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LOCUS XM_070218464 4178 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_070218464 VERSION XM_070218464.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4178 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4178 /gene="Klp3A" /note="kinesin-like protein 3A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055808" CDS 387..3998 /gene="Klp3A" /codon_start=1 /product="chromosome-associated kinesin KIF4 isoform X2" /protein_id="XP_070074565.1" /db_xref="GeneID:108055808" /translation="MSGEDPSSVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVN RTEAYTYNNVFDIGDTQKDIFESCVQGKVQKLLHGYNVTILAYGQTGSGKTYTMGTAF NGVLDDHAGVIPRAVHDIFLAIEDMREEFRFAVTCSFVELYQEQFFDLFSSQKREKAT VDIREVKNRVVMPGLTELEVKSAQEVTDHLMRGSAGRAVAATAMNETSSRSHAIFTLT LVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEGVNINKGLLALGNVINAL GSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLSTLRYADRALQ IKNKPVVNLDPHAAEVNMLKDIIQKLRVELLAGGKMSSSITSAVGAAGLGSLSGEESL AGSMANAAENQRLKEQVRSLLDRNRKLQQELHHSLVDLTEKEMRAHIAEQAHDKLRVH VVQLKKQLNLKEGDAELREISQLVDLVDDELQRTQEELESQGQETRQQLSSRSQSERD GDSGSCSSSGGDEAHSEEFTNKQLNFAGELRNINRQLDLKQELHERIIRNFSKLESED EDAKLRACNQKIDGLEAERRDLMDQLRNIKNKDTSAKIAEERRKRLQLLEQEISELRR KLVTQANMLKMREKEREKIQNLSGEIRAMKESKVKLIRAMRGESEKFRQWKMVREKEL TQLKSKDRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDALERQASAQAQRQK YAKDHGSSSNSHSKSDSWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKT NDPAEAKEQARLLANLEEELEMRNAQIADLQQKICPTDLDTRIRSLAEGVQSIGESRA VSKQLLKTLVQQRRQQAASLNEQRTALDEQRTQLLEAQQQGEAASRRLRSVETEHQEQ MLALQRAYEEKVAVLIRTANQRSAEIQPPAEQEKQRQQVLEEILSSREALQQELDALK ARTKSKIKAVKAEPQNLDESCQLVEVNETIELSDLSDDPDWLPETSKAKKLQANSSRN ATLAENVTTTGNASIQSLNSTAATEDGKRGKGCKCRTKCNTKRCGCFVANHGCCDGCV CKSNCLNPANAKEQAPQNGEGDGGGGQQPASTDGNGDSAEGEEVDDDEEHQATKENPV NFSTPQTPGKAKRPLMEPPPAAPSTPLGDLNGLEDLNGPKLARMSGLAFATPKRKFF" misc_feature 405..1394 /gene="Klp3A" /note="Kinesin motor domain, KIF4-like subfamily; Region: KISc_KIF4; cd01372" /db_xref="CDD:276823" misc_feature order(432..434,648..650,657..659,663..674,1101..1103) /gene="Klp3A" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:276823" misc_feature order(1248..1250,1257..1259,1266..1268) /gene="Klp3A" /note="microtubule interaction site [polypeptide binding]; other site" /db_xref="CDD:276823" misc_feature <1593..>3308 /gene="Klp3A" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 3555..3674 /gene="Klp3A" /note="DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; Region: MSL2_CXC; cl25608" /db_xref="CDD:452415" polyA_site 4178 /gene="Klp3A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttcagttgtg ttcgaggttg gaacagacaa attacaacgt tttattttaa ttccattaaa 61 ttttacctaa aataagtagc cataaactag ccacaacgac acacccgctg gccaatcgac 121 ctatcgaagg gcggacggac caatcgataa ctccgccatt tttgaaaata ctggcagcaa 181 caatgtattc gtttgctggc gtcgcattcc tttagcttaa attgctgggc cccaaaaatt 241 gccgaaagta acgtaaccgc tctagatagc tctagataaa accaaaattg cctgttgtcc 301 ggggccaccg cggtgcctag ttgctagttc ctagttcttc cctgtgttcc ttggctgaaa 361 aaaaacgatt aatccccccc tcgcagatgt ccggcgagga tcccagttcc gtggccgtgg 421 ccctgcgcgt gcgccccctg gtgcagtcgg agttggaccg cggctgccgg atcgccgtgg 481 agcgttcggc ggacggagct ccccaggtga cggtcaaccg gacggaggcg tacacgtaca 541 acaatgtctt cgacatcggg gacacccaga aggacatctt cgagagctgt gtgcagggca 601 aggtgcagaa gctgctgcac ggctacaatg tcaccatcct cgcgtatgga caaacgggct 661 ccggcaagac ctacaccatg ggcacggcct tcaatggtgt gctggacgat catgccggtg 721 tcattccacg tgccgttcat gatatattcc tggccatcga ggatatgcgc gaggaattcc 781 gctttgcggt cacctgctcc ttcgtggagc tctaccagga gcagttcttt gaccttttct 841 ccagccagaa gcgcgagaag gccaccgtgg acattaggga ggtgaagaac cgggttgtca 901 tgccgggtct caccgaactg gaggttaaat ccgcccagga ggtcaccgat cacctgatgc 961 gcggctccgc cggacgagct gtggccgcca cggccatgaa cgagacctcc tcgagatcgc 1021 atgccatctt cacgctcacc ctggtggcca ccaagctgga cggcaagcaa tccgtcacca 1081 catcccgctt caatctggtg gatctggctg gctcggaacg ctgctccaag accctggcca 1141 gcggggatcg cttcaaggag ggcgtgaaca tcaacaaggg cctgctggcc ctgggcaatg 1201 tgatcaatgc cttgggatct ggccaggccg ccggctacat accctaccgg cagtccaagc 1261 tgacgcgcct gctgcaggac tccctgggcg gcaactccat caccctgatg atcgcctgcg 1321 tcagcccggc cgactacaat gtggccgaga cgctgagcac tctgcgctac gcggatcgcg 1381 ccctgcagat caagaacaag ccggtggtca atctcgatcc gcatgcggcg gaggtcaaca 1441 tgctgaagga cattatccag aagctgcgtg tggaactcct ggcgggcggc aagatgagca 1501 gctccatcac cagcgccgtt ggagctgctg gcttgggctc tctttccggc gaggagtcgc 1561 tggccgggtc catggccaat gcggccgaga atcagcggct caaggagcaa gtgcgcagcc 1621 tgctggacag gaacaggaag ctgcagcagg agctgcatca ctccctggtc gatctcaccg 1681 agaaggagat gcgcgcgcac attgccgagc aggctcacga caaactgcgc gtgcatgtgg 1741 tgcagctgaa gaagcaactg aatctgaagg aaggagacgc tgaactgcgc gaaatctcac 1801 agctggtgga cctggtggac gatgagctgc agcgcacgca ggaggagctg gagtcgcagg 1861 gccaggagac ccgccagcag ctcagcagtc gctcccaatc cgagagggac ggcgactcag 1921 gtagctgttc gtcgagcggc ggcgatgaag cccactccga ggagtttacc aacaagcagc 1981 tgaacttcgc cggcgagctg cgcaacatca atcgccagct ggacctcaag caggagctgc 2041 acgagcgcat cattcgcaac ttcagcaagc tggagtccga ggacgaggac gccaagctgc 2101 gggcgtgcaa ccagaagatc gatggcctgg aggctgagcg acgcgacctc atggaccagc 2161 tgcgcaacat taaaaacaag gacacctcgg ccaagatagc cgaggagcga cgcaagcggc 2221 tgcagctgct cgagcaggag atctccgagc tgcgccgcaa gctggtcacc caggccaaca 2281 tgctgaagat gcgcgagaag gagcgcgaga agatccagaa tctgagcggc gagatccggg 2341 ccatgaagga gtccaaggtg aagctcatac gcgccatgcg cggcgagtcg gagaagttcc 2401 gccagtggaa gatggtgcgc gaaaaggagc tcacccagct gaagagcaag gaccgcaaga 2461 tgcagtcgga gattgtccgc cagcagacgt tgcactccaa gcaaaggcag gtgctgaagc 2521 gcaagtgcga ggaggccttg gcggccaaca agcggctgaa ggatgccctc gagcggcagg 2581 cctcggcgca ggcgcagcgc cagaagtacg ccaaggatca tggctcctcc tctaactcgc 2641 actcgaagtc cgatagctgg gtggaccgtg aactggagat catactctcg ctcatcgatg 2701 cggagcacag tttggagcag ctcatggagg accgggcggt gatcaacaat cactatcacc 2761 tgctgcagca ggagaagacc aacgatccgg ccgaggccaa ggagcaggct cgcctgctgg 2821 ccaatctcga ggaggagctg gagatgcgca atgcccagat cgccgacctg cagcagaaga 2881 tctgccccac cgacctggac actcggattc gctccctggc cgagggtgtc cagagcattg 2941 gcgaatcgcg cgctgttagc aagcagctgc tcaagactct ggtgcagcag cgacgccagc 3001 aggcggccag cctgaatgaa cagcgcacgg cgttggatga gcagcgcacg cagctcctgg 3061 aggcccagca gcagggcgag gcggccagca ggcgccttcg ttcggtggag accgagcatc 3121 aggagcaaat gctcgccttg caacgagcct acgaggagaa ggtggccgtt ttgatacgga 3181 cagccaacca gagatcggct gagattcaac cgccggcgga gcaggagaag cagcgccagc 3241 aggtgctcga ggagatcctc agcagccgcg aggcactgca gcaggagctg gacgcactga 3301 aggcccgcac gaagtcgaag atcaaggctg tgaaggccga gccacagaat ctcgatgaaa 3361 gttgccagct ggtggaggtc aacgagacca tcgaactgag cgatctcagc gacgatcccg 3421 actggttgcc ggaaacatcg aaggccaaga aacttcaggc gaactccagc cgcaatgcga 3481 ctttagccga gaatgtgacc actaccggca atgcttccat ccagtccctg aactccacag 3541 ccgccacgga ggatggcaag cggggcaagg gatgcaagtg ccggaccaaa tgcaacacca 3601 agcgatgcgg ctgctttgtg gccaaccacg gttgctgcga cggctgcgtt tgcaagagca 3661 actgcctcaa tcccgcgaac gccaaggagc aggcgccgca aaacggcgag ggtgacggtg 3721 gtggtggtca gcaaccagcg agcacggatg gcaatgggga ttcggcggag ggcgaggagg 3781 tcgacgacga tgaggagcac caggccacca aggagaatcc cgtgaacttc tccacgccgc 3841 aaacgcccgg caaggcgaag cgaccgctga tggaaccacc gccagcggca ccatccacgc 3901 cgctgggcga cctgaacgga ctggaggacc tcaatggacc caagttagca agaatgtcgg 3961 gattggcctt tgccacgccg aagaggaaat tcttttgaag cttcaaggaa atcgggaaac 4021 ggaaacggaa gtggaagtgg aaaggaaaga gaggagcagc gaagtcagct tgtttccaag 4081 agccagattg aacttctttc aatatgttta tgttatcgtt tatcatccaa gactgtatga 4141 atcatccact ttttataata tagttccaat agctcatt