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LOCUS XM_070218415 5189 bp mRNA linear INV 09-DEC-2024 (LOC108063202), transcript variant X2, mRNA. ACCESSION XM_070218415 VERSION XM_070218415.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5189 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5189 /gene="LOC108063202" /note="uncharacterized LOC108063202; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063202" CDS 18..5153 /gene="LOC108063202" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070074516.1" /db_xref="GeneID:108063202" /translation="MRSRGKTGPNGSVDCNTRSPRNIQMPRCPSRGADLVSTPEHLRP GFRGRTHRYDPSDFGLTGNEEWRHPRMFRDMTYETDAAAMETFRQAQPRRQPYETGIN LSNLPEECLADMSAPGFDLSLPSQMSDLRGEQLDDVSAPNLCDASNVSKTTSHVDNVY GEILDRFRSIRERINRANQLHGSEDPCYQQTTRRRIYTHRDPSGHITSHVVETTVSNT SSLDCTPAGEAGEPGRRLNFSLPNRSEQLMDESMPPYLECPEVVSSQDILDNETMPAF ESTARSQNMSLRSCLENETMPSFANISGVSRRQRTMPSECLDDVSQPSFARSRSSRSG RLSRSRRQSPRRQLQNLWDTSARNATTNECLEDISMPALEGVSNVSRSRGQRSRIQNI SSRRECLDDMTMPSFGGVSNLSTNQSRRQLQRSMSTQNINDTSEPMYASFSRGPMTNE CLEEVTMPSLVETSSRRPRSVGMPNECLEDMTMPSFGGVSRASRSRSLDRQHNNKSMP TRMTNECLDDMTMPSFGGVSGSSRRQMTIPSEVSSRGTSRRQRTVPSAFANSTKYGDT LPNECLEDVSMPSFGGVSGASRRKGSRRKQMTLPSQNIGDISAPSFASSGRGNTTNEC LEDISMPSFGGVSTNSRSRSRRGQKTSRRRSVTKECLDDMTMPSMGGVSVSVPSRRPM TLPSECLDDVSAPSFGRSLSRGDASRRQQQIPCASSTRCPPTNECLEDVTMPSFGHIS AASVRRQLTMPSECLEDMSGVSGPSRRRQTTGLPNECLDDVSMPTFGNISGISAYGKS RSVERSKQNLSRSQAANECLEDVTMPSFGGVSGVSRRKSISRHQRSVPPVSTNNECLE DVTMPSYEGASRASRVRSPRQRAMTSECLDDETMPSFGDVSQPSGRRTPRRQTQNISG PKFDTNECIEDISMPSYAENSRASRAKSSSRLQRSRQGAMTNECLDEVTMPSFGQASS RGPLTSECLEEISMPSYRENSRSFQRRCPTPKQSSRQECLDDVTMPSFGSSRRGLTTN ECLEDISMPAYGEPTGSSRGRSQMHSFRQGTMTNECLNDMTMPSYATSYRGPVTNECL EDISMPSYRSSRGKSPRRRSRQRLDDMTMPSFGMNADECLEDMSMPSYGGNSGLSRGM QRSMTMECLEDMTMPPYGGDSESSRGRSPRFEAMTNECLDDMTMPSHEDSGSVRGRTP KQIQIFQGAMTNECLDNMTMPSFGTSSRHRDTNECLADISMPSYGRNTISFPGRSPAT PRQRSRQEMMTNECLDDMTMPSYGEVFGLSRRQMSLPSERLNDVSEPSFARSTSEATS RRQRNSSRSPRPPPPQNSVTNECLEDMTMPTFGDISGSSRRGQVGMNSTRLEDISMPS GLSNRSQCTEDNASGGRRLEDASAPSRMTSRRYPQLTNECLEDVSMPPDESFGRNDSK PIARRPADISYPSEMLANESAPSYHSRRDEADKSADCSCSSPQQSSRGRSTGRLEDVT MPTFDDVSYQPRRHQLTMPCENLDDQTQPDFFNSTALPSSTRAEGKHQGKSQKNLADE SAPSILKDSSKGPSEVVKEVTVQSSTTSVTRVFNSSAETNANNSGQPMIEDLSMPQFE STGTSQAHQDSSLHGFQSMDNYRPFDELIYSQNSVGNQTQPQTPQPVRSANRSRSVRR TPSTSTNRAGTPSSATGIPGQPCDMITTNYPYGKPHCFSRKPC" polyA_site 5189 /gene="LOC108063202" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gacattatac ggataggatg aggagcagag ggaaaaccgg tccgaatggg tctgtggatt 61 gcaacacgag aagccccaga aatatccaga tgccgcgctg tccctctcga ggtgccgatt 121 tggttagcac tcccgagcat ctgcgaccgg gatttcgtgg acggacccat cgatacgatc 181 ctagcgattt cgggctgacg ggaaatgagg aatggcggca tccacggatg ttcagggata 241 tgacctacga gacagatgct gcggccatgg aaaccttccg ccaggctcaa ccacgtcgtc 301 agccctacga aacggggata aacctgagca atttgccgga ggagtgcctg gcggatatgt 361 cggcgcctgg cttcgatctc agcctgccat cgcagatgtc cgatttgcgg ggcgagcaac 421 tcgacgatgt atcggccccc aacttgtgcg atgcctcaaa tgtgtcgaag accaccagcc 481 acgtggacaa tgtgtatggc gagattctgg atcgctttag gagcatcagg gaacgtatta 541 atcgggccaa ccagctgcac ggatcggagg atccctgcta tcagcagacc acgcgacgaa 601 ggatctacac ccatcgcgat cccagtggtc acatcaccag ccacgtggtc gagacgactg 661 tctcgaatac ttcctcgctg gattgcacgc ccgccggtga ggctggtgaa ccgggacgac 721 ggctcaactt ctccttgcca aaccgatcgg agcagctaat ggatgagtca atgcccccgt 781 atctcgaatg cccggaggtg gtgtcctctc aggatattct ggataacgag acaatgcccg 841 ctttcgaatc cacagcgagg agtcagaata tgagtcttcg ttcctgtctg gagaacgaga 901 caatgccgtc gtttgcaaat atctctggag tgtcacgaag acagcggaca atgcccagcg 961 aatgcctaga cgatgtgagc cagccctcgt tcgcaaggag tagatcgagt agatcgggta 1021 ggctgagcag atctcgcaga cagagtccca gaaggcagct tcagaacctt tgggacacat 1081 cagccaggaa cgcgactacc aatgaatgcc tggaggacat ttcaatgccc gcccttgagg 1141 gcgtctcgaa tgtttccagg agcagaggtc agagatccag gatccagaat atatcttcaa 1201 ggcgcgaatg cttggatgac atgaccatgc cctcgtttgg tggagtatcc aacttgtcga 1261 cgaaccaaag tcgccgccaa ctgcaaagat cgatgtcaac gcaaaacatt aacgatactt 1321 ccgagcccat gtatgcgagt ttttcaagag gacccatgac taatgaatgc ctagaggaag 1381 tcaccatgcc atcactcgtt gaaacatcgt ctagacgacc gcgatccgtg ggaatgccca 1441 acgaatgtct ggaggatatg acaatgccct catttggtgg cgtttcgaga gcctcgagaa 1501 gcagaagtct ggatcgtcag cacaacaaca aatccatgcc aacgcgaatg acgaacgagt 1561 gtttggatga tatgaccatg ccgtcgtttg gtggcgtttc aggctcctcc cgaaggcaaa 1621 tgaccattcc gagtgaggtg agttcccgag gaacgagtcg aaggcagagg actgtgcctt 1681 ctgcgttcgc caactccacc aaatacgggg acactctacc gaatgagtgc ctggaggatg 1741 tgtcgatgcc atcttttggc ggagtttcgg gggcgtcgcg gaggaaggga tcccgacgaa 1801 agcagatgac gctaccctcg caaaatatag gtgatatttc ggctccctcg ttcgcaagct 1861 cgggcagggg caatacgacc aatgaatgct tggaggacat atcgatgcct tcgtttggcg 1921 gagtgtccac caattccagg agcagaagtc gaagaggcca aaagacttca agacgtcgtt 1981 cggtgaccaa agagtgtctg gatgacatga caatgccctc gatgggtgga gtatctgtat 2041 ctgttccatc gcgaagacca atgaccctgc ccagtgagtg cctggacgat gtgagtgccc 2101 cgtcctttgg aagaagcctg tcgcgaggtg acgccagtag aaggcagcag cagatcccat 2161 gtgccagctc caccagatgt ccgccgacga acgagtgttt ggaggacgtg acgatgccat 2221 catttggtca tatctccgcg gcctccgtcc gccgacagtt gacgatgccc agtgagtgtc 2281 tggaggacat gagtggggtc tctggtccct ccagaagacg acagaccact ggcttaccca 2341 acgagtgcct cgatgacgtg agcatgccca ccttcggcaa catctccgga atatctgcat 2401 atgggaaaag tagatcggtt gaacgatcta agcagaactt gagcagaagt caggctgcca 2461 atgagtgctt ggaggatgta acaatgcctt cctttggtgg agtatcaggt gtttccagga 2521 ggaaaagtat ctcacgacat cagagatccg tgccaccagt gagtactaat aatgaatgtc 2581 tagaggatgt gacaatgcct tcgtatgaag gagcatcgcg agcatccaga gttagaagtc 2641 cacggcaaag agcgatgaca agcgaatgtc tggatgacga gacaatgcca tccttcggag 2701 atgtttcgca gccctcgggt cgaaggactc ccagaagaca gacccagaat attagcggac 2761 cgaaattcga taccaatgaa tgtatcgagg acatttcgat gccttcgtat gctgaaaatt 2821 cacgagcctc gcgggcaaag agctcttcga ggttacaaag gtcgcgacaa ggagcgatga 2881 ccaacgaatg tctggatgag gtgacaatgc catcgtttgg tcaggcctca agtcgaggtc 2941 cactgacaag cgaatgtctc gaggaaattt caatgccttc gtacagggag aattcaagat 3001 cgtttcagcg aagatgcccc actccaaagc aaagctcaag acaagagtgc ttggatgatg 3061 tgaccatgcc atcatttgga agctcaagac gcggactgac caccaatgaa tgcctcgagg 3121 acatttccat gccagcgtat ggagaaccca ccggatcgtc caggggaaga agtcaaatgc 3181 atagcttcag acaaggaacg atgaccaatg agtgcttgaa tgacatgacc atgccatcat 3241 atgccacttc gtaccgagga cctgttacta acgagtgcct cgaggacatt tcaatgcctt 3301 catacaggtc gtcgagggga aaaagtccaa ggcgaagatc cagacagcgt ttggatgaca 3361 tgacgatgcc atcatttggt atgaatgccg atgaatgcct agaggacatg tcaatgcctt 3421 cgtatggtgg aaattccgga ttgtccaggg gaatgcaaag atccatgacg atggaatgct 3481 tggaggatat gacgatgcca ccctatggtg gcgattcgga atcatccaga ggaagaagcc 3541 ccagatttga agcgatgacc aatgaatgct tggatgacat gaccatgccg agccatgagg 3601 attcgggatc tgttcgaggc agaactccga agcaaatcca aatattccag ggagcaatga 3661 ccaatgaatg cttggataac atgaccatgc catcgtttgg aacttccagc cgccatcgcg 3721 atacaaacga atgcctcgcg gacatctcga tgccttcgta tggaagaaat accatctcct 3781 tcccgggcag aagccccgcc accccaaggc aaagatccag acaggaaatg atgacaaacg 3841 agtgcttgga tgacatgacc atgccatcgt atggcgaagt atttggttta tcccgccgcc 3901 agatgagtct gccaagtgag cgattgaacg acgtcagtga accctccttc gcaaggagca 3961 cttccgaggc caccagtcgg aggcagagaa actccagcag aagccccagg ccgccaccgc 4021 cgcaaaattc ggtgacgaat gagtgcctgg aggatatgac aatgccaaca ttcggcgaca 4081 tctctgggtc atcgcgacgt ggccaagtcg gcatgaacag cactcgcctg gaggacatca 4141 gcatgccctc gggcctatcg aatcgcagcc agtgcaccga ggataatgcg agtggaggac 4201 gtcgcctcga ggatgcgagt gctcccagtc gaatgacctc aagacgctat ccccagttga 4261 caaacgagtg tttggaggat gtttccatgc cgccggatga atcatttggc aggaacgatt 4321 cgaaaccaat agcgcgacgt ccggcagaca tttcctatcc ctcggaaatg ttggccaacg 4381 agagtgctcc ctcgtatcac tcacgacggg atgaagccga caagtcggcc gactgttcgt 4441 gctcatcgcc tcagcagagc tccagaggtc gtagtacagg tcgtttggag gatgtgacca 4501 tgcccacctt cgacgacgtt tcctatcaac cgcgtcgcca tcagctgacc atgccctgcg 4561 agaacctgga cgatcagacc cagccggact tcttcaactc cacggcattg cccagttcta 4621 cgagggccga ggggaagcac caggggaagt cgcaaaagaa cctggccgac gagagtgccc 4681 catccatact gaaggactcc tcaaagggac cttccgaagt ggtcaaggag gtgaccgttc 4741 aaagctcgac cacctcggtg acgcgggtct tcaacagctc ggccgaaacg aatgccaaca 4801 actcgggaca gcccatgatc gaggacctct cgatgccgca gttcgagtcc acgggcacta 4861 gtcaggccca tcaggattca tccctgcacg gctttcagtc catggacaac tacaggccat 4921 tcgatgagct gatatacagt cagaactcgg tgggaaatca aactcagccc cagacgccgc 4981 agccagtgag gtctgcgaac cgcagtcgaa gtgtgcgaag aaccccaagc acttctacca 5041 atcgggcggg gactccatcc agtgcaaccg gaattccggg acaaccttgc gatatgatta 5101 ccaccaacta tccctatgga aaaccccatt gcttcagccg aaaaccctgc tagatgaatg 5161 atatatatat atgtaaattg gttttaaaa