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LOCUS XM_070218461 4638 bp mRNA linear INV 09-DEC-2024 furrowed (fw), transcript variant X2, mRNA. ACCESSION XM_070218461 VERSION XM_070218461.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4638 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4638 /gene="fw" /note="CUB and Sushi multiple domains furrowed; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108069740" CDS 600..4115 /gene="fw" /codon_start=1 /product="P-selectin isoform X1" /protein_id="XP_070074562.1" /db_xref="GeneID:108069740" /translation="MFCCNLLFTISTSTSESQSRSHRNRTVVMTSPNAMPLIMLLLLA LCTAGNCQICGPPAVPLNAKVRTVTVDSQIAEAHYECDAGYELFGSASVKCDVRTGWE RDLPFCGVNVAYRKPVNQSSYTRSGPASYANDGKPGNKNPDGQECSETQKEPSPWWRV DLLTPQAVRVVRITTRGCCGHQPLQDLEIRVGNSSADLQRNPLCAWYPGTLDEGVVKT FTCARPLVGQYVAIQLVGVEGSLSLCEVETFTNDEFSMDRCLSPKIGVDTVVTTFSKT CYDFHITKGESFEKAQAICKQTGGDLVHDFRGATSQYILSELERRKTELKPQLVWIGA QKEPGITSRTWKWVNGDVVQKPTWGKDQPNNYNGEQNCVVLDGGRNWLWNDVGCNLDY LHFICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLIGQTERECRLDGTW SGSSPTCKYVDCGSLPELKFGSIHMSEERSSFGVVATYSCHENYTLIGNENRTCAVEG WSGKQPECLVDWCPDPQPITGGNVRFSDKRAGSTATYVCETGYVLVGEAIISCGLGGE WSSKTPSCRFVDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQTELYCTRD GKWSGEAPVCELVTCETPPVPSGSFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDS GEWSADAPYCEYIDCGQILPIPYGSHKYVTNSTYVGSEVVFSCSQSHKLSGVLKRQCL ESAVWSDTSPKCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNAAQTYKIG ALAKYRCERGYKMVGEALATCTDSGQWSGSIPECVYVECGAPESIGNGKAVLATNATY YGAAVLYECNVNFKLNGVSRRLCTEHGNWSHEAPECVEVVCDAPNISENLIVEAGPRA VGSVATFKCSKGRIMMGNDTRVCQKNGKWAGKSPTCRPVDCGRPLAIENGRVIVVNDS TLYGGSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQPRCELSTAEGHETSELGTGVGIG ATVIVALLVIFGLIFLYRNKARPVKNTENVQAAETKDERNAAVMSYSTLEANNRMHMD NNPSATFNTFQGGAGGRNASGGNPPDATSNGERLNNNRSENIYDQIPNEQFYDAPYEM RTNDEVYEPEPVASNVITINGISVR" misc_feature 759..923 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(789..791,843..845) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 924..1370 /gene="fw" /note="eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain; Region: FTP; smart00607" /db_xref="CDD:128870" misc_feature 1428..1796 /gene="fw" /note="C-type lectin (CTL)/C-type lectin-like (CTLD) domain; Region: CLECT; cd00037" /db_xref="CDD:153057" misc_feature order(1704..1706,1719..1721,1725..1727,1743..1745, 1749..1760,1770..1778) /gene="fw" /note="ligand binding surface [chemical binding]; other site" /db_xref="CDD:153057" misc_feature <1809..2321 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature <2109..2675 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature 2688..2858 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(2718..2720,2775..2777) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 2967..3629 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" polyA_site 4638 /gene="fw" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggaagccatt taaagtttac ttttactttt tcaatcgaag caatcgaatg gaactgaatc 61 gaatcgagtg gtcggtagat agatatatat gtataaagac tatatatatg gtttgggaac 121 ttaggaaagc ggttggaatc ggttgggttg gacaggtgag ggcggagtca aagtcaacgg 181 ccgccaagct gtgattttca cgattattca tgattacaat gtattatcca gtatgcagtg 241 tgtgcagtaa tatatacgaa catataaaac atcataatta gcctgtggaa attcagtgcg 301 aatgcaaagt gaaaccttag tgatcgcagc acgatcgctc acgctattca tatattatgt 361 gtgtatgttt tttgaaataa aaatataaat aattgacaag tgtatgcata aattaatcga 421 tggtgatgcc acaacaaaaa caacatcgta tataaggccc cagctaatcg gcagccaacg 481 gcattataat cgcacacaaa cacaacagca ccaacaactt caacttcagc atctcggcaa 541 cttttgcagc atcggaaata cacggcagca ggaaaattaa cagctgccaa cagcaaacaa 601 tgttttgctg caacttattg ttcacaatat ccacatccac atctgaatct cagtcccgat 661 cccatcgtaa ccgcactgtg gtcatgactt ctccaaatgc aatgcccctc attatgctgc 721 tgctgctggc actgtgcaca gctggaaatt gccaaatttg cggtccccca gcggtgccgc 781 tgaatgccaa ggtgcgaacc gtcaccgtcg actcccaaat cgcggaggcg cactacgagt 841 gcgatgctgg ctacgagctg tttggctccg cgtcggtcaa gtgtgacgtc cggacgggct 901 gggagcggga tctgcccttc tgcggggtga acgttgccta ccggaagccg gttaaccaga 961 gctcctacac ccggagcggt cctgcgagct atgcgaacga cggcaagccg ggtaacaaga 1021 atcccgatgg tcaggagtgc tccgagacgc aaaaggagcc gtccccttgg tggcgcgttg 1081 acctcctgac cccgcaggcg gtgcgcgtgg tgcggatcac cacaaggggc tgttgcggcc 1141 accagccgct gcaggatctg gaaatccggg tgggcaatag cagtgcggat ctgcagcgga 1201 atccgctgtg cgcctggtat cccggcaccc tcgacgaggg cgtcgtgaag accttcacct 1261 gtgcccgccc cctggtcggc caatatgtgg ccatccaact ggtgggcgtc gagggcagct 1321 tgagtctctg cgaggtggag accttcacca acgacgagtt ctccatggat cgctgcctga 1381 gtcccaaaat cggagtggac accgtggtga cgacattctc gaaaacctgc tatgactttc 1441 atatcacaaa aggagaaagc ttcgaaaagg cgcaggccat ttgcaagcag acaggtggcg 1501 acttggtaca cgactttcgg ggcgccacca gccaatacat cttgtccgag ctggagcgcc 1561 ggaagaccga actgaagccg cagctcgtct ggattggcgc ccaaaaggag ccgggcatca 1621 cctctcgcac ctggaagtgg gttaacgggg atgtggttca aaagccgacc tggggtaagg 1681 atcaaccaaa taactacaat ggcgagcaga actgtgtcgt cttggatgga ggtcgaaatt 1741 ggctgtggaa tgacgttggc tgcaacctgg actacttgca cttcatctgt cagcactctc 1801 cattgtcttg cggctcgccg gatgcccagc aaaataccac tgtcatgggc aaaaagttca 1861 ctctgggcga gaagatccaa tacacgtgtc ccaagggcca ttcgctgatc ggtcagacgg 1921 aacgggagtg ccgactcgat ggcacttgga gcggctcttc gccgacctgc aaatatgtgg 1981 actgcggcag tctaccagag ctaaagtttg ggtccatcca catgtccgag gagcggtcga 2041 gcttcggcgt ggtggccaca tacagttgcc acgagaacta cacgctcatc gggaacgaga 2101 accggacatg tgccgtcgag ggatggagtg ggaagcagcc ggagtgccta gtggactggt 2161 gtccggatcc ccagccgatt accggaggga atgtgcggtt cagtgacaaa agggccggat 2221 ccacggccac atatgtttgc gaaacgggat atgtgctggt tggcgaggcg atcatctcgt 2281 gcggactggg cggtgagtgg tcgagcaaga cgccgtcgtg cagattcgtc gattgtggag 2341 ctccggctcg accaaatcga ggcatcgcta tcctgctgaa cggaacgacc accgtgaatt 2401 cggtggtcaa gtacgagtgc gacgaggatc actggctgga cgggcagacg gagctctatt 2461 gcacccggga tggcaagtgg tcgggcgagg cgccggtctg cgaactggtc acctgcgaaa 2521 cgccaccagt cccatccggt tccttcgtga tcggctacga ctacaatgtc cactcgaaga 2581 tccagtacaa ctgcgatccc ggacacataa tgcacggaac tccggtcctc gagtgcctgg 2641 acagtgggga atggagtgcc gatgcaccct attgcgaata catcgattgt ggccagatcc 2701 tgcccattcc ctatggcagc cacaagtacg tcacgaatag cacctatgtg ggatcggagg 2761 tggttttcag ctgttcccag tcccacaaac tgagtggtgt ccttaagcgt cagtgcctgg 2821 aatcggcggt ttggagcgat acgtcgccca agtgcgaaga gattcgctgt cccgaaccga 2881 agctggctgc ccacagtctg ctctccgtca ctgggaacga tcgcatgtac ggacgcaccc 2941 ttatccgcac ctccgaatcc tcacagaacg ctgctcagac ctacaaaatt ggcgctctgg 3001 caaagtaccg atgcgaacgg ggttacaaga tggtgggaga ggctctggcc acctgcactg 3061 atagtgggca gtggagcggt tccataccgg aatgcgtcta tgtggagtgc ggggccccgg 3121 agagcatcgg caacggcaag gcggtcctgg ccacgaacgc cacctactat ggagccgccg 3181 ttctctacga gtgcaatgtg aacttcaagc tgaatggggt atcccgccgc ctgtgcacgg 3241 agcacggcaa ctggagccac gaggcccccg agtgcgtgga ggtggtctgc gatgcgccca 3301 acatcagtga gaacctaatc gtcgaggccg gtccccgggc cgtgggctct gtggccacct 3361 tcaagtgctc caagggcagg atcatgatgg gcaatgacac acgcgtctgc cagaagaacg 3421 gcaaatgggc cggtaaaagc cccacctgca ggcctgtcga ctgcggacgc cccctggcca 3481 ttgagaacgg acgagtgatc gtggtcaacg actcgacctt gtacggcggg tccgccgagt 3541 accactgcat ccccaactac aaccggatcg ggcagtatct gcgcaagtgc accgaggacg 3601 gggcctggag cggaaagcag ccccgctgcg aactgtccac cgccgagggc cacgagacct 3661 ccgagctggg gacgggcgtg ggcatcggag ccactgtgat cgtcgccctg ctggtcatct 3721 tcggcctgat cttcctgtat cgcaacaagg cgaggcccgt gaagaacacg gagaacgtcc 3781 aggcggcgga gacgaaggac gagcgaaacg ccgccgtgat gtcgtattcc acgctggagg 3841 cgaacaaccg tatgcacatg gacaacaatc catcggcgac gttcaacacg tttcagggcg 3901 gagccggcgg acgaaacgct tccggcggca atcctccaga tgcaaccagc aacggggaaa 3961 gactgaacaa caatcggtcg gaaaacattt acgatcaaat accaaacgag cagttctacg 4021 atgctcccta cgagatgcga accaatgacg aggtctacga accggaaccg gtggccagta 4081 atgtcatcac catcaacggc atttccgtca gatagataga tacggatatt gggatatttt 4141 tcttaccaaa atccaaagga ggcaccggat agcagcatta attaccgaac gtttaacgtt 4201 cagttttgtg ttaataactg tacatattaa ttgtttaagg gaggttttga gttactcgta 4261 gttcgcctaa atctaaactt tggtcacccc aagcacttgt actgtagttg ccccgtcgta 4321 taaattaggt ctatccatat ataccgcata atctaacttt atacttacat ataccatatc 4381 taaatggatg tgcctactct gcagcccatg tactgaaatc gatttgtcga gtaggaattt 4441 gaattggaat ttttggacca agagctctat attctgtatt ctctatattc atactcgtat 4501 ttgtttgtgt tgtttaaatt attttaacta tgtagtgagg aatgaacaat ttttgttatg 4561 caatgtgtaa gaactcgcca atgtgtgttt gtaaaaagcg ttaattttac gaacaattaa 4621 acgattgtgg ttaactaa