PREDICTED: Drosophila takahashii REST corepressor (CoRest),

LOCUS       XM_070218395            1256 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X4, mRNA.
ACCESSION   XM_070218395
VERSION     XM_070218395.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1256
                     /gene="CoRest"
                     /note="REST corepressor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108056100"
     CDS             369..1241
                     /gene="CoRest"
                     /codon_start=1
                     /product="REST corepressor isoform X3"
                     /protein_id="XP_070074496.1"
                     /db_xref="GeneID:108056100"
                     /translation="MVLAERNTTDVVRNGRRSRGPSPNTHTPGGGGVANNANSLVGGG
                     GGGGGNSGNPNANEKNASTAVPGAGTPESSDDDNSTKRNGKSKAKQSEYEEKIRVGRD
                     YQAVCPPLVPEVERRPEQMNERALLVWSPTKEIPDLKLEEYISVAKEKYGYNGEQALG
                     MLFWHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIA
                     SLVKYYYSWKKTRHRSSAMDRQEKTIKAVVKDGSENGSEVGSNEESDNDDKKPHPKRE
                     VSRPSRQLLTQRIA"
     misc_feature    657..815
                     /gene="CoRest"
                     /note="ELM2 domain; Region: ELM2; pfam01448"
                     /db_xref="CDD:460214"
     misc_feature    921..1055
                     /gene="CoRest"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cl21498"
                     /db_xref="CDD:473887"
     misc_feature    order(924..926,1011..1016,1020..1025,1029..1037,
                     1041..1049)
                     /gene="CoRest"
                     /note="putative DNA binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:212559"
ORIGIN      
        1 gtgtatccat tgcaaccgtg gctgctacag ccacagttta aattaacttt gagcattcgc
       61 tcgattttca gccgtatcct gtcgtcaaac tccgcgagtg tgcatttaaa gggcccaaga
      121 agccgcttcg ttttcgatct cgaattgcgg ggcaactggc gatacctgga gggccgtgcg
      181 acgagaacgc caggcgaggg caaaaaaatc ggatcaaccg acagacaaag ctgaactgcg
      241 gtcgtcgccg acaaagtgcg ctgtgcacac acggacggcc atagagagaa tcgtgctcga
      301 caagtgtttg gtgaacagct agcaccctgg agaagcaaaa caagcgcgcc cagctcatcc
      361 gggacaagat ggtgttggcg gagcgcaaca ccacggacgt ggtgcggaac ggtcgtcggt
      421 cgcgcggtcc cagtcccaat acccacacgc ccggcggcgg tggggtggcc aacaatgcca
      481 acagcctcgt gggcggtggc ggaggaggcg gcgggaactc cgggaacccg aatgccaacg
      541 agaagaacgc ctccacagcc gtgccgggcg cagggacgcc ggagagctcg gacgacgaca
      601 actccaccaa gcgcaatggg aaaagcaagg ccaagcagtc ggagtacgaa gagaaaatcc
      661 gcgtgggtcg cgactaccag gctgtgtgcc cgcctttggt tccggaggtg gagcggaggc
      721 ccgaacagat gaacgaacgc gcactcctcg tctggtcgcc caccaaggag attcccgatc
      781 tgaaattgga ggagtacatc tcggtggcca aggagaagta cggctacaac ggcgaacagg
      841 ctctgggcat gctcttctgg cacaagcacg acctggaacg ggccgtcatg gatctggcca
      901 acttcacgcc cttcccggac gagtggacca tcgaggataa ggtgctgttc gagcaggcct
      961 tccagtttca cgggaagagc ttccaccgca tccgccagat gctgccggac aaatcaatag
     1021 ccagtttggt caagtattac tactcgtgga agaagacgcg ccatcgcagc agcgccatgg
     1081 atcgccagga gaagaccatc aaggcggtgg tcaaggatgg ctccgagaac ggcagcgagg
     1141 tgggcagcaa tgaggagtct gataacgatg acaagaaacc acatccaaaa agagaggtca
     1201 gccgaccaag taggcagctt ttaacacaaa gaatcgcata atctaggagt agagct