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LOCUS XM_070218411 3385 bp mRNA linear INV 09-DEC-2024 like (Rilpl), transcript variant X1, mRNA. ACCESSION XM_070218411 VERSION XM_070218411.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3385 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3385 /gene="Rilpl" /note="Rab interacting lysosomal protein like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058446" CDS 319..1788 /gene="Rilpl" /codon_start=1 /product="RILP-like protein homolog isoform X1" /protein_id="XP_070074512.1" /db_xref="GeneID:108058446" /translation="MPGFHLNEMGEMVLDAIDDIGVVDVYDLASDIGKEYERIMDRFG TDAVSGLMPKIINTLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDK ELELIEEQWRSETNELVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISM TNHELHGALSDTQVLQRLKEQIYKQRDELKHRERELQDKYSELEHLTIQAERLKASER DTRRRHKLMQAQVKTLCEERADFLAQLQDQSREINQLRKRLGLAEKENEDLVASYDDG QNDPNRPRYTTRELKELISERDELLTTIDGLNEQLAELKPPKAKAKRQRNFSSSDDSD EEEDHGHVADNDDDEEEVDVEAPVDELEPPAAGETPPGHDAPVQGPLPYEPDDAPWKK SSESGIRKFFRKLFSDPSDGNNTFPKRSLATLSKMALSATPGSVSASAAAKQQPVFDP VPRHSPAPLELYIHSLHTRLLCPRTSKLLCDLFYVTRNS" misc_feature 391..879 /gene="Rilpl" /note="JNK_SAPK-associated protein-1; Region: Jnk-SapK_ap_N; pfam09744" /db_xref="CDD:462875" misc_feature <496..>1296 /gene="Rilpl" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" polyA_site 3385 /gene="Rilpl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatcgatgtt ttcatcgatg ttccacctct atcgcaaata aaaaattgca aataaaattg 61 cgaaaagcag attgttgttt aaaagttaaa caaatgcgct taataataac aacgggataa 121 atgcaaaggc gaaactgaac cccacgcaca ctagcgtaag tgtgtgtgtg tgaacggcaa 181 attgcaaagt gcaaattgcg aactgcggag ttacccccct gcccctctgg aaatcccgtg 241 gaaaaccagt ggccaactga agcgggtctt cagcatcccc taggaatagc aggtatctaa 301 tcccaactga ccacctggat gcccggcttc cacctcaatg agatgggtga aatggtcctg 361 gacgccatcg acgacatcgg cgtggtggat gtgtacgatc tggcctccga tattggcaag 421 gagtacgagc ggatcatgga tcgcttcggc acggatgcag tcagcgggct gatgcccaag 481 ataatcaaca cgctggagct cctcgaggcg ctggccacca agaatgagcg cgagaacgcg 541 accatccagg agctgcgcga caaggtggcc cagctggaga gcgagaagct ggagaaggcc 601 gagttccggc ggcgattcga caaggagctg gagctcatcg aggagcagtg gcggagtgag 661 accaacgagc tggtcgatct ggtgtcctcg ctgcaggacg agaacaagcg gctggtgaag 721 caaacgcagg acctgcagtc gtcctcggcc cagagttctg ggctgggcgc cagcctcacc 781 gagagcatca tcagcatgac caaccacgag ctgcacggcg ccctctcgga cacccaggtg 841 ctgcagcgcc tcaaggagca gatatacaag cagcgcgacg agctgaagca ccgcgaacgg 901 gagctgcagg acaagtacag cgagctggag cacctcacta tccaagcgga acgcctaaag 961 gcctcggagc gggacactcg gaggcgccac aagctgatgc aggcccaggt gaagacgctg 1021 tgcgaggagc gcgccgactt tctggcccaa ctgcaggacc agagccgcga gatcaaccag 1081 ctgcgcaagc gcttgggcct ggccgaaaag gagaacgagg atctggtggc ctcctacgat 1141 gatggccaaa acgacccgaa tcggccgcgc tacacgacgc gcgagctcaa ggagctgatc 1201 agcgaacggg acgagctgct gaccaccatc gacgggctca acgagcagct ggccgagctg 1261 aagccgccca aggccaaggc caagcggcag cgcaacttct ccagctccga cgacagcgac 1321 gaggaggaag accacggtca tgtggcggac aacgatgacg acgaggagga ggtggatgtg 1381 gaggctcccg tggacgagtt ggagccgcca gcagccggag aaacgccgcc tggtcacgat 1441 gcgcctgtgc agggaccgct gccctacgaa ccggacgatg cgccctggaa gaagagctcc 1501 gagtcgggaa tacgcaagtt cttccggaaa ctgttctcgg acccctcgga cggcaacaac 1561 acattcccga aacgttcctt ggccacgctc tccaagatgg cgctgtcggc cacgcccggt 1621 tccgtttccg cctccgcagc ggcgaagcaa cagcctgtat ttgaccctgt ccctcgccat 1681 tcacctgctc cgcttgagct gtacatacat agtttacaca ctcgattgct gtgccctcgt 1741 acttctaagt tgttatgcga tcttttttac gtaacccgta actcgtaacc cgtaacttta 1801 ctggatatat tttatatatc gtttgtacct tcgatttata ttctaacttt attctaacga 1861 ctaccatcta agactccaaa cataccacac agcccataca aatgcaagaa caagaacaag 1921 aattgtgctt ttgagattgc cgagtgagtt tttaatgaat ttagacgaca aatgacaaga 1981 aaaagacaca aagaaatgaa aacgtatcga agaggacccc agattttaga gagtgcaaga 2041 agaatgagaa ggttttgctt caattatccg tagtctaact atcccccaat ctatcaatct 2101 ctcgatcccg gctatccatc tgttgaaagg tattttagca ttctcatagc agttgcccca 2161 agcggcctta tacatatatg tattacaaat ttatcaaaat acgcaaaatt tagagaaaaa 2221 aacctacaaa aaaaaatgat atataattag caaacgttac aaccttagcg cattgtttgt 2281 tgaattgaat tgaattaaac taaaactaaa cgaaagcaaa ctaagcatat tagattccat 2341 tgattgcatt agagtgtgca caaagatgcc aaaaaaaaga taaacgaatc agcgaatgtt 2401 ttagccaaga gttttaccat atagacttag ccattgacca tagctctctc gaattgttgt 2461 taccgaataa ctgaattacc gaattaccga attgtgaata cgaaccgcac gccagtagct 2521 ttacgatcag atatatatcc taaagcctca atccccccca aaaacttgaa ggcccagtga 2581 aagatccaca gaaatttggt atcccagctt ctgctgttct gtaattcatt cctaaacctt 2641 ataaagcttt tgtaagaaca agttattcta ttgctttcca tagggataat ttgtaacaaa 2701 tcaaatccgc ctcccactcc ggttcccttt ccacatttgc acaaagcgag gaagctaccg 2761 gttacatatc agctttatcg acgattatca tcgatttaaa cgtgccaaag actaattgcc 2821 cctaaattcc catccccatt ccaatcccca tgcaccccac aaacaatcta tctcgtttta 2881 attacaacaa attgtggcaa ctgaattttt atatatattt gaacatgagc gtaactgtat 2941 cgatataaaa agatgatgat ggactaacga aaagtgtgtc aagatcaaga tcgttatttt 3001 aatgatcttt tcgaagacga cacgaagcaa aagaggatgg agagacattg agtatttggt 3061 gaattaatgt taactaaatt tatatacaca tatacaccat gcattataca taatatactt 3121 tactatatac tatgtaatat cgtattatat ggaactatga ctaaccaaaa agaacaacaa 3181 ggcaacaatt atacaaaatt aaaagcgtac ttggaccacg ggagcgaata cgaccggagg 3241 atcatcgagg atatagaatc ggatcggatc gtattggatg gaaagcgacg actccgggtt 3301 tccttctaac cctgtacgta aatacaaatt atgagtggct ccccaagaga gcgaccattc 3361 aaaataaaac ttatgaagca ttgaa