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LOCUS XM_070218469 2529 bp mRNA linear INV 09-DEC-2024 4 (APC4), transcript variant X2, mRNA. ACCESSION XM_070218469 VERSION XM_070218469.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2529 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2529 /gene="APC4" /note="anaphase-promoting complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056150" CDS 96..2426 /gene="APC4" /codon_start=1 /product="anaphase-promoting complex subunit 4 isoform X2" /protein_id="XP_070074570.1" /db_xref="GeneID:108056150" /translation="MSQTSSMKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQR LNWQKIVTFPTPGEDVRVRSLSWQMDETLLAVGYSNGKVALLDAESETIISGLIYEDD IKKVYFSKAINAQENLGTYTCNAKDKHRRFLPKLQPLTNIDPCLKTLDQKSFPKGSPC FLVVIMRSGKVHLLLLGALQAGSIDLTQHILHPEQFDVYDVRLNGDFNAIYALLRDGQ ELKMLHFHNQVLQECMAPMLELATHCAHILETKNYINDTQQCLTEAWETVQLEMDNKL TKYANSQPYGLISAHFLELHVFGFATFEVEEFLTLSEKGFKKIANSVDLSLSNLQSLV FKQLNGSAINMFYFLNTIAGFGRMSHFFESLISPEVANEAMRACGAFVLKVHELQRTI DTLVYDMKLFHAWMIFTILRLSHQEIPDDLVLTEEENIAMADFLCAMEPELEDRSDDD EGEDDVEPLSEVELPQARSKFNLERVGQYLENAYLSQPHTRDPSQLWEEMVAENECLN DCRLFVPHDKQLSLVQQRDKMFNAIDAVFHKPTESISGSFKLSSAVICNDLPPMEPGE GLEDREIVTCSYYVNEAARSDMLACTISWQEAMILEVSRAGDGLVRCMRIQLEPGLFS SAHEDFYNLRFVDLQFYNESSLSILAQSTSAVSGMRPHSFFIQFSLSAARNQCTQHQM GPLVKLKEATVTHSIHDVVDGAAFKGLDGLCDMLAVSGSRKVATVLSDRKRKMTIFEM EIEEEEDDTEMSQASFLEISKESVLAGVVDSEKPDG" misc_feature 159..428 /gene="APC4" /note="Anaphase-promoting complex subunit 4 WD40 domain; Region: ANAPC4_WD40; pfam12894" /db_xref="CDD:403945" misc_feature 756..1343 /gene="APC4" /note="Anaphase-promoting complex, cyclosome, subunit 4; Region: ANAPC4; pfam12896" /db_xref="CDD:463744" polyA_site 2529 /gene="APC4" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accctcgata gacgccggca aagtgtaaac caaaaaatta aactttttta attcccattt 61 tttaatgtaa ataaaaggag gaaaagcttg aaaagatgag ccaaacgagc tccatgaagc 121 tgctgggcgc ccgcaacatg tcctgcattg tggagcgcat ggagtggaac aacaagatgg 181 acctgattgc ctacggaacg gaaaagggcg aggtggtcat ccagcggctc aactggcaga 241 agatcgtcac ctttcccacg cccggcgagg atgtgcgggt gcgctccctc agctggcaga 301 tggacgaaac gctcctggcc gtgggctaca gcaatggcaa ggtggctctg ctggacgccg 361 agagcgagac gatcatctcg ggcctcatct acgaggatga catcaagaag gtctacttca 421 gcaaggccat caatgcgcag gagaacttag gcacctacac ctgcaatgcg aaggacaagc 481 accgccggtt cctgcccaaa ctgcaaccgc tgaccaatat cgatccctgt ctgaaaaccc 541 tcgaccagaa gtcctttccc aagggttcgc cctgcttcct cgtggtcatc atgcgcagcg 601 gcaaggtgca tctactgctg ctcggcgccc tgcaggcggg cagcattgat ctcacccagc 661 acatcctgca tccggagcag ttcgatgtgt acgatgtgcg gctaaatggc gactttaatg 721 ccatctatgc cctgctgagg gacggccagg agctgaagat gctgcacttt cacaaccagg 781 tgctgcagga gtgcatggcg cccatgctgg agctggccac gcactgtgcg cacatcctgg 841 aaactaagaa ctacataaac gacacacagc aatgcctgac ggaggcctgg gagaccgtgc 901 agctggagat ggacaacaag ctgaccaagt acgccaattc ccagccctac ggcttgatct 961 cggcccattt tttggagctg cacgtctttg gattcgctac cttcgaggtg gaggagtttc 1021 taacgctgtc cgagaagggc ttcaagaaga tcgccaactc ggtggacttg agtctgagca 1081 atctgcagag cctggtgttc aagcagctca atggatccgc catcaacatg ttctatttcc 1141 tcaacacaat cgccggcttt ggtcgcatgt cgcatttctt cgagtccctc atctcacccg 1201 aggtggccaa tgaggcaatg cgcgcctgcg gagccttcgt gctcaaagta cacgaactgc 1261 agcgaacgat cgacactttg gtgtacgaca tgaagctctt tcacgcctgg atgatattca 1321 ctatactccg gctgtcgcat caggagattc ccgacgacct ggtgctcacc gaggaggaga 1381 atatagcaat ggccgacttt ctgtgcgcca tggaacccga gctggaggat cgcagcgatg 1441 atgatgaggg ggaagacgat gtggagccgc tttccgaggt ggaactaccc caggcacgca 1501 gcaaattcaa tctggagcga gtgggccagt atctggagaa tgcctacttg tcgcagccgc 1561 acacccggga tcccagccag ctgtgggagg agatggtggc ggagaatgag tgcctaaatg 1621 actgccggct gttcgtcccg cacgacaagc aactctcgct cgtccagcag cgcgacaaga 1681 tgttcaatgc catcgatgca gtgtttcaca agccaacgga gagcattagc ggaagtttta 1741 agctttcctc cgccgtgatt tgcaacgatc tgccgcccat ggaaccgggc gaggggctgg 1801 aggatcggga gatagtgacc tgcagctatt acgtgaacga ggccgcgcgc agcgacatgt 1861 tggcctgcac gattagctgg caggaggcca tgatcctgga ggtcagtcgg gcgggcgatg 1921 gcctggtgcg ctgcatgcgc attcaactgg agccgggatt gttctcctcg gcccatgagg 1981 atttctacaa tctgcgcttc gtcgatttgc agttctacaa cgaatcctcg ctctcgattc 2041 tcgcccagtc cacgagcgcc gtttctggca tgcgtccgca cagcttcttt atacaattct 2101 cgctgagtgc ggcgcgcaat cagtgcaccc agcatcaaat gggaccgctg gtcaagctga 2161 aggaggccac cgtgacgcac agcatccacg atgtggtcga tggggccgcc tttaagggtt 2221 tggatggcct ctgcgacatg ctggccgtct cgggcagccg gaaagtggcc acagtgctgt 2281 ccgatcgcaa gcgcaaaatg accattttcg aaatggagat cgaggaggag gaggacgaca 2341 cggagatgtc gcaggcctcg ttcctcgaga tcagcaagga gtcggtgctg gccggggtcg 2401 tggattcgga gaagccagat gggtagttct ttagtcttta taaattcaaa tggaatgata 2461 attataattt gataatttaa gatcgtggaa cttgaattat tcaaataatt acatatttcg 2521 ttggtggaa