Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218402 1981 bp mRNA linear INV 09-DEC-2024 wap (wap), transcript variant X2, mRNA. ACCESSION XM_070218402 VERSION XM_070218402.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1981 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1981 /gene="wap" /note="DDB1 and CUL4 associated factor wap; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058869" CDS 808..1839 /gene="wap" /codon_start=1 /product="DDB1- and CUL4-associated factor 7" /protein_id="XP_070074503.1" /db_xref="GeneID:108058869" /translation="MSSTAGKRKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFIEEY NNKVQIISLDEDTSEFSAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRVWRAG EPDTRLECVLNNNKNSDFCAPLTSFDWNEVDPNLVGTSSIDTTCTIWGLETGQPHARV YVAGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYED PAHTALLRLAWNKQDPNYLATVAMDSCEVIILDVRVPCTPVARLSNHRACVNGIAWAP HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICY NKACEILRV" misc_feature 862..1692 /gene="wap" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature order(916..918,940..942,958..963,997..999,1009..1011, 1078..1080,1102..1104,1135..1137,1165..1167,1219..1221, 1234..1236,1252..1257,1276..1278,1288..1290,1321..1326, 1384..1386,1399..1401,1417..1422,1465..1470,1519..1521, 1534..1536,1555..1560,1597..1602,1657..1659,1669..1671, 1687..1692) /gene="wap" /note="structural tetrad [active]" /db_xref="CDD:238121" misc_feature 1030..1158 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1180..1320 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1336..1458 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1477..1599 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1612..1689 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" polyA_site 1981 /gene="wap" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtggcatcga ttgcttcaca gctaccagct ctagtttttg tgtgtgaaaa ttcttgcgaa 61 aagattctgt taaaagttct tcgatcacaa attccgcgca acgccgttta ccgcctttgt 121 gccgccccag cgaattgcgt ttggcccgtc gtttgccaat accaataggt aaagccgacg 181 cagattgcga atgcaaaggc cgcacaaacg aattgtcgcg tcgcattacg ttttagtgtt 241 gccaactttt ccggagtgcc gggaacatat taatttcctc gccgaacgga cgcattgcgg 301 ccgagatgtg cacgccgcta gattgatttg cacgccctgt ttattgggta cactgcggat 361 agtccgatct gtgttctcca gcctccaact tgggcggaaa agcgccggcg aaaggcggat 421 tctagccgga aaacggccaa gctggcagca ctgccagggc acaaaaaatg aagtgaattt 481 cggaaaaagg ctaagctaca ggataagcca aaagtaaagc ctgccggtag agtgtgcaaa 541 tgcgagtggc cagcgaagac ctttgttttc cattccatga cgttttgttg agttgtccgc 601 tgctctaagg tggtcatcat tatcactcac tatcatcatt attatcatca tcaacggggt 661 cgtcgtcatt cagccagcca cccacaacca cccaccagaa aaacggcctt gaggaaactt 721 aacagcacct catcatccaa gtctaaatct tcgccttggt ctgggtatcc catcacagtg 781 ttcagatcct ttccctaatc cacagttatg tcatcgaccg ccggtaagcg caaggagatc 841 tataaatatc tcgcaccatg gccactgtac tccatgaact ggagtgtccg gccggacaag 901 cgattccgac tcgcactggg cagcttcatc gaggagtaca acaacaaggt gcagatcatc 961 agcctggacg aggacaccag cgaatttagt gctaaaagca cctttgacca tccatatccg 1021 acaaccaaga ttatgtggat accggactcc aaaggcgtct atccggatct gctggcaacc 1081 agcggcgact atctgcgggt gtggcgtgcc ggcgagccgg acacacggct cgaatgcgtg 1141 ctgaataaca acaagaacag cgacttctgc gccccgctta cctcgtttga ttggaacgag 1201 gtagatccca atcttgtggg cacctcctct atagacacca cttgcactat ctggggactg 1261 gagaccggac agccgcacgc ccgcgtctat gtggcggggc acgtgaagac gcaactgatt 1321 gcccacgaca aggaggtcta cgacattgcc ttttcgcggg caggcggtgg tcgggacatg 1381 ttcgcctcgg tgggagcgga cggatcggtg cgcatgtttg atttgcggca tttggagcac 1441 tcgaccatta tctatgagga tcctgcccac acggcgctgc tgcgcttggc ctggaacaaa 1501 caggacccga actatttagc caccgttgcc atggactcgt gcgaagttat aattttagat 1561 gttcgtgttc cttgtacacc cgttgcaaga ctgagcaatc acagagcgtg cgtcaacggt 1621 attgcgtggg cgccgcatag ttcctgtcac atctgcactg ccggtgatga tcaccaagca 1681 ctgatctggg atatacaaca aatgccacgc gcaatagagg atccaatttt agcctataca 1741 gctgccgagg gcgaagtcaa tcagatccag tggggcgcca cacagcccga ctggatagcc 1801 atttgctaca acaaagcgtg cgagattctg cgggtctaag agtcaatttt ttggtctggt 1861 ccctggctat agcacctgtt tgcaattgct gaacaacgca cagtcaaaaa aaaaaacaga 1921 aaagtcagac aaaacacaca ccacccacaa aaacacacac atttgctgtt ggaaacttgg 1981 a