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LOCUS XM_070218379 3979 bp mRNA linear INV 09-DEC-2024 (LOC108067728), transcript variant X2, mRNA. ACCESSION XM_070218379 VERSION XM_070218379.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3979 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3979 /gene="LOC108067728" /note="uncharacterized LOC108067728; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108067728" CDS 895..3978 /gene="LOC108067728" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070074480.1" /db_xref="GeneID:108067728" /translation="MEPDPNGIKIEPSLDQQQYATHVLAINGSNARLLIEHPSALLVP LSSHHQLQLQQQQQQQQQQQHVQQQHQQQQQQQQFQQQQQQHLHQQQQDQLQFQQQHL QLYAHTPLKQQQLQQQQQQQQQQQQEPTPLGPTSSASSASLTGASTTGGHQQRWNESP EARQRRLARNAERMRERRQRESEDEYRKRLLRNAEANRQRRQNESDIERAMRLVRNAA RQRLRRAMESPDQRAKRLAKLAERMRMYRASETNDQRKQRLAEMAARARQRIANESPE ERKERLRKLNDYAKKVREKKKVLKHVVVHGGSSSVVAVSTPTSSSSSTDQQHHHQQQQ HQQQQQQQQQQQQQQHQQQQQQAASNAATTTTTDEAGTPQPTEEQQQQHLVTAAAYQQ HQALAGVEYMGSGMFLAPGSLRPPMQLKQEPQTPQQQQQQQINQQLQQQQHQRYTITG QQQQQVTAALLEGTEPGSIFVQQIYGDDGGKGTAKLLQAHVPHFSIAGGQLELYPHKY AAKKQELQSDGDAPGSAGGNDNSGSVSLGHNQETKVIVTTASGEQKLLKATPGQAQQL YQQFPYLATFPSPSTTTTTSGGGGGGNNVVTAGTTTAAGGTTYYPMYHNGFQIGIGPN PVPPPFTPVNFASGGGHSPSGGQYNILAANPTLTVTGLGQQQQAEPPPQIVSSTGSTT TTTAGRGRPRKHPLASEEQLKVNSLLEQELNQMLAAPQLATSTPRRGRPLSHSSDHLS QIHVHSTADGDSRTQVTPMTTTTTTPRRSGANKYETEEEKRLRLDKMAAHQRAVRANE TPEQRATRLQKLSERARLKRAQIRATENTDERKERLSKQAEYARMRRMRSHTPRSSSA TSTEFRAKTEEEDEEDNEDEQEQQLYGDAEAVSVTGTGSDGGFVTVVKADDDEDEGSP GDVSNDHELPSLQLQHHELQQLEQQLVQQQQQQQHHEAIVLNQQHRLVTISQQQQHLH QQQQQSHPGFSKLQVASGGGSAGGAPGSGGGNGTGAPENNDMLKILEPIIVMKTK" misc_feature <1360..>1746 /gene="LOC108067728" /note="Family of unknown function (DUF5923); Region: DUF5923; pfam19343" /db_xref="CDD:466049" ORIGIN 1 cagtgtgacc aaacgcgatg gattaataca aaaaaaaaaa gaaaatgaaa acaacagata 61 taaaactaag taaattcaat taaaagaaca gaacagtgcc acgacctgcg aaagcgcagc 121 aaaatagagt gcaaatcaga gacaatccga tccggtcgga agtggaagcg gaagatatat 181 atgccagctg tgtggtaaat ccccgctatt tgcagccaaa gtcggtagct acgagcgaca 241 gaagcgccgc cagtccagtt cttaacccac cagaggctgc gaaaacaacg cttaaatgga 301 actaaatcgc agagggttaa ggtttgtgcg aaaggcaaaa taaggagcgg aaaaaaactc 361 gcacacacgt acacgcagcg gcggcgtatg tgtgagtgtg tgtgctcggc agtgcgtgtg 421 tgtgcgtgcc gcatgggtgt gtgtgtataa tcatgtgaaa aatcgattgg cagcgcagca 481 gcagcgcggc ggcggcgcca attgtcactt actcgaaaga agaagcacgc tttttcaaaa 541 gaacgcgaaa aaagctaaag aacccagaac gcatatcaaa tcaaggagca ggagcaggaa 601 agaaatgatc gatttagcaa aagtcagcga tcggatcgcc gcaaagtccc gctgagagag 661 agcgagagcg agagaggaat aacacagcag cagaagcaca tatttatata acttggcagc 721 aaaagagcgg gagagtgcga gggagagagc aagagcgcgg cccctagatg ttatcgaaac 781 aatcggaagg actgcgctca tcctttcgat aaccacacta cacaccactg cactcctgag 841 ccaccgatag acgacaattg cgattgttgt tgcccccggc ttttgaccaa gaatatggaa 901 ccagatccca atgggataaa aatagagccc tcactcgatc agcagcagta cgccacccat 961 gtgctggcca tcaatggctc caatgcccgc ctcctcatcg agcatccctc agcattgttg 1021 gtacccctct cctcgcatca ccagttgcag ttgcaacagc agcaacagca gcagcagcag 1081 caacagcacg tgcagcagca acaccagcag cagcagcagc agcaacagtt ccaacagcag 1141 cagcagcagc atctccacca gcagcagcag gatcaactgc agttccagca acagcacctc 1201 cagctttatg cccacacccc actgaagcag caacagttgc aacagcaaca gcagcagcag 1261 cagcagcagc aacaggagcc cactcccctg ggacccacga gcagcgccag cagcgcctcc 1321 cttacaggcg cctccaccac tggcggccac cagcagcggt ggaacgagag tcccgaggct 1381 cgccagcgcc gtctggccag aaatgctgag aggatgcggg agcgacggca gcgcgagagc 1441 gaggacgagt accggaagcg gctgctccgg aatgcggagg ccaataggca aaggcgccag 1501 aacgaatcgg acatagagcg agccatgcgg ctggtgagga atgcggccag gcagcggctg 1561 cgaagggcca tggagtcgcc cgatcagagg gccaagcggc tggccaagct ggccgaaagg 1621 atgcgcatgt accgggccag cgagacgaac gaccagcgga agcagcgact ggctgagatg 1681 gcggcgaggg cgcgccagag gatcgccaac gagtcgccgg aggagcgcaa ggaaagactg 1741 agaaagctga acgactatgc caaaaaggtc agagaaaaga agaaggtact gaagcatgtt 1801 gtggtgcacg gtggttcgtc gtcggtggtc gccgtctcaa cgccgacatc ctcctcgtcg 1861 tcaacggacc agcagcacca ccaccagcaa cagcaacacc agcaacaaca gcagcagcaa 1921 cagcagcagc agcagcaaca acatcagcag cagcagcagc aggcggccag caacgcagcg 1981 acgacgacga cgacggacga ggctgggacc ccgcagccaa cggaggagca gcagcagcag 2041 catctggtga cggcagccgc ctaccagcag catcaggcgc tcgccggcgt ggagtacatg 2101 ggctcgggca tgttcctggc ccccggctcc ctgcgaccgc ccatgcagct caagcaggag 2161 ccccagacgc cgcagcagca gcagcagcag cagatcaacc agcagctgca gcagcagcag 2221 catcagcggt acaccatcac cgggcagcag cagcaacagg tcaccgccgc cctgctcgag 2281 ggcaccgagc cgggcagcat ctttgtccag cagatctacg gcgatgacgg gggcaagggc 2341 accgccaagc tgctccaggc ccatgtgccc cacttcagca tcgccggcgg ccagttggag 2401 ctgtacccgc acaaatatgc cgccaagaag caggaacttc agtcggacgg cgatgctccg 2461 ggatcggcgg gcggcaacga taacagcggg tctgttagtc tgggccacaa ccaggagacc 2521 aaggtgatcg tgacgacggc cagcggggag cagaagctgc tcaaggcgac gcccggtcag 2581 gcgcagcagc tgtaccagca gttcccctac ctggccacct tcccgagccc cagcaccacc 2641 accaccacca gtggaggcgg cggaggaggg aacaatgtcg tgactgcggg caccacgacg 2701 gcagccggcg gcaccaccta ctatccgatg tatcacaatg gcttccagat cggcatcgga 2761 ccgaatccgg tgccgccgcc cttcacgccc gtcaactttg ccagcggcgg cggccacagt 2821 ccctccggcg gccagtacaa catcctggcg gcgaatccca cgctcacggt cacgggattg 2881 ggtcagcagc agcaggcgga gcctccgccg cagatcgtca gcagcaccgg cagcaccacc 2941 accaccactg ctggtcgggg caggccgcgc aagcatccgc tggccagcga ggagcagctg 3001 aaggtgaaca gcctgctgga gcaggagctc aaccagatgc tggcggcccc gcagctggcc 3061 accagcacgc cgcgtcgcgg caggccgctc agccactcat cggatcatct tagccagatt 3121 catgtacatt ccacggccga tggcgacagt cgaacgcagg tgacaccgat gacgacgacg 3181 acgacgacgc cgcgacgcag cggggccaac aagtacgaga cggaggagga gaagcgcctg 3241 cgactggaca agatggccgc ccatcagcgg gcggtgcggg cgaacgagac gcccgagcag 3301 cgggccacgc gcctccagaa gctcagcgag cgggcgcgac tgaagcgggc gcagatcagg 3361 gccaccgaga atacggacga gcgcaaggag cggctgtcca agcaggccga gtatgcgcga 3421 atgcggcgca tgcgcagcca cacgccgcgc agcagcagcg ccaccagcac cgagttccgg 3481 gccaagaccg aggaggagga cgaggaggat aacgaggacg agcaggagca acagctgtac 3541 ggagatgcgg aggccgtttc ggtcactggc acgggcagcg atggcggctt cgtgacggtg 3601 gtcaaggcgg atgacgacga ggatgaggga tcaccgggcg atgtctccaa tgaccacgag 3661 ctgccttcct tgcagctgca gcaccacgag ctgcagcagc ttgagcagca gttggtgcag 3721 cagcagcagc agcagcagca tcacgaggcg attgtgctga atcagcagca ccgactggtc 3781 accatcagtc agcagcagca gcatctccac cagcagcagc agcagtcgca tcccggcttc 3841 agcaaacttc aggtggccag cggaggaggc agcgcaggag gagctcctgg ctctggcggc 3901 ggcaatggaa ccggagcacc cgaaaacaat gacatgctca agatactcga gccaatcatt 3961 gtgatgaaga ccaaatgag