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LOCUS XM_070218493 2414 bp mRNA linear INV 09-DEC-2024 (LOC108058861), transcript variant X2, mRNA. ACCESSION XM_070218493 VERSION XM_070218493.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2414 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2414 /gene="LOC108058861" /note="uncharacterized LOC108058861; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108058861" CDS 448..1572 /gene="LOC108058861" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_070074594.1" /db_xref="GeneID:108058861" /translation="MFQALPRPSRSTLHCGAAAIVTVILMAWVRPLGVLFLGFLGYWI YWTRCSFRIVPTDELRGKINGWLQRIDDWRHSSPSMFCLASSGCLGTLAVLGHLFSGS TLVLAILVVSALVSTKYTFKLLKIEHKDFQWSEKLNYNNLEAEAEDEFLPDVNESNLF VLERASDVATISSPTDANDEKDDERSDDIPSELLIPDVIPEIDEQSTDEDDELAPLAA KKQHGENQQQQHEQLAEENEDMKFRKGHFKRDSSLSTTSSSSEESLSKGLQFPDHTSV DASGNTRLRQITAGPDPAGELMALAVKSQAQALLANSGKLLPSLVSGLVQWGSGGAAA ASSGDDATDASRDRKQQRMVTALDSSDESDFEILETDDFK" misc_feature <643..789 /gene="LOC108058861" /note="ADP-ribosylation factor-like protein 6-interacting protein 1, Reticulophagy regulator 3, and similar proteins; Region: Arl6IP1_RETR3-like; cl41772" /db_xref="CDD:425403" polyA_site 2414 /gene="LOC108058861" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gacgttttcg catctctaaa aggaatcgga tgtgtttttt atcattgcgt tgattgttgt 61 tgtggcgcga tcgaatttgt ttggaagtcg ggaaatcagc tttatcattt gaaaagtgtt 121 ttgatttagg acaccgtcag ctataacgaa aaccgcggat tttaacaaag agcacacaaa 181 ggaaaggaat aaagaacgga aggataagag cagagagtgc aaatctgtta ctgttactcg 241 gcccatgcgc acagctgatc cagaacctgg cctaacggta aaccgattgt ctcggacttg 301 aaaagcggaa atcgaaagcg aaacggaagt cgcctggaaa agcggagcgg aaaataaaac 361 tgcccgctaa ccgcgggagc cgagaaccga aattcaaagc cacacaggct ataacaaaga 421 gaataaagta gaccaagcaa attgaagatg ttccaagccc tgccccgtcc atcaaggtcc 481 acgctccact gtggagcggc agccatcgtc acagtcatcc tcatggcctg ggtccgacca 541 ctgggcgtgc tgttcctggg attcctgggc tattggatct actggacacg ctgtagcttc 601 cggattgtgc ccacggacga attgcgcggc aagataaacg gctggctgca gaggattgac 661 gactggcgcc acagcagtcc cagcatgttc tgcttggcca gcagcggctg cttgggcacc 721 cttgcggtgc tcggccacct cttctccggc tccacgctgg tcctggccat cctggttgtc 781 tcggcccttg tctccaccaa gtacaccttt aagctgctga agatcgagca caaggacttc 841 cagtggtcgg agaaactcaa ctacaacaac ttggaagccg aggcagagga cgagtttcta 901 ccggacgtga acgaatcaaa tctgttcgtg ctggagcggg caagcgatgt ggccacgatc 961 agttcaccca ccgatgcaaa tgacgagaag gatgacgagc gcagcgacga tataccgtcg 1021 gagctgctga ttccggatgt gatacccgag atcgacgagc agtctaccga cgaagacgat 1081 gagctggctc cactggcggc caagaagcag catggcgaaa accagcagca gcagcatgaa 1141 cagctagccg aggagaacga ggatatgaaa ttcaggaagg gtcacttcaa gcgcgattcg 1201 tccctgtcca ccacgtcctc gtcttcggag gaaagcctgt ccaaggggct gcagttcccc 1261 gatcacacct ccgtagacgc gagtggcaac actcggttgc gccagataac cgcaggaccc 1321 gatcccgccg gcgagcttat ggccctggcc gtgaaatccc aggctcaggc gcttttggcc 1381 aacagcggga agctcctgcc cagtcttgtc tccggtctgg tgcagtgggg atcaggtggc 1441 gctgccgcag ccagttccgg cgatgatgcg accgatgcaa gtcgggatcg caagcagcag 1501 cgcatggtca ccgccttgga ttcttcggat gagagtgact ttgagatact cgaaacggat 1561 gatttcaagt aaagattgga tcaaatcgga gatcgttccg atttgtcgta ttataaagct 1621 attatcttaa tatacatatg catacacaca cagtacacaa accaatcgac agacagaaca 1681 aggaaactca gacgacgcgg actgttggaa cggttatatt ttccctggtg gagatcagtt 1741 atatattttg ctatacacta gtgctctata tacatatata ctaaactaaa catacaaaac 1801 taccctaaaa ttaagccgaa agttttcgtt ttcgtttgat tgctatgtac atttttgttt 1861 atataacctt atgcttattc ctattttact atttgactct agtttgtatt agtcttgtta 1921 tgcctatcta ctgatcacaa acagaaacaa gaacgaccga cgcatgcaaa atgtacatat 1981 actacagata cacttatcta tatgtatggt ttatattgat gtcgctgtga gggcattaag 2041 ctacttaatc tgaatccaaa tcaaaagcct aaagcagcaa tttaaaaacc aaaaaatgac 2101 attaagaaaa caaacatgaa atatggttca gagatatcta taaaaaaatt cggcataaaa 2161 cgtgcacaaa tcataacaaa acaaaaatta taagaaattg aagacactcg ttttactggc 2221 gacttttgtc cctggctatc attgtacgtt gaagaacata actaaaacat taattcctgt 2281 gaacgaaatt ttttttgtat ttttattata atttgcgcta tgtattttaa gttgtaattt 2341 aatttgcgaa acaaaactaa atgtgatttt gtaaaaacaa aagaaactga aataaaaatc 2401 aaaaagacct cgaa