcaa catttggatg agttcaccta caagaccatg 721 tcgcatattg aaagggatat ggaaatcgat aggcctggtg tttcgaagca catctacaac 781 tcggaagtgt tccagagttt tgtctggacc ttctccaagg atgctcaaat tgccctcaat 841 ccaaaggccc gaattggtga acagtctgct cataacgaga tcgatttccc caccatcgaa 901 atgcaaatct cattgccacc cacggtttat ctgcagagct cagctttgcg gggtctccga 961 ctgaactacg atcactttag tgattactgc agtagttact gcttgaaaca cgcaagatcg 1021 gccaatgcaa atatcctgcg gcaaacgaag cgggagtggc gcaagcgcaa ggagatcctg 1081 caggctatgc tggatgagtg cggcagggag attccgcttt cggagctgga gcagctcacc 1141 caggatcagc actcggccag ctcccagccg ccgcgggagc gcagctacga tgtggacaag 1201 ctgtatgcgg agtacgagga tgagctgagc aaggcccatc gcagggccat cggaccggag 1261 gcctacggaa tgctggagac ggatgtcaat ctgcgcaaat accgcatcat cggcggtgtc 1321 tactgcattg actttctgga aactccgcag caggacaagc agctcaatgc caggtccttc 1381 atccgcacca tcacttcggc taacagcttg gtgcacaagg aatactacca gacctacaag 1441 ccaccgcctc cagttttgcc gggagtgcga cgattgcccg aggagattga ggctgagatg 1501 aggatgattg aggcggcgct ggacaagctg gcattggtaa cgctgcaatt accggattcg 1561 gtgatttggt tcgagccacc tgtcgcctgt cgctgggaaa cgaatgtgga gaccttggaa 1621 atggagctgg ccgatggcat gaaaccggag gtggccaaga aatcgccgcc gggcgaggca 1681 ggcgatgcag atgatggcga tgccacgaat gcggtgagtg gtacggcggc tgccaccacg 1741 gccacgccca ccgaggccac gcccctgtcg acccacgccc aacccagtcc cctgaagagt 1801 tcaccccgct gtccaccggc tgcccaagcc catcgtttgc gttcccagaa atcggagatt 1861 tccagcaggc agcaggtgct gcgtgaaatc aacgacttcg atctgcgtgc cattcccagc 1921 gatgtggatt tgtatggtct ggtcaaggac tttgtggttc cccggttgcc ccaaggattc 1981 tgcgtgcggc tggaacaatc gacgccgatt atgtcgacgg gcttgcgaaa gcgcaaagtg 2041 atgtttctgg cgcgacaggc acacgttcgt ttgggtcagg gattggattc ggattgggct 2101 ggggtgaatg tcaaccggga tcaactgacg atggcccagg agcccaaagg gctgggagcc 2161 gagtttctag acaccgagga gcctgcggag ctatttccgc ccctgtgctt cgacaagcta 2221 ctgaagttcc ggcaaatggc accgcgttcc aagacactcg tccaccatcc aggctatctg 2281 ttctcccagc tgatcgagga catggatcgt ttgtggcgcc tccagctgcc cagggatcag 2341 caggaggagc tcatccatca gatttcggag cagctatcgc ccaccggttc gcgatcgagt 2401 gaggcgggag tgagggaggc agatggagac gatggaggcg aagcgatggc ggagaatatg 2461 cagccactta gccaggagct ggtggatgtc ctgcagcccg cggcagccgc cgccgccttt 2521 gcctactaca cgggcatctc ctttgtccgg gactcacagc tgccggcgga accggaaccg 2581 gaagccgatc gcaaggataa acgatcgaac agcatggata gcagcgagga ggacgacgac 2641 gacgacgatg atgtggacag cctggtggag ctgctcgaag gaggcgcctc cacggcggcc 2701 aacaccctgc acgatctgct gggtccgccg actaacagcg agaatagcga cagcgaaagc 2761 aaacagaaaa tgagcaatgc ggcagccata acgcagggca agtggagcac ccgcgatgtc 2821 cacgatacca agttcaatga ggacaagctc tccatacagt ttcgaacagg aagattgggt 2881 atttttggtt tcgctttgaa taaatacagc aatatgccct atcaaacttg ggacctgcgg 2941 ccagatatga aaaatcccgg cacgataatc ttcagtttca ccgcctcact gatcagtttg 3001 gatatgacaa taaccgaatc gggatatacg gtgaataatt tccagggagg cagcactcag 3061 ggcattaccg atatgatagg aaagaccctc tcgctggcgg atctcaaggc catgctgatc 3121 ctatccgccg tggacatttt ccccgacgaa gatgccttct gctatacgga gggatcctgc 3181 gagaagaact acgtgatgga gatgcactgc tatgcgtgtc tctccacctt ggcccagtcg 3241 cacaacttca gttggtcgcg atggaatctt ttggccggtt cccggacggc ggtccttctc 3301 gttcgcgagc tgatcgaggg caagaaggtg ccgtactact ccactctgtt ggtcacacca 3361 ctgaagacct cgataatcga ttgtacggag gtatcggcca gcttcaatgc cgttggcatt 3421 ccgggcatgg agtactatgc cgatctgtat cagctatcgc aggcccatgc gcagccgggg 3481 agcctggaga agcagaggac catgagtccc gtgctcaggg ataatgtggc caagattctg 3541 atggccattc gaccacttag cttgtgttga tagttaagta atcgaaatta tattaatcga 3601 tagata