Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218412 3390 bp mRNA linear INV 09-DEC-2024 like (Rilpl), transcript variant X2, mRNA. ACCESSION XM_070218412 VERSION XM_070218412.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3390 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3390 /gene="Rilpl" /note="Rab interacting lysosomal protein like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058446" CDS 319..1779 /gene="Rilpl" /codon_start=1 /product="RILP-like protein homolog isoform X2" /protein_id="XP_070074513.1" /db_xref="GeneID:108058446" /translation="MPGFHLNEMGEMVLDAIDDIGVVDVYDLASDIGKEYERIMDRFG TDAVSGLMPKIINTLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDK ELELIEEQWRSETNELVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISM TNHELHGALSDTQVLQRLKEQIYKQRDELKHRERELQDKYSELEHLTIQAERLKASER DTRRRHKLMQAQVKTLCEERADFLAQLQDQSREINQLRKRLGLAEKENEDLVASYDDG QNDPNRPRYTTRELKELISERDELLTTIDGLNEQLAELKPPKAKAKRQRNFSSSDDSD EEEDHGHVADNDDDEEEVDVEAPVDELEPPAAGETPPGHDAPVQGPLPYEPDDAPWKK SSESGIRKFFRKLFSDPSDGNNTFPKRSLATLSKMALSATPGSVSASAAANLGNSLYL TLSLAIHLLRLSCTYIVYTLDCCALVLLSCYAIFFT" misc_feature 391..879 /gene="Rilpl" /note="JNK_SAPK-associated protein-1; Region: Jnk-SapK_ap_N; pfam09744" /db_xref="CDD:462875" misc_feature <496..>1296 /gene="Rilpl" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" polyA_site 3390 /gene="Rilpl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatcgatgtt ttcatcgatg ttccacctct atcgcaaata aaaaattgca aataaaattg 61 cgaaaagcag attgttgttt aaaagttaaa caaatgcgct taataataac aacgggataa 121 atgcaaaggc gaaactgaac cccacgcaca ctagcgtaag tgtgtgtgtg tgaacggcaa 181 attgcaaagt gcaaattgcg aactgcggag ttacccccct gcccctctgg aaatcccgtg 241 gaaaaccagt ggccaactga agcgggtctt cagcatcccc taggaatagc aggtatctaa 301 tcccaactga ccacctggat gcccggcttc cacctcaatg agatgggtga aatggtcctg 361 gacgccatcg acgacatcgg cgtggtggat gtgtacgatc tggcctccga tattggcaag 421 gagtacgagc ggatcatgga tcgcttcggc acggatgcag tcagcgggct gatgcccaag 481 ataatcaaca cgctggagct cctcgaggcg ctggccacca agaatgagcg cgagaacgcg 541 accatccagg agctgcgcga caaggtggcc cagctggaga gcgagaagct ggagaaggcc 601 gagttccggc ggcgattcga caaggagctg gagctcatcg aggagcagtg gcggagtgag 661 accaacgagc tggtcgatct ggtgtcctcg ctgcaggacg agaacaagcg gctggtgaag 721 caaacgcagg acctgcagtc gtcctcggcc cagagttctg ggctgggcgc cagcctcacc 781 gagagcatca tcagcatgac caaccacgag ctgcacggcg ccctctcgga cacccaggtg 841 ctgcagcgcc tcaaggagca gatatacaag cagcgcgacg agctgaagca ccgcgaacgg 901 gagctgcagg acaagtacag cgagctggag cacctcacta tccaagcgga acgcctaaag 961 gcctcggagc gggacactcg gaggcgccac aagctgatgc aggcccaggt gaagacgctg 1021 tgcgaggagc gcgccgactt tctggcccaa ctgcaggacc agagccgcga gatcaaccag 1081 ctgcgcaagc gcttgggcct ggccgaaaag gagaacgagg atctggtggc ctcctacgat 1141 gatggccaaa acgacccgaa tcggccgcgc tacacgacgc gcgagctcaa ggagctgatc 1201 agcgaacggg acgagctgct gaccaccatc gacgggctca acgagcagct ggccgagctg 1261 aagccgccca aggccaaggc caagcggcag cgcaacttct ccagctccga cgacagcgac 1321 gaggaggaag accacggtca tgtggcggac aacgatgacg acgaggagga ggtggatgtg 1381 gaggctcccg tggacgagtt ggagccgcca gcagccggag aaacgccgcc tggtcacgat 1441 gcgcctgtgc agggaccgct gccctacgaa ccggacgatg cgccctggaa gaagagctcc 1501 gagtcgggaa tacgcaagtt cttccggaaa ctgttctcgg acccctcgga cggcaacaac 1561 acattcccga aacgttcctt ggccacgctc tccaagatgg cgctgtcggc cacgcccggt 1621 tccgtttccg cctccgcagc ggcgaattta ggcaacagcc tgtatttgac cctgtccctc 1681 gccattcacc tgctccgctt gagctgtaca tacatagttt acacactcga ttgctgtgcc 1741 ctcgtacttc taagttgtta tgcgatcttt tttacgtaac ccgtaactcg taacccgtaa 1801 ctttactgga tatattttat atatcgtttg taccttcgat ttatattcta actttattct 1861 aacgactacc atctaagact ccaaacatac cacacagccc atacaaatgc aagaacaaga 1921 acaagaattg tgcttttgag attgccgagt gagtttttaa tgaatttaga cgacaaatga 1981 caagaaaaag acacaaagaa atgaaaacgt atcgaagagg accccagatt ttagagagtg 2041 caagaagaat gagaaggttt tgcttcaatt atccgtagtc taactatccc ccaatctatc 2101 aatctctcga tcccggctat ccatctgttg aaaggtattt tagcattctc atagcagttg 2161 ccccaagcgg ccttatacat atatgtatta caaatttatc aaaatacgca aaatttagag 2221 aaaaaaacct acaaaaaaaa atgatatata attagcaaac gttacaacct tagcgcattg 2281 tttgttgaat tgaattgaat taaactaaaa ctaaacgaaa gcaaactaag catattagat 2341 tccattgatt gcattagagt gtgcacaaag atgccaaaaa aaagataaac gaatcagcga 2401 atgttttagc caagagtttt accatataga cttagccatt gaccatagct ctctcgaatt 2461 gttgttaccg aataactgaa ttaccgaatt accgaattgt gaatacgaac cgcacgccag 2521 tagctttacg atcagatata tatcctaaag cctcaatccc ccccaaaaac ttgaaggccc 2581 agtgaaagat ccacagaaat ttggtatccc agcttctgct gttctgtaat tcattcctaa 2641 accttataaa gcttttgtaa gaacaagtta ttctattgct ttccataggg ataatttgta 2701 acaaatcaaa tccgcctccc actccggttc cctttccaca tttgcacaaa gcgaggaagc 2761 taccggttac atatcagctt tatcgacgat tatcatcgat ttaaacgtgc caaagactaa 2821 ttgcccctaa attcccatcc ccattccaat ccccatgcac cccacaaaca atctatctcg 2881 ttttaattac aacaaattgt ggcaactgaa tttttatata tatttgaaca tgagcgtaac 2941 tgtatcgata taaaaagatg atgatggact aacgaaaagt gtgtcaagat caagatcgtt 3001 attttaatga tcttttcgaa gacgacacga agcaaaagag gatggagaga cattgagtat 3061 ttggtgaatt aatgttaact aaatttatat acacatatac accatgcatt atacataata 3121 tactttacta tatactatgt aatatcgtat tatatggaac tatgactaac caaaaagaac 3181 aacaaggcaa caattataca aaattaaaag cgtacttgga ccacgggagc gaatacgacc 3241 ggaggatcat cgaggatata gaatcggatc ggatcgtatt ggatggaaag cgacgactcc 3301 gggtttcctt ctaaccctgt acgtaaatac aaattatgag tggctcccca agagagcgac 3361 cattcaaaat aaaacttatg aagcattgaa