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LOCUS XM_070218482 1735 bp mRNA linear INV 09-DEC-2024 transcript variant X5, mRNA. ACCESSION XM_070218482 VERSION XM_070218482.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1735 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1735 /gene="sol" /note="small optic lobes; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055917" CDS 316..1605 /gene="sol" /codon_start=1 /product="calpain-D isoform X4" /protein_id="XP_070074583.1" /db_xref="GeneID:108055917" /translation="MGTISSVLQWSCTKCNTINPTESLKCFNCGTVRKVFPQQQQQQQ RRVTASWTADDALEQEQAEREKEKEQAERDREKDKDKEKGRAAVARSEYKHVYKSLLR GCLKRPQRNSQNLPANCVDCEDTRKYIKSSIELYRHFSNPALNRRWVCHACGTDNSSV TWHCLICDTVSYLAPIYKDAIAADRDCGQELAGSLGNRGELLAADPHPHPHPHPHHHH HYQLQQELEEQHHHQLHSQQHSHKRHLKGRSGSGSGAGSGQGSGQGSGAGSSAGSGLR RTQSLSTAIDKSASGRSCHICYANNQSKDIFNLPQVKPAPQLTGIPPVAACSNSRFAI ANDTFCRRKQNNNNKNQNHKVVRESGAKRKYNFTITTLSRSAAKDSIGGQGQMKPLRQ QPVNLNTQQQQQQQKSQLQQQQQQQQRKNQREPAAHA" misc_feature 331..417 /gene="sol" /note="Zn-finger in Ran binding protein and others; Region: zf-RanBP; pfam00641" /db_xref="CDD:395516" misc_feature 343..402 /gene="sol" /note="RanBP2-type Zn finger [structural motif]; Region: RanBP2-type Zn finger" /db_xref="CDD:275376" misc_feature <490..>588 /gene="sol" /note="Atrophin-1 family; Region: Atrophin-1; pfam03154" /db_xref="CDD:460830" misc_feature 745..834 /gene="sol" /note="Zn-finger in Ran binding protein and others; Region: zf-RanBP; pfam00641" /db_xref="CDD:395516" ORIGIN 1 cggtatttca tctccctatc gagatatcac caaaagccaa agaattaaag aaagccgatt 61 aaaaaggagc ccggcgtttc cgcggcgtgc aactgttttt ggtcctcgtt ttggtcccgg 121 gttctggtcc tccaaatcga tctccatctc cgcccggtcg ccacaacaac gcaccattca 181 gtaccacttc cagttgcaca ttctcagccg caaccacaat cacagcccac atcccacccc 241 ccgcccccca ttcactcccc cgccagccaa caacaacaac aacaacagta gcgattccag 301 cgattccccc gcgaaatggg caccatctca tccgtgctgc agtggtcgtg caccaagtgc 361 aacacgatca atccgacgga gtcgttaaag tgcttcaatt gcggcaccgt tcgcaaggtg 421 ttcccccaac agcaacaaca acaacagcga agggtcaccg cctcctggac agctgatgat 481 gcactggagc aggagcaggc ggagagggag aaggagaagg agcaggcaga gagggacagg 541 gagaaggata aggacaagga gaagggcagg gcggcggttg ccaggagcga gtacaagcat 601 gtgtacaagt cgctgctgcg cggatgcctg aagagaccgc agcggaacag ccagaacctg 661 cccgccaatt gcgtcgactg cgaggatacg cgcaagtaca tcaagagctc catcgagctc 721 taccgccact tctcgaatcc cgccctcaat cggcggtggg tgtgccacgc ctgcggcacc 781 gacaacagct cggtcacctg gcactgcctc atctgcgaca cggtcagcta tctggcgccc 841 atctacaagg acgccattgc agccgatcgc gattgcggcc aggagctggc cggcagtctg 901 ggcaatcgcg gcgagctgct ggcagcggat ccccatccgc atccccatcc gcatccacat 961 catcatcatc actaccaact gcaacaggag ctggaggagc agcaccatca tcagttacat 1021 tcccagcagc actcgcacaa gaggcacctt aaaggtagat ctggctcggg atcgggagcg 1081 ggatcgggtc agggatcggg tcagggatcg ggtgcaggtt cgagtgcagg atctggactg 1141 cggcgcaccc agagcctgag caccgccatc gacaagagcg cctcggggcg cagctgccac 1201 atctgctatg cgaacaacca gagcaaggac atcttcaatc tgccgcaggt caagccggcg 1261 ccccagctga cagggattcc ccccgtggcc gcctgcagca actcgcgatt cgccatcgcc 1321 aacgacacgt tttgccggcg caagcagaac aacaacaaca agaaccagaa ccacaaggtg 1381 gtgcgggaga gcggggccaa gcggaagtac aacttcacca ttacgacgct ctcgcgttcg 1441 gcggccaagg attcgattgg cggccagggc caaatgaagc cgctgcgcca gcagcccgtc 1501 aatctgaata cccagcagca gcagcagcag cagaagtcgc agctgcagca gcagcagcag 1561 cagcagcaga ggaagaacca gcgggagcca gcagcacacg catgatccgg gtagcagcag 1621 tcgcctgata atagccacat ccgcaacagc agcagcgacc acatcctcgg gagcggcgat 1681 agttgcagca ggcagccgca gcaagatgtg gacatgcatc aaatgttcct atgcc