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LOCUS XM_070218391 2532 bp mRNA linear INV 09-DEC-2024 member Pmp70 (Abcd3), transcript variant X2, mRNA. ACCESSION XM_070218391 VERSION XM_070218391.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2532 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2532 /gene="Abcd3" /note="ATP binding cassette subfamily D member Pmp70; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108070206" CDS 173..2158 /gene="Abcd3" /codon_start=1 /product="ATP-binding cassette sub-family D member 3" /protein_id="XP_070074492.1" /db_xref="GeneID:108070206" /translation="MAPALSKLANNQSAIVGVAGMTAALWIIAYGKMSNKKRKPGYED KIQYTIAEKKEKKAAKAHVNSVFFKQLRQLLPILIPGFWSIETGLLFLVAAALIGRSV SDIWMIQNATVVESTIIHMNRTKFKSALLKYLTALPAISVVTNVLKWSLGELKLRFRT NLTHHLYSQYLNGYTYYKMSNLDNRIANADQLLTTDIDKFCESATDLYSNISKPVLDI FIYVYRLTVNLGGKTPSILMLYLLFAGVFLTRLRRPTGRLTVEEQKLEGEFRYVNSRL ITNSEEVAFYQGNVREKLTLLASYSKLRSHLRKFLEFRVSMGIIDNIIGKYFASIVGF YAVSIPFFAENHPLLSGEQSGQRLQAYYTYGRMLVKLAEAIGRLVLAGREMSRLAGFT ARMTELIKVLGDLNKGTYERTMINGNNISQETAGNFGPNKGIMCFEDNIIRFEKVPLV TPNGDVLLQELTFEVKSGTNVLVCGPNGCGKSSLFRILGELWPTWGGKVTKPSRGKLF YIPQRPYMTLGTLRDQIIYPHTREDMRRLGQSDEDLMHYLDIVQLTYLEQRENGLDAI EDWIDVLSGGEKQRIAMARLFYHRPQFAILDECTSAVSVDVEGKMYSYCREVGITLFT VSHRKSLWAHHDYYLQFDGRGSYEFATIDQDKDHFGS" misc_feature 179..2119 /gene="Abcd3" /note="Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein; Region: 3a01203; TIGR00954" /db_xref="CDD:273360" polyA_site 2532 /gene="Abcd3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaagctgtgc tggcagcgcc gccccgacta gaccagcact ggcacaatcg aactaagtta 61 gtcgctcgtt tcacctacct acgaaagttt ccccgacttg gccgagcaga gtaaagttgc 121 gaacgcggaa cacgcgaatt cctgagttcc cgaattccga acgaaaagca ttatggcccc 181 ggctttgagc aagttggcca acaaccagag cgccatcgtc ggcgtggcgg gcatgacggc 241 ggccctctgg ataatcgcct acggcaagat gtccaacaag aagagaaaac ccggctatga 301 ggacaagatc cagtacacaa ttgcggaaaa gaaggagaag aaggcggcca aggcccatgt 361 gaactcagta ttcttcaagc agctgcgcca gcttttgccc atcctcatcc cgggcttctg 421 gagcatcgag actggcctgc tcttcctggt ggcagccgca ctgatcggtc gctcggtgag 481 cgacatctgg atgatccaga acgcgactgt ggtggagagc accatcatac acatgaaccg 541 caccaagttc aagtcggcgc tgcttaaata tctgacagct ctgccagcga tctctgtggt 601 gaccaacgtc ctcaagtgga gcttgggcga gctgaagctg aggttccgca ccaacctcac 661 gcatcacctg tacagtcagt acctaaatgg ctacacctac tacaaaatgt ccaatctgga 721 caacaggata gccaacgccg accagctgct gaccacggac atcgacaagt tctgcgagag 781 cgccacggat ctgtactcga acatcagcaa gcccgtgctg gacatcttca tctacgtcta 841 ccgcctgacc gtcaatctgg gcggcaagac gccctccatc ctgatgctct acctgctctt 901 cgccggcgtc ttcctgaccc gcctgcgccg gcccaccggc cgcctgaccg tcgaggagca 961 gaagctggag ggcgagttcc gctacgtgaa cagccggctg atcaccaact cggaggaggt 1021 ggccttctac cagggcaacg tgcgcgagaa gctcacgctg ctggccagct actccaagct 1081 gcgctcgcac ctgcgcaagt tcctcgagtt ccgcgtcagc atgggcataa tcgacaacat 1141 catcgggaaa tatttcgcct ccattgtggg cttctatgcc gtctccattc ccttcttcgc 1201 cgagaaccat ccgctgctgt ccggcgagca gagcggccag cgtctgcagg cctactacac 1261 ctacggccgg atgctggtca agctggcgga ggccattgga cgcctggtgc tggccggacg 1321 cgagatgtcc cgcctggcgg gcttcacggc ccgcatgacg gagctgatca aggtgctggg 1381 cgacctgaac aagggcacct acgagcgcac catgatcaat ggcaacaaca tcagccagga 1441 gacggctggc aacttcgggc ccaacaaggg catcatgtgc ttcgaggaca acatcatacg 1501 gttcgagaag gtgccgctgg tgacgcccaa cggcgatgtg ctgctgcagg agctcacctt 1561 cgaggtgaag tcgggcacta atgttctggt ttgcggcccc aatggctgcg gcaagtcctc 1621 gctgttccgc atcctcggcg agctgtggcc cacgtggggc ggcaaggtga cgaagccgtc 1681 gcgcggcaag ctcttctaca taccgcagag gccctacatg acgctgggca cgctgcgcga 1741 ccagataatc tacccccaca cgcgcgagga catgcggcgg ctgggccaga gcgacgagga 1801 tctcatgcac tacctggaca tcgtgcagct gacctatttg gagcagcgcg agaacggcct 1861 ggatgccatc gaggactgga tcgatgtgct gagcggcggc gagaagcagc gcatcgccat 1921 ggcgcggctc ttctaccatc ggccgcagtt cgccatcctg gacgagtgca ccagcgccgt 1981 atccgttgac gtcgagggca agatgtacag ctactgccgc gaggtgggca tcacgctgtt 2041 caccgtctcg caccgcaagt cgctgtgggc gcaccacgac tactacctgc agttcgacgg 2101 ccggggcagc tacgagtttg cgaccatcga ccaggacaag gaccactttg gctcctaagt 2161 tctatcgccc gatgaccagc tatccagatt cccagctgta aacttcggtg ttgggccaat 2221 cccgcttcag ctcctcctcc tccattttgg tgcactgtat ataccgagat atgtatatat 2281 tgcgagctgg aagacccttc ttgctttcct gtttcaattg tgatcgtttc gtttgtacgc 2341 tattccacac tctattccgt tttaatataa ttaccgccct ccgctggcac tttagatgtg 2401 taaaagacgt aagcgtaaag tagtcgagat ggcagacctt atagcaaata aataccttta 2461 caccaaccga ccgcacaagc cccaaatcgc gcatagaaaa catagtacat atatagtaat 2521 ttgtaaacta ca