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LOCUS XM_070218463 2682 bp mRNA linear INV 09-DEC-2024 furrowed (fw), transcript variant X4, mRNA. ACCESSION XM_070218463 VERSION XM_070218463.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2682 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2682 /gene="fw" /note="CUB and Sushi multiple domains furrowed; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108069740" CDS 66..2159 /gene="fw" /codon_start=1 /product="sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X2" /protein_id="XP_070074564.1" /db_xref="GeneID:108069740" /translation="MSEERSSFGVVATYSCHENYTLIGNENRTCAVEGWSGKQPECLV DWCPDPQPITGGNVRFSDKRAGSTATYVCETGYVLVGEAIISCGLGGEWSSKTPSCRF VDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQTELYCTRDGKWSGEAPVC ELVTCETPPVPSGSFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAPYC EYIDCGQILPIPYGSHKYVTNSTYVGSEVVFSCSQSHKLSGVLKRQCLESAVWSDTSP KCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNAAQTYKIGALAKYRCERG YKMVGEALATCTDSGQWSGSIPECVYVECGAPESIGNGKAVLATNATYYGAAVLYECN VNFKLNGVSRRLCTEHGNWSHEAPECVEVVCDAPNISENLIVEAGPRAVGSVATFKCS KGRIMMGNDTRVCQKNGKWAGKSPTCRPVDCGRPLAIENGRVIVVNDSTLYGGSAEYH CIPNYNRIGQYLRKCTEDGAWSGKQPRCELSTAEGHETSELGTGVGIGATVIVALLVI FGLIFLYRNKARPVKNTENVQAAETKDERNAAVMSYSTLEANNRMHMDNNPSATFNTF QGGAGGRNASGGNPPDATSNGERLNNNRSENIYDQIPNEQFYDAPYEMRTNDEVYEPE PVASNVITINGISVR" misc_feature <69..191 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature <153..719 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature 732..902 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(762..764,819..821) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 1011..1673 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" polyA_site 2682 /gene="fw" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gataagtccc ttaataagat gtggactgcg gcagtctacc agagctaaag tttgggtcca 61 tccacatgtc cgaggagcgg tcgagcttcg gcgtggtggc cacatacagt tgccacgaga 121 actacacgct catcgggaac gagaaccgga catgtgccgt cgagggatgg agtgggaagc 181 agccggagtg cctagtggac tggtgtccgg atccccagcc gattaccgga gggaatgtgc 241 ggttcagtga caaaagggcc ggatccacgg ccacatatgt ttgcgaaacg ggatatgtgc 301 tggttggcga ggcgatcatc tcgtgcggac tgggcggtga gtggtcgagc aagacgccgt 361 cgtgcagatt cgtcgattgt ggagctccgg ctcgaccaaa tcgaggcatc gctatcctgc 421 tgaacggaac gaccaccgtg aattcggtgg tcaagtacga gtgcgacgag gatcactggc 481 tggacgggca gacggagctc tattgcaccc gggatggcaa gtggtcgggc gaggcgccgg 541 tctgcgaact ggtcacctgc gaaacgccac cagtcccatc cggttccttc gtgatcggct 601 acgactacaa tgtccactcg aagatccagt acaactgcga tcccggacac ataatgcacg 661 gaactccggt cctcgagtgc ctggacagtg gggaatggag tgccgatgca ccctattgcg 721 aatacatcga ttgtggccag atcctgccca ttccctatgg cagccacaag tacgtcacga 781 atagcaccta tgtgggatcg gaggtggttt tcagctgttc ccagtcccac aaactgagtg 841 gtgtccttaa gcgtcagtgc ctggaatcgg cggtttggag cgatacgtcg cccaagtgcg 901 aagagattcg ctgtcccgaa ccgaagctgg ctgcccacag tctgctctcc gtcactggga 961 acgatcgcat gtacggacgc acccttatcc gcacctccga atcctcacag aacgctgctc 1021 agacctacaa aattggcgct ctggcaaagt accgatgcga acggggttac aagatggtgg 1081 gagaggctct ggccacctgc actgatagtg ggcagtggag cggttccata ccggaatgcg 1141 tctatgtgga gtgcggggcc ccggagagca tcggcaacgg caaggcggtc ctggccacga 1201 acgccaccta ctatggagcc gccgttctct acgagtgcaa tgtgaacttc aagctgaatg 1261 gggtatcccg ccgcctgtgc acggagcacg gcaactggag ccacgaggcc cccgagtgcg 1321 tggaggtggt ctgcgatgcg cccaacatca gtgagaacct aatcgtcgag gccggtcccc 1381 gggccgtggg ctctgtggcc accttcaagt gctccaaggg caggatcatg atgggcaatg 1441 acacacgcgt ctgccagaag aacggcaaat gggccggtaa aagccccacc tgcaggcctg 1501 tcgactgcgg acgccccctg gccattgaga acggacgagt gatcgtggtc aacgactcga 1561 ccttgtacgg cgggtccgcc gagtaccact gcatccccaa ctacaaccgg atcgggcagt 1621 atctgcgcaa gtgcaccgag gacggggcct ggagcggaaa gcagccccgc tgcgaactgt 1681 ccaccgccga gggccacgag acctccgagc tggggacggg cgtgggcatc ggagccactg 1741 tgatcgtcgc cctgctggtc atcttcggcc tgatcttcct gtatcgcaac aaggcgaggc 1801 ccgtgaagaa cacggagaac gtccaggcgg cggagacgaa ggacgagcga aacgccgccg 1861 tgatgtcgta ttccacgctg gaggcgaaca accgtatgca catggacaac aatccatcgg 1921 cgacgttcaa cacgtttcag ggcggagccg gcggacgaaa cgcttccggc ggcaatcctc 1981 cagatgcaac cagcaacggg gaaagactga acaacaatcg gtcggaaaac atttacgatc 2041 aaataccaaa cgagcagttc tacgatgctc cctacgagat gcgaaccaat gacgaggtct 2101 acgaaccgga accggtggcc agtaatgtca tcaccatcaa cggcatttcc gtcagataga 2161 tagatacgga tattgggata tttttcttac caaaatccaa aggaggcacc ggatagcagc 2221 attaattacc gaacgtttaa cgttcagttt tgtgttaata actgtacata ttaattgttt 2281 aagggaggtt ttgagttact cgtagttcgc ctaaatctaa actttggtca ccccaagcac 2341 ttgtactgta gttgccccgt cgtataaatt aggtctatcc atatataccg cataatctaa 2401 ctttatactt acatatacca tatctaaatg gatgtgccta ctctgcagcc catgtactga 2461 aatcgatttg tcgagtagga atttgaattg gaatttttgg accaagagct ctatattctg 2521 tattctctat attcatactc gtatttgttt gtgttgttta aattatttta actatgtagt 2581 gaggaatgaa caatttttgt tatgcaatgt gtaagaactc gccaatgtgt gtttgtaaaa 2641 agcgttaatt ttacgaacaa ttaaacgatt gtggttaact aa