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LOCUS XM_070218498 2286 bp mRNA linear INV 09-DEC-2024 homolog StfR-like (LOC138913784), mRNA. ACCESSION XM_070218498 VERSION XM_070218498.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 4% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2286 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2286 /gene="LOC138913784" /note="prophage side tail fiber protein homolog StfR-like; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:138913784" CDS 1..717 /gene="LOC138913784" /codon_start=1 /product="prophage side tail fiber protein homolog StfR-like" /protein_id="XP_070074599.1" /db_xref="GeneID:138913784" /translation="MPPPRPSELAAKSDDDADVAVAARPTPPAAATTTTTTARATTTS TSTTATPTTVTTTTTTYRSRNLLKATAKVKKKKKWKQISFVDDQQRLKQAATSAERKR STSSAPPALESHAPPRLGRFLRQKSSETASSAATSAAAGRRKSSAASIIAAAAAGAAG FQQQQQHNNHNNSSSCAATGSEEQNSSGTLTGSGIGGSSGGCSGNTSTSTWCGSINFL VYMVCSFCCCCYNFRNSPSR" ORIGIN 1 atgccgccgc cgcgaccttc tgaactggcg gccaaaagtg acgacgacgc cgacgtcgcc 61 gttgcagcgc gtccaacgcc gccggcagca gcaacaacaa caacaacaac agccagagct 121 acaacaacaa gcacttcaac aactgcaaca ccaacaactg taacaacaac cacaacaaca 181 tatagatcgc gaaatcttct gaaagccacc gccaaagtga agaagaagaa aaagtggaag 241 caaatctcct tcgtcgacga tcagcagcgc ctgaagcaag cagcgacgtc ggcagagcgc 301 aagcgttcta ccagcagcgc cccgcccgcc ctcgagagcc acgccccccc gcgccttgga 361 cgctttttgc gccagaagag cagcgaaaca gcgagcagcg ctgcaacgtc agcggcggcg 421 ggacgtcgca aatcatcggc ggcatcgatt atcgcagcag cggcagcggg cgctgctggc 481 ttccagcagc agcagcagca caacaaccac aacaacagca gcagctgcgc tgcgaccggc 541 agcgaggagc agaactcgag cggtacgctc accggcagcg gcatcggcgg cagcagcggc 601 ggctgcagcg gtaatacttc aacgtcgacg tggtgcggca gcatcaactt cctggtgtat 661 atggtgtgct ccttctgctg ctgttgctac aacttccgca attcgccatc taggtaagtc 721 gattatgtgc actatctaca ttgtaattaa tcgagcaact tcggtaagct tatttgcatc 781 ggcaattgaa aacaaagcag tggaagctaa acaatgagct tattttgcac attgcgtatt 841 cgccatgatg aacgggttaa tttgagatac tcgccattga ttttgggagc tcgtgcaagc 901 tataaacaat aagtgattat tgctcaaaga tgcggaataa tataagactg gttcttagtt 961 cctgcactta attgttggct tcccccacta tttgtgcgct ccatttgttt gctttaaatt 1021 tatattctat ttgttggggg ccggtctgta gttttttttc ttctttagct ggctctgtga 1081 taagcgcttt gctggctgat aagaatccaa agagtcggca cgctttgtag aatccaccga 1141 aagcccccca gaaaagcaaa taaattcgag gctattgtcg tttttacctt ttatcacatg 1201 tgataaatga atatggagaa gcagccaaga gattagcgaa cctgcagttg gtgcgattta 1261 gaattggaac aatttatata tatgtagcta tggtagaaat aataattatt tttttgtttt 1321 ttggtagttt tcttcgaata aaatgaacta acattttttt aaaaactgtt ttgtctttgt 1381 ttttaaagat aagttattta aaaatttctt ttaagtcaga aatatttaag gaaaatgaag 1441 aaataaaagt cgtgcctatt attttttcca cgactgtata tatatatata tattttaaaa 1501 aaatacaaat caataaatat aaaatcctta ctaaactaaa ctatttgaca gtcaattaat 1561 gtggaaaaat tgccattaaa ttgattgcac atttgacttg attgctgaaa ccagaaaatg 1621 gcttaattta ttaagctggc aaagtatgac acccaattta tggctgcata aatcacacat 1681 gtgtacttac atgtgtatgc agattttaca tgtgtctgaa tttgaattcc ccgaacaaca 1741 atttaaaagt ctccctcttt ttgcatttta tatatacaaa catatatgta tatatgcatg 1801 tgtacgtatt ttcgccggac ttttttgcac atcccaattt ttgttccggc acttttttga 1861 gtcattgtgc aagaagttaa aaaaagggaa aataatgaag aaaaaaagta acgacgacgc 1921 tatgtctgcc cgatctgctt gtaattggat ttccgctgtt agccgaaggg agagggcaat 1981 atggtcgcaa gagagagggc gccactgtgc gagcgagagg gcactagtca gcggcagctg 2041 tttgatgatg aatctcaagt cgctgtctca ttacaacttt caatttcaat tgcttctttt 2101 gcttctattc gccctctctt tttcgcatta ggctaagcat ctacgctggc gcttatttta 2161 ggctacactg caagaaaata atgttagcac aatcttgtac tttttaaaat taaatgtata 2221 acttttgaaa atagataaca tttcatattt tataaaagac aacaattctt caaggtcaat 2281 aaaaat