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LOCUS XM_070218460 4584 bp mRNA linear INV 09-DEC-2024 furrowed (fw), transcript variant X1, mRNA. ACCESSION XM_070218460 VERSION XM_070218460.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4584 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4584 /gene="fw" /note="CUB and Sushi multiple domains furrowed; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108069740" CDS 546..4061 /gene="fw" /codon_start=1 /product="P-selectin isoform X1" /protein_id="XP_070074561.1" /db_xref="GeneID:108069740" /translation="MFCCNLLFTISTSTSESQSRSHRNRTVVMTSPNAMPLIMLLLLA LCTAGNCQICGPPAVPLNAKVRTVTVDSQIAEAHYECDAGYELFGSASVKCDVRTGWE RDLPFCGVNVAYRKPVNQSSYTRSGPASYANDGKPGNKNPDGQECSETQKEPSPWWRV DLLTPQAVRVVRITTRGCCGHQPLQDLEIRVGNSSADLQRNPLCAWYPGTLDEGVVKT FTCARPLVGQYVAIQLVGVEGSLSLCEVETFTNDEFSMDRCLSPKIGVDTVVTTFSKT CYDFHITKGESFEKAQAICKQTGGDLVHDFRGATSQYILSELERRKTELKPQLVWIGA QKEPGITSRTWKWVNGDVVQKPTWGKDQPNNYNGEQNCVVLDGGRNWLWNDVGCNLDY LHFICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLIGQTERECRLDGTW SGSSPTCKYVDCGSLPELKFGSIHMSEERSSFGVVATYSCHENYTLIGNENRTCAVEG WSGKQPECLVDWCPDPQPITGGNVRFSDKRAGSTATYVCETGYVLVGEAIISCGLGGE WSSKTPSCRFVDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQTELYCTRD GKWSGEAPVCELVTCETPPVPSGSFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDS GEWSADAPYCEYIDCGQILPIPYGSHKYVTNSTYVGSEVVFSCSQSHKLSGVLKRQCL ESAVWSDTSPKCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNAAQTYKIG ALAKYRCERGYKMVGEALATCTDSGQWSGSIPECVYVECGAPESIGNGKAVLATNATY YGAAVLYECNVNFKLNGVSRRLCTEHGNWSHEAPECVEVVCDAPNISENLIVEAGPRA VGSVATFKCSKGRIMMGNDTRVCQKNGKWAGKSPTCRPVDCGRPLAIENGRVIVVNDS TLYGGSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQPRCELSTAEGHETSELGTGVGIG ATVIVALLVIFGLIFLYRNKARPVKNTENVQAAETKDERNAAVMSYSTLEANNRMHMD NNPSATFNTFQGGAGGRNASGGNPPDATSNGERLNNNRSENIYDQIPNEQFYDAPYEM RTNDEVYEPEPVASNVITINGISVR" misc_feature 705..869 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(735..737,789..791) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 870..1316 /gene="fw" /note="eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain; Region: FTP; smart00607" /db_xref="CDD:128870" misc_feature 1374..1742 /gene="fw" /note="C-type lectin (CTL)/C-type lectin-like (CTLD) domain; Region: CLECT; cd00037" /db_xref="CDD:153057" misc_feature order(1650..1652,1665..1667,1671..1673,1689..1691, 1695..1706,1716..1724) /gene="fw" /note="ligand binding surface [chemical binding]; other site" /db_xref="CDD:153057" misc_feature <1755..2267 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature <2055..2621 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" misc_feature 2634..2804 /gene="fw" /note="Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system; Region: CCP; cd00033" /db_xref="CDD:153056" misc_feature order(2664..2666,2721..2723) /gene="fw" /note="receptor-ligand interactions [active]" /db_xref="CDD:153056" misc_feature 2913..3575 /gene="fw" /note="secreted complement-binding protein; Provisional; Region: PHA02927" /db_xref="CDD:222943" polyA_site 4584 /gene="fw" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcgaacttct gtgggacatt aaaaccagtt ataagtcaac tttcattcca agcagacgtg 61 ctgggagttt cggatcggaa agcggcgggt ttttgtttcg ccgttgcagt agcagcagcg 121 tttactcgtg caaatgcagc caggtcgcct aaacgagaaa taagttcacg ttcatagtat 181 gcagtgtgtg cagtaatata tacgaacata taaaacatca taattagcct gtggaaattc 241 agtgcgaatg caaagtgaaa ccttagtgat cgcagcacga tcgctcacgc tattcatata 301 ttatgtgtgt atgttttttg aaataaaaat ataaataatt gacaagtgta tgcataaatt 361 aatcgatggt gatgccacaa caaaaacaac atcgtatata aggccccagc taatcggcag 421 ccaacggcat tataatcgca cacaaacaca acagcaccaa caacttcaac ttcagcatct 481 cggcaacttt tgcagcatcg gaaatacacg gcagcaggaa aattaacagc tgccaacagc 541 aaacaatgtt ttgctgcaac ttattgttca caatatccac atccacatct gaatctcagt 601 cccgatccca tcgtaaccgc actgtggtca tgacttctcc aaatgcaatg cccctcatta 661 tgctgctgct gctggcactg tgcacagctg gaaattgcca aatttgcggt cccccagcgg 721 tgccgctgaa tgccaaggtg cgaaccgtca ccgtcgactc ccaaatcgcg gaggcgcact 781 acgagtgcga tgctggctac gagctgtttg gctccgcgtc ggtcaagtgt gacgtccgga 841 cgggctggga gcgggatctg cccttctgcg gggtgaacgt tgcctaccgg aagccggtta 901 accagagctc ctacacccgg agcggtcctg cgagctatgc gaacgacggc aagccgggta 961 acaagaatcc cgatggtcag gagtgctccg agacgcaaaa ggagccgtcc ccttggtggc 1021 gcgttgacct cctgaccccg caggcggtgc gcgtggtgcg gatcaccaca aggggctgtt 1081 gcggccacca gccgctgcag gatctggaaa tccgggtggg caatagcagt gcggatctgc 1141 agcggaatcc gctgtgcgcc tggtatcccg gcaccctcga cgagggcgtc gtgaagacct 1201 tcacctgtgc ccgccccctg gtcggccaat atgtggccat ccaactggtg ggcgtcgagg 1261 gcagcttgag tctctgcgag gtggagacct tcaccaacga cgagttctcc atggatcgct 1321 gcctgagtcc caaaatcgga gtggacaccg tggtgacgac attctcgaaa acctgctatg 1381 actttcatat cacaaaagga gaaagcttcg aaaaggcgca ggccatttgc aagcagacag 1441 gtggcgactt ggtacacgac tttcggggcg ccaccagcca atacatcttg tccgagctgg 1501 agcgccggaa gaccgaactg aagccgcagc tcgtctggat tggcgcccaa aaggagccgg 1561 gcatcacctc tcgcacctgg aagtgggtta acggggatgt ggttcaaaag ccgacctggg 1621 gtaaggatca accaaataac tacaatggcg agcagaactg tgtcgtcttg gatggaggtc 1681 gaaattggct gtggaatgac gttggctgca acctggacta cttgcacttc atctgtcagc 1741 actctccatt gtcttgcggc tcgccggatg cccagcaaaa taccactgtc atgggcaaaa 1801 agttcactct gggcgagaag atccaataca cgtgtcccaa gggccattcg ctgatcggtc 1861 agacggaacg ggagtgccga ctcgatggca cttggagcgg ctcttcgccg acctgcaaat 1921 atgtggactg cggcagtcta ccagagctaa agtttgggtc catccacatg tccgaggagc 1981 ggtcgagctt cggcgtggtg gccacataca gttgccacga gaactacacg ctcatcggga 2041 acgagaaccg gacatgtgcc gtcgagggat ggagtgggaa gcagccggag tgcctagtgg 2101 actggtgtcc ggatccccag ccgattaccg gagggaatgt gcggttcagt gacaaaaggg 2161 ccggatccac ggccacatat gtttgcgaaa cgggatatgt gctggttggc gaggcgatca 2221 tctcgtgcgg actgggcggt gagtggtcga gcaagacgcc gtcgtgcaga ttcgtcgatt 2281 gtggagctcc ggctcgacca aatcgaggca tcgctatcct gctgaacgga acgaccaccg 2341 tgaattcggt ggtcaagtac gagtgcgacg aggatcactg gctggacggg cagacggagc 2401 tctattgcac ccgggatggc aagtggtcgg gcgaggcgcc ggtctgcgaa ctggtcacct 2461 gcgaaacgcc accagtccca tccggttcct tcgtgatcgg ctacgactac aatgtccact 2521 cgaagatcca gtacaactgc gatcccggac acataatgca cggaactccg gtcctcgagt 2581 gcctggacag tggggaatgg agtgccgatg caccctattg cgaatacatc gattgtggcc 2641 agatcctgcc cattccctat ggcagccaca agtacgtcac gaatagcacc tatgtgggat 2701 cggaggtggt tttcagctgt tcccagtccc acaaactgag tggtgtcctt aagcgtcagt 2761 gcctggaatc ggcggtttgg agcgatacgt cgcccaagtg cgaagagatt cgctgtcccg 2821 aaccgaagct ggctgcccac agtctgctct ccgtcactgg gaacgatcgc atgtacggac 2881 gcacccttat ccgcacctcc gaatcctcac agaacgctgc tcagacctac aaaattggcg 2941 ctctggcaaa gtaccgatgc gaacggggtt acaagatggt gggagaggct ctggccacct 3001 gcactgatag tgggcagtgg agcggttcca taccggaatg cgtctatgtg gagtgcgggg 3061 ccccggagag catcggcaac ggcaaggcgg tcctggccac gaacgccacc tactatggag 3121 ccgccgttct ctacgagtgc aatgtgaact tcaagctgaa tggggtatcc cgccgcctgt 3181 gcacggagca cggcaactgg agccacgagg cccccgagtg cgtggaggtg gtctgcgatg 3241 cgcccaacat cagtgagaac ctaatcgtcg aggccggtcc ccgggccgtg ggctctgtgg 3301 ccaccttcaa gtgctccaag ggcaggatca tgatgggcaa tgacacacgc gtctgccaga 3361 agaacggcaa atgggccggt aaaagcccca cctgcaggcc tgtcgactgc ggacgccccc 3421 tggccattga gaacggacga gtgatcgtgg tcaacgactc gaccttgtac ggcgggtccg 3481 ccgagtacca ctgcatcccc aactacaacc ggatcgggca gtatctgcgc aagtgcaccg 3541 aggacggggc ctggagcgga aagcagcccc gctgcgaact gtccaccgcc gagggccacg 3601 agacctccga gctggggacg ggcgtgggca tcggagccac tgtgatcgtc gccctgctgg 3661 tcatcttcgg cctgatcttc ctgtatcgca acaaggcgag gcccgtgaag aacacggaga 3721 acgtccaggc ggcggagacg aaggacgagc gaaacgccgc cgtgatgtcg tattccacgc 3781 tggaggcgaa caaccgtatg cacatggaca acaatccatc ggcgacgttc aacacgtttc 3841 agggcggagc cggcggacga aacgcttccg gcggcaatcc tccagatgca accagcaacg 3901 gggaaagact gaacaacaat cggtcggaaa acatttacga tcaaatacca aacgagcagt 3961 tctacgatgc tccctacgag atgcgaacca atgacgaggt ctacgaaccg gaaccggtgg 4021 ccagtaatgt catcaccatc aacggcattt ccgtcagata gatagatacg gatattggga 4081 tatttttctt accaaaatcc aaaggaggca ccggatagca gcattaatta ccgaacgttt 4141 aacgttcagt tttgtgttaa taactgtaca tattaattgt ttaagggagg ttttgagtta 4201 ctcgtagttc gcctaaatct aaactttggt caccccaagc acttgtactg tagttgcccc 4261 gtcgtataaa ttaggtctat ccatatatac cgcataatct aactttatac ttacatatac 4321 catatctaaa tggatgtgcc tactctgcag cccatgtact gaaatcgatt tgtcgagtag 4381 gaatttgaat tggaattttt ggaccaagag ctctatattc tgtattctct atattcatac 4441 tcgtatttgt ttgtgttgtt taaattattt taactatgta gtgaggaatg aacaattttt 4501 gttatgcaat gtgtaagaac tcgccaatgt gtgtttgtaa aaagcgttaa ttttacgaac 4561 aattaaacga ttgtggttaa ctaa