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LOCUS XM_070218413 3139 bp mRNA linear INV 09-DEC-2024 like (Rilpl), transcript variant X3, mRNA. ACCESSION XM_070218413 VERSION XM_070218413.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3139 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3139 /gene="Rilpl" /note="Rab interacting lysosomal protein like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058446" CDS 319..1701 /gene="Rilpl" /codon_start=1 /product="RILP-like protein homolog isoform X3" /protein_id="XP_070074514.1" /db_xref="GeneID:108058446" /translation="MPGFHLNEMGEMVLDAIDDIGVVDVYDLASDIGKEYERIMDRFG TDAVSGLMPKIINTLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDK ELELIEEQWRSETNELVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISM TNHELHGALSDTQVLQRLKEQIYKQRDELKHRERELQDKYSELEHLTIQAERLKASER DTRRRHKLMQAQVKTLCEERADFLAQLQDQSREINQLRKRLGLAEKENEDLVASYDDG QNDPNRPRYTTRELKELISERDELLTTIDGLNEQLAELKPPKAKAKRQRNFSSSDDSD EEEDHGHVADNDDDEEEVDVEAPVDELEPPAAGETPPGHDAPVQGPLPYEPDDAPWKK SSESGIRKFFRKLFSDPSDGNNTFPKRSLATLSKMALSATPGSVSASAAANPYKCKNK NKNCAFEIAE" misc_feature 391..879 /gene="Rilpl" /note="JNK_SAPK-associated protein-1; Region: Jnk-SapK_ap_N; pfam09744" /db_xref="CDD:462875" misc_feature <496..>1296 /gene="Rilpl" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" polyA_site 3139 /gene="Rilpl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatcgatgtt ttcatcgatg ttccacctct atcgcaaata aaaaattgca aataaaattg 61 cgaaaagcag attgttgttt aaaagttaaa caaatgcgct taataataac aacgggataa 121 atgcaaaggc gaaactgaac cccacgcaca ctagcgtaag tgtgtgtgtg tgaacggcaa 181 attgcaaagt gcaaattgcg aactgcggag ttacccccct gcccctctgg aaatcccgtg 241 gaaaaccagt ggccaactga agcgggtctt cagcatcccc taggaatagc aggtatctaa 301 tcccaactga ccacctggat gcccggcttc cacctcaatg agatgggtga aatggtcctg 361 gacgccatcg acgacatcgg cgtggtggat gtgtacgatc tggcctccga tattggcaag 421 gagtacgagc ggatcatgga tcgcttcggc acggatgcag tcagcgggct gatgcccaag 481 ataatcaaca cgctggagct cctcgaggcg ctggccacca agaatgagcg cgagaacgcg 541 accatccagg agctgcgcga caaggtggcc cagctggaga gcgagaagct ggagaaggcc 601 gagttccggc ggcgattcga caaggagctg gagctcatcg aggagcagtg gcggagtgag 661 accaacgagc tggtcgatct ggtgtcctcg ctgcaggacg agaacaagcg gctggtgaag 721 caaacgcagg acctgcagtc gtcctcggcc cagagttctg ggctgggcgc cagcctcacc 781 gagagcatca tcagcatgac caaccacgag ctgcacggcg ccctctcgga cacccaggtg 841 ctgcagcgcc tcaaggagca gatatacaag cagcgcgacg agctgaagca ccgcgaacgg 901 gagctgcagg acaagtacag cgagctggag cacctcacta tccaagcgga acgcctaaag 961 gcctcggagc gggacactcg gaggcgccac aagctgatgc aggcccaggt gaagacgctg 1021 tgcgaggagc gcgccgactt tctggcccaa ctgcaggacc agagccgcga gatcaaccag 1081 ctgcgcaagc gcttgggcct ggccgaaaag gagaacgagg atctggtggc ctcctacgat 1141 gatggccaaa acgacccgaa tcggccgcgc tacacgacgc gcgagctcaa ggagctgatc 1201 agcgaacggg acgagctgct gaccaccatc gacgggctca acgagcagct ggccgagctg 1261 aagccgccca aggccaaggc caagcggcag cgcaacttct ccagctccga cgacagcgac 1321 gaggaggaag accacggtca tgtggcggac aacgatgacg acgaggagga ggtggatgtg 1381 gaggctcccg tggacgagtt ggagccgcca gcagccggag aaacgccgcc tggtcacgat 1441 gcgcctgtgc agggaccgct gccctacgaa ccggacgatg cgccctggaa gaagagctcc 1501 gagtcgggaa tacgcaagtt cttccggaaa ctgttctcgg acccctcgga cggcaacaac 1561 acattcccga aacgttcctt ggccacgctc tccaagatgg cgctgtcggc cacgcccggt 1621 tccgtttccg cctccgcagc ggcgaaccca tacaaatgca agaacaagaa caagaattgt 1681 gcttttgaga ttgccgagtg agtttttaat gaatttagac gacaaatgac aagaaaaaga 1741 cacaaagaaa tgaaaacgta tcgaagagga ccccagattt tagagagtgc aagaagaatg 1801 agaaggtttt gcttcaatta tccgtagtct aactatcccc caatctatca atctctcgat 1861 cccggctatc catctgttga aaggtatttt agcattctca tagcagttgc cccaagcggc 1921 cttatacata tatgtattac aaatttatca aaatacgcaa aatttagaga aaaaaaccta 1981 caaaaaaaaa tgatatataa ttagcaaacg ttacaacctt agcgcattgt ttgttgaatt 2041 gaattgaatt aaactaaaac taaacgaaag caaactaagc atattagatt ccattgattg 2101 cattagagtg tgcacaaaga tgccaaaaaa aagataaacg aatcagcgaa tgttttagcc 2161 aagagtttta ccatatagac ttagccattg accatagctc tctcgaattg ttgttaccga 2221 ataactgaat taccgaatta ccgaattgtg aatacgaacc gcacgccagt agctttacga 2281 tcagatatat atcctaaagc ctcaatcccc cccaaaaact tgaaggccca gtgaaagatc 2341 cacagaaatt tggtatccca gcttctgctg ttctgtaatt cattcctaaa ccttataaag 2401 cttttgtaag aacaagttat tctattgctt tccataggga taatttgtaa caaatcaaat 2461 ccgcctccca ctccggttcc ctttccacat ttgcacaaag cgaggaagct accggttaca 2521 tatcagcttt atcgacgatt atcatcgatt taaacgtgcc aaagactaat tgcccctaaa 2581 ttcccatccc cattccaatc cccatgcacc ccacaaacaa tctatctcgt tttaattaca 2641 acaaattgtg gcaactgaat ttttatatat atttgaacat gagcgtaact gtatcgatat 2701 aaaaagatga tgatggacta acgaaaagtg tgtcaagatc aagatcgtta ttttaatgat 2761 cttttcgaag acgacacgaa gcaaaagagg atggagagac attgagtatt tggtgaatta 2821 atgttaacta aatttatata cacatataca ccatgcatta tacataatat actttactat 2881 atactatgta atatcgtatt atatggaact atgactaacc aaaaagaaca acaaggcaac 2941 aattatacaa aattaaaagc gtacttggac cacgggagcg aatacgaccg gaggatcatc 3001 gaggatatag aatcggatcg gatcgtattg gatggaaagc gacgactccg ggtttccttc 3061 taaccctgta cgtaaataca aattatgagt ggctccccaa gagagcgacc attcaaaata 3121 aaacttatga agcattgaa