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LOCUS XM_070218397 1643 bp mRNA linear INV 09-DEC-2024 (LOC108056713), transcript variant X2, mRNA. ACCESSION XM_070218397 VERSION XM_070218397.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1643 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1643 /gene="LOC108056713" /note="E3 ubiquitin ligase Rnf121; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108056713" CDS 215..1180 /gene="LOC108056713" /codon_start=1 /product="E3 ubiquitin ligase Rnf121" /protein_id="XP_070074498.1" /db_xref="GeneID:108056713" /translation="MHQQHMDLHAPVDLNKSLDEMTPEERMRAEHQLMVEKHRGHDAM HSEMVIILFVTLVIAQIILVEWKKRHYSSYAFVTLLAMWLIPLIISCSFGWLRFILIW LVFTCITALVMRRAISKPIQGTTPRLVYKWFYFIYKLSYGLGLVGYLVIMAAFLGMNY LFSQPPNTWMDVGLMFCFYGLYIGVLGRDISEICSDKMAAAIGYYTPQGIPTRHLDQN VCAVCGNQLLVSEKEEGVIENTYKLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLQ KMFRNPWEKPHVLYGRLLDWIRWLVAWQPLIFFIVQGINWMLGLE" misc_feature 866..1030 /gene="LOC108056713" /note="RING finger, H2 subclass, found in RING finger proteins RNF121, RNF175 and similar proteins; Region: RING-H2_RNF121-like; cd16475" /db_xref="CDD:438138" polyA_site 1643 /gene="LOC108056713" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gctgactggg cataaacata gtgcggatct ggcaacgctg gcctcgaacg ttttctgttt 61 aggttatcag aaaacgtcgt cgtcgcctaa ttaaatcaag aggtaaaaac cgaacgcact 121 acgtggtgac aagattaccc agcgacgcag acgacgagtg ggactgtccg gcggattggg 181 ggcagcggga aacggcggtt acaacggcaa caagatgcac cagcagcaca tggacctcca 241 tgcgcccgtg gacctgaaca agtccctgga cgagatgacg ccggaggagc ggatgagagc 301 ggagcaccaa ctgatggtgg agaagcatcg cggccacgac gccatgcact ccgaaatggt 361 catcatcctg ttcgtcaccc tggtcatcgc ccagatcatc ctggtcgagt ggaagaagcg 421 ccactacagc tcctacgcct tcgtcaccct gctggccatg tggctcatcc cgctgatcat 481 ctcctgcagc ttcggctggc tgcgcttcat cctcatctgg ctggtcttca cctgcatcac 541 ggccctggtg atgcgtcggg ccatcagcaa gcccatccag ggcacaacgc ccaggctggt 601 ctacaagtgg ttctacttca tctacaaact gagctatggg ctcggtctgg tgggctacct 661 ggtgatcatg gccgccttcc tgggcatgaa ctacctgttc tcgcagccac cgaacacctg 721 gatggacgtg ggcctgatgt tctgcttcta cgggctgtat atcggtgttc tagggcggga 781 tatatccgag atatgttcgg ataagatggc ggcagccata ggctactaca caccgcaggg 841 catccccacg cggcatctgg atcagaatgt ctgcgccgtt tgcggcaatc agctgctggt 901 ctccgaaaag gaggagggcg tcatcgagaa cacctacaag ctgtcctgca accatgtgtt 961 ccacgagttc tgcatacgcg gctggtgcat tgtgggcaag aagcagacgt gtccctactg 1021 caaggagaag gtcgatctgc agaagatgtt ccgcaatccc tgggagaagc cgcatgtgct 1081 gtacggacgc ctgctggact ggatccgctg gctggtggcc tggcagccgc tcatcttctt 1141 catagtacaa ggcatcaact ggatgctggg actggaatag gtccttcgct agctttcctc 1201 ggcgtctagt caagcacaca cactttggat caagtcctgc acatgcaaca ccacacagaa 1261 gacacgacga cagacgacag accaattgga ggggtggcga gtcaccagga gcaccactag 1321 caccatcatt cccccgccgc tcccctccag aactctccat ccaaccgttt tccgggtttc 1381 cgtttccgtt tccagttctg tgtgtgtttt gctcttcggg cacccaactt ttccattcgt 1441 tcagtctcta atcgaaacgt aaatgcaatt tcggatatat gcatctatat ctatatatta 1501 tagctatgta tttatgtaca tatgtgtgcc tgtgtgtatg tctcctaggt attattgccg 1561 attttatttt cttgattcta ttaattgcac tggagctggt taggaataaa catataccaa 1621 aaaatacatc tattgataaa gta