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LOCUS XM_070218462 4515 bp mRNA linear INV 09-DEC-2024 furrowed (fw), transcript variant X3, mRNA. ACCESSION XM_070218462 VERSION XM_070218462.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4515 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4515 /gene="fw" /note="CUB and Sushi multiple domains furrowed; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108069740" CDS 477..3992 /gene="fw" /codon_start=1 /product="P-selectin isoform X1" /protein_id="XP_070074563.1" /db_xref="GeneID:108069740" /translation="MFCCNLLFTISTSTSESQSRSHRNRTVVMTSPNAMPLIMLLLLA LCTAGNCQICGPPAVPLNAKVRTVTVDSQIAEAHYECDAGYELFGSASVKCDVRTGWE RDLPFCGVNVAYRKPVNQSSYTRSGPASYANDGKPGNKNPDGQECSETQKEPSPWWRV DLLTPQAVRVVRITTRGCCGHQPLQDLEIRVGNSSADLQRNPLCAWYPGTLDEGVVKT FTCARPLVGQYVAIQLVGVEGSLSLCEVETFTNDEFSMDRCLSPKIGVDTVVTTFSKT CYDFHITKGESFEKAQAICKQTGGDLVHDFRGATSQYILSELERRKTELKPQLVWIGA QKEPGITSRTWKWVNGDVVQKPTWGKDQPNNYNGEQNCVVLDGGRNWLWNDVGCNLDY LHFICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLIGQTERECRLDGTW SGSSPTCKYVDCGSLPELKFGSIHMSEERSSFGVVATYSCHENYTLIGNENRTCAVEG WSGKQPECLVDWCPDPQPITGGNVRFSDKRAGSTATYVCETGYVLVGEAIISCGLGGE WSSKTPSCRFVDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQTELYCTRD GKWSGEAPVCELVTCETPPVPSGSFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDS GEWSADAPYCEYIDCGQILPIPYGSHKYVTNSTYVGSEVVFSCSQSHKLSGVLKRQCL ESAVWSDTSPKCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNAAQTYKIG ALAKYRCERGYKMVGEALATCTDSGQWSGSIPECVYVECGAPESIGNGKAVLATNATY YGAAVLYECNVNFKLNGVSRRLCTEHGNWSHEAPECVEVVCDAPNISENLIVEAGPRA VGSVATFKCSKGRIMMGNDTRVCQKNGKWAGKSPTCRPVDCGRPLAIENGRVIVVNDS TLYGGSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQPRCELSTAEGHETSELGTGVGIG ATVIVALLVIFGLIFLYRNKARPVKNTENVQAAETKDERNAAVMSYSTLEANNRMHMD NNPSATFNTFQGGAGGRNASGGNPPDATSNGERLNNNRSENIYDQIPNEQFYDAPYEM RTNDEVYEPEPVASNVITINGISVR" misc_feature 636..800 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(666..668,720..722) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 801..1247 /gene="fw" /note="eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain; Region: FTP; smart00607" /db_xref="CDD:128870" misc_feature 1305..1673 /gene="fw" /note="C-type lectin (CTL)/C-type lectin-like (CTLD) domain; Region: CLECT; cd00037" /db_xref="CDD:153057" misc_feature order(1581..1583,1596..1598,1602..1604,1620..1622, 1626..1637,1647..1655) /gene="fw" /note="ligand binding surface [chemical binding]; other site" /db_xref="CDD:153057" misc_feature <1686..2198 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature <1986..2552 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature 2565..2735 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(2595..2597,2652..2654) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 2844..3506 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" polyA_site 4515 /gene="fw" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actgaatccg agccgcgctc ttttattttt ttcctgtgtg gcttgctgtt tcatacattt 61 ttgttttagt ggtttttatt ttatatgtgc gaactggtca gagattgata tgcagtgtgt 121 gcagtaatat atacgaacat ataaaacatc ataattagcc tgtggaaatt cagtgcgaat 181 gcaaagtgaa accttagtga tcgcagcacg atcgctcacg ctattcatat attatgtgtg 241 tatgtttttt gaaataaaaa tataaataat tgacaagtgt atgcataaat taatcgatgg 301 tgatgccaca acaaaaacaa catcgtatat aaggccccag ctaatcggca gccaacggca 361 ttataatcgc acacaaacac aacagcacca acaacttcaa cttcagcatc tcggcaactt 421 ttgcagcatc ggaaatacac ggcagcagga aaattaacag ctgccaacag caaacaatgt 481 tttgctgcaa cttattgttc acaatatcca catccacatc tgaatctcag tcccgatccc 541 atcgtaaccg cactgtggtc atgacttctc caaatgcaat gcccctcatt atgctgctgc 601 tgctggcact gtgcacagct ggaaattgcc aaatttgcgg tcccccagcg gtgccgctga 661 atgccaaggt gcgaaccgtc accgtcgact cccaaatcgc ggaggcgcac tacgagtgcg 721 atgctggcta cgagctgttt ggctccgcgt cggtcaagtg tgacgtccgg acgggctggg 781 agcgggatct gcccttctgc ggggtgaacg ttgcctaccg gaagccggtt aaccagagct 841 cctacacccg gagcggtcct gcgagctatg cgaacgacgg caagccgggt aacaagaatc 901 ccgatggtca ggagtgctcc gagacgcaaa aggagccgtc cccttggtgg cgcgttgacc 961 tcctgacccc gcaggcggtg cgcgtggtgc ggatcaccac aaggggctgt tgcggccacc 1021 agccgctgca ggatctggaa atccgggtgg gcaatagcag tgcggatctg cagcggaatc 1081 cgctgtgcgc ctggtatccc ggcaccctcg acgagggcgt cgtgaagacc ttcacctgtg 1141 cccgccccct ggtcggccaa tatgtggcca tccaactggt gggcgtcgag ggcagcttga 1201 gtctctgcga ggtggagacc ttcaccaacg acgagttctc catggatcgc tgcctgagtc 1261 ccaaaatcgg agtggacacc gtggtgacga cattctcgaa aacctgctat gactttcata 1321 tcacaaaagg agaaagcttc gaaaaggcgc aggccatttg caagcagaca ggtggcgact 1381 tggtacacga ctttcggggc gccaccagcc aatacatctt gtccgagctg gagcgccgga 1441 agaccgaact gaagccgcag ctcgtctgga ttggcgccca aaaggagccg ggcatcacct 1501 ctcgcacctg gaagtgggtt aacggggatg tggttcaaaa gccgacctgg ggtaaggatc 1561 aaccaaataa ctacaatggc gagcagaact gtgtcgtctt ggatggaggt cgaaattggc 1621 tgtggaatga cgttggctgc aacctggact acttgcactt catctgtcag cactctccat 1681 tgtcttgcgg ctcgccggat gcccagcaaa ataccactgt catgggcaaa aagttcactc 1741 tgggcgagaa gatccaatac acgtgtccca agggccattc gctgatcggt cagacggaac 1801 gggagtgccg actcgatggc acttggagcg gctcttcgcc gacctgcaaa tatgtggact 1861 gcggcagtct accagagcta aagtttgggt ccatccacat gtccgaggag cggtcgagct 1921 tcggcgtggt ggccacatac agttgccacg agaactacac gctcatcggg aacgagaacc 1981 ggacatgtgc cgtcgaggga tggagtggga agcagccgga gtgcctagtg gactggtgtc 2041 cggatcccca gccgattacc ggagggaatg tgcggttcag tgacaaaagg gccggatcca 2101 cggccacata tgtttgcgaa acgggatatg tgctggttgg cgaggcgatc atctcgtgcg 2161 gactgggcgg tgagtggtcg agcaagacgc cgtcgtgcag attcgtcgat tgtggagctc 2221 cggctcgacc aaatcgaggc atcgctatcc tgctgaacgg aacgaccacc gtgaattcgg 2281 tggtcaagta cgagtgcgac gaggatcact ggctggacgg gcagacggag ctctattgca 2341 cccgggatgg caagtggtcg ggcgaggcgc cggtctgcga actggtcacc tgcgaaacgc 2401 caccagtccc atccggttcc ttcgtgatcg gctacgacta caatgtccac tcgaagatcc 2461 agtacaactg cgatcccgga cacataatgc acggaactcc ggtcctcgag tgcctggaca 2521 gtggggaatg gagtgccgat gcaccctatt gcgaatacat cgattgtggc cagatcctgc 2581 ccattcccta tggcagccac aagtacgtca cgaatagcac ctatgtggga tcggaggtgg 2641 ttttcagctg ttcccagtcc cacaaactga gtggtgtcct taagcgtcag tgcctggaat 2701 cggcggtttg gagcgatacg tcgcccaagt gcgaagagat tcgctgtccc gaaccgaagc 2761 tggctgccca cagtctgctc tccgtcactg ggaacgatcg catgtacgga cgcaccctta 2821 tccgcacctc cgaatcctca cagaacgctg ctcagaccta caaaattggc gctctggcaa 2881 agtaccgatg cgaacggggt tacaagatgg tgggagaggc tctggccacc tgcactgata 2941 gtgggcagtg gagcggttcc ataccggaat gcgtctatgt ggagtgcggg gccccggaga 3001 gcatcggcaa cggcaaggcg gtcctggcca cgaacgccac ctactatgga gccgccgttc 3061 tctacgagtg caatgtgaac ttcaagctga atggggtatc ccgccgcctg tgcacggagc 3121 acggcaactg gagccacgag gcccccgagt gcgtggaggt ggtctgcgat gcgcccaaca 3181 tcagtgagaa cctaatcgtc gaggccggtc cccgggccgt gggctctgtg gccaccttca 3241 agtgctccaa gggcaggatc atgatgggca atgacacacg cgtctgccag aagaacggca 3301 aatgggccgg taaaagcccc acctgcaggc ctgtcgactg cggacgcccc ctggccattg 3361 agaacggacg agtgatcgtg gtcaacgact cgaccttgta cggcgggtcc gccgagtacc 3421 actgcatccc caactacaac cggatcgggc agtatctgcg caagtgcacc gaggacgggg 3481 cctggagcgg aaagcagccc cgctgcgaac tgtccaccgc cgagggccac gagacctccg 3541 agctggggac gggcgtgggc atcggagcca ctgtgatcgt cgccctgctg gtcatcttcg 3601 gcctgatctt cctgtatcgc aacaaggcga ggcccgtgaa gaacacggag aacgtccagg 3661 cggcggagac gaaggacgag cgaaacgccg ccgtgatgtc gtattccacg ctggaggcga 3721 acaaccgtat gcacatggac aacaatccat cggcgacgtt caacacgttt cagggcggag 3781 ccggcggacg aaacgcttcc ggcggcaatc ctccagatgc aaccagcaac ggggaaagac 3841 tgaacaacaa tcggtcggaa aacatttacg atcaaatacc aaacgagcag ttctacgatg 3901 ctccctacga gatgcgaacc aatgacgagg tctacgaacc ggaaccggtg gccagtaatg 3961 tcatcaccat caacggcatt tccgtcagat agatagatac ggatattggg atatttttct 4021 taccaaaatc caaaggaggc accggatagc agcattaatt accgaacgtt taacgttcag 4081 ttttgtgtta ataactgtac atattaattg tttaagggag gttttgagtt actcgtagtt 4141 cgcctaaatc taaactttgg tcaccccaag cacttgtact gtagttgccc cgtcgtataa 4201 attaggtcta tccatatata ccgcataatc taactttata cttacatata ccatatctaa 4261 atggatgtgc ctactctgca gcccatgtac tgaaatcgat ttgtcgagta ggaatttgaa 4321 ttggaatttt tggaccaaga gctctatatt ctgtattctc tatattcata ctcgtatttg 4381 tttgtgttgt ttaaattatt ttaactatgt agtgaggaat gaacaatttt tgttatgcaa 4441 tgtgtaagaa ctcgccaatg tgtgtttgta aaaagcgtta attttacgaa caattaaacg 4501 attgtggtta actaa