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LOCUS XM_070218376 7154 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070218376 VERSION XM_070218376.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7154 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7154 /gene="shakB" /note="shaking B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108062291" CDS 1903..3036 /gene="shakB" /codon_start=1 /product="innexin shaking-B isoform X1" /protein_id="XP_070074477.1" /db_xref="GeneID:108062291" /translation="MEFLRGVYAFMQVSRSSVSHVKIDSPVFRLHTNATVILLITFSI AVTTRQYVGNPIDCVHTRDIPEDVLNTYCWIHSTYTVVDAFMKKQGSEVPFPGVHNSQ GRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKSWEGGKIHALIMDLDIGICSEAE KKQKKKLLLDYLWENLRYHNWWAYRYYVCELLALINVIGQMFLMNRFFDGEFMTFGLD VIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIF LWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGDWF LLYLLGENIDTVIFRDVVQDLANRLGHNQHHRVPGLKGEIQDA" misc_feature 1975..2976 /gene="shakB" /note="Region: Innexin; pfam00876" /db_xref="CDD:459975" polyA_site 7154 /gene="shakB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgtttttc cgcgtgttcg cacacgttca cggcagcgag aacaacaacg tgcggtgttg 61 tgagcttgcc gctaaaatca aatgaaagtc caagccaagc gaaagtcgac gaataaagtg 121 gcaatatgca gtgcgtgtgc atagaaaaac cagatataca gcggccacag ggtaaagtac 181 tttggacaag tgtcaaatcc ccgaaacgcc agtgaaagaa agaaagaaaa tcgaaggaaa 241 aatcaacata cagcagcata cgcagagaaa atcgctggaa aaccggacaa aatgtttggc 301 agccaaagtg gctgcctttg aggctgagtg agtggctcaa gcacgaagac cttttttaag 361 acagaaagcc tagagaaact agaaaaagtg cagaaagaga aatttcgaat tattacgaga 421 atcttcttat atttgaaata ttttcaaatt caaatttaaa taactttatt cttaataaaa 481 actaattgat aattaattac ataatagtaa acaaagctca aatagactga aatagagtcc 541 aaatatatta cgaaagtaaa atgcaattaa ttcaacatat catataaatt aattagaaca 601 aattgcattt aagttataaa acaaagcgaa agcaaaacaa aacaacaagc gtataataat 661 tacacgcaaa caaagggcag gaaaaatcga atgaacaaaa gtcaaaaaat aaacacgcaa 721 aaaaagggcg aaaagtgagc gagagaaaaa ataataaaaa gagatcaatg tgcaaaaagt 781 gctaaggagg agaagaagaa ccaataaccc atataaaata ctgtaaaatt cgccgtttag 841 ttcgcgtttc aattaaattt aataataaat tactatgcta aatccaagga cataaatgga 901 tcatcaatcg tagaggcagc cgaaaagaaa ataagatcgt caagtgtcta tgaggacaac 961 tgaaagaatt ttgttttttt tttttgggcc gtggctccaa ctgcccacag gagcaagtga 1021 gacggcagta gacagagtgc gacagagaga gggcgataca gatgtgcgag cggcggaatc 1081 cggactccgg ggggttgaga cggtgaaggt gagcaggtga aggtgcccag aaggacgcag 1141 gacgacgaag aggaccatgg attggacccg gtggcaaatg gccagagaaa gagctggcaa 1201 ccctggacaa gtcaggaaca accctgggcg caaggattgc gatcgcgaga cccgattgga 1261 gtgtttgccc atttgattcg ttgcggcttc acacgtaggt tctatcagtc agccagtcag 1321 tcagtcagtc aatcagtcag tcagtcagtc agtcacccac tcaataaatc aatcgtgcca 1381 cagtgctcga ttgtcgttgt ccccctcaaa tcatcatcag ttgaaaacag aaatacaata 1441 gcaagcgatc aagacatgca cattactgta aatactcaaa actagtttca taaacaaaaa 1501 accaaggaaa tatacaaaaa cccgaaaacc aaaaagtaaa tataaaaaag tgcagtgttc 1561 agtgttcgac gacaaaggga aaaagagacg gcagaggaaa atcgagtggg gaaaaaccga 1621 aaagtgagag ggcggccgag ggctgccccg caacaactga aaaaccaaaa aaaaaatcga 1681 caacctacaa atcaacaata acaacaacaa cagcataacg cccccaacac tgccaatgcc 1741 attgccatta tcaagaacaa cgttcgttca tcatcgttcg tttagatttg acacaaggta 1801 ctatcacgca aactaaagcc acatcttgtt gcggacaccg ttaagcagta tataagtcgg 1861 gcccaacgca caaccaaaaa gggttctcaa gagcagcaaa atatggagtt tttacgcggc 1921 gtctatgcgt ttatgcaagt gagtagatca tcggtgtctc atgtcaaaat cgattcacct 1981 gtttttcgcc tgcacaccaa cgcaacggtt atattactga tcacattctc gattgctgtg 2041 acgacgcggc agtacgtagg aaatcccata gactgtgtac atacaagaga cattcccgaa 2101 gatgttctca acacatattg ttggatacac tcaacgtata cagtggtcga tgcgtttatg 2161 aagaagcaag gttccgaggt gccttttccc ggagttcaca attcacaggg ccgcgggcct 2221 ctaacaataa agcacacaaa atattatcaa tgggtagcgt ttacactatt ttttcaggca 2281 atcttatttt atacaccaag atggctgtgg aaatcttggg agggtggcaa gattcatgcg 2341 ctcatcatgg acttagacat aggcatttgt tccgaagccg agaaaaaaca aaaaaagaaa 2401 ttacttttag attatttgtg ggaaaattta agatatcaca attggtgggc gtacagatat 2461 tacgtgtgtg agctgctcgc ccttataaat gtgataggtc aaatgtttct tatgaatcga 2521 tttttcgatg gcgaatttat gacatttggc ctggatgtga tagattatat ggagaccgat 2581 caggaagatc gcatggatcc gatgatttac atatttccca gaatgaccaa atgtacattt 2641 tttaaatacg gttcaagtgg ggaggtggag aaacacgacg ccatttgcat tttaccatta 2701 aacgttgtta atgagaagat ttacattttc ctttggtttt ggtttatatt attaacgttt 2761 ctcacattat taacgctaat atacagggtg gttattatat tctctcctcg gatgagggtc 2821 tacttatttc gtatgcgatt taggttagtg cgtcgtgacg ctattgaaat aatcgttcgt 2881 cgttcgaaga tgggcgattg gtttttgttg tatttactag gtgaaaacat agatacagtt 2941 atatttcgtg atgttgtaca ggacttagcg aatcgtttag gacataacca acaccacagg 3001 gtgcctggct tgaaaggtga aatacaggat gcatgatatt gggagtatta gaagcaatac 3061 aaaatgcaat ttgtcgtctc catttgaaaa ccatcgaaat caacaacaat aagtgtcaga 3121 acaacgactc gaaaaacaag actaagaaat gaaaattaca accacaaagg aatctagaga 3181 tcttcgcagc agccgcttca taaacaaact caaaactcaa cacacacacc gctaaaaaat 3241 ctttaaaaaa cgtatctcaa aaatacaacc aaaaaaacta tcgtcagctc gcagtcagtc 3301 atcaaaaatc agcattaaat cagctcagcc atggagacca cgatcgatag tcgatagtcg 3361 atacagcagg aaaagcacac atccaaaaac cacaggagaa atgaacagga aataaatgga 3421 agcggaatga aagcagggag aaatatggaa aaaataggaa aacatcaaca gccacgcaac 3481 gaaaggaatt ttaagtaaat aaaaaaatca aattaacgag aaaatcgata aacgataatg 3541 gacagaggat aacaatcgag gaagacagga tcgccaggcc ggtggcaagt agcgcctgcc 3601 gtcggccagg ggtcacaagg tcacaaggtc actacgtcac aagggatcgc ctgggaaatc 3661 agagtcagcg atcagcgacc catagaaaag ttgccccaag gacaaggtca aagtgtgagg 3721 aaacggaaac ggaagccaca gacagacaca cacacataca cacacacacg acgttacata 3781 cacataacca cgcttacagc gacatcactc atacgccccg tagaacacac acacacatcg 3841 cactttgctt gtcatgcagc gttaactaaa ccaaacatca acaaagtcga gacgacgccc 3901 gcggaaaatt gcatttctgt attaacccaa taaaaaagaa tgaaaaatcg aagatcagca 3961 tcactttcac cgaggagaag cacaggaaac gagatgctac agccacaaca tctgaggtaa 4021 aacaacaaca aaagcaagag acgaagagca gcaaatgaaa gtcaagaaaa tcgcagaagg 4081 aagaggagga aatcgcagag aagagcaaca gtttaattaa attaaattca attcaattaa 4141 attacttatt acaatgatat cttgaagtgt tcatgtattc gaatgtaggt taactaagtc 4201 aagcatacaa ataattctat acatatatgt ataatatata tattatatat atatatagac 4261 aacaacaaac attttttttt ctaactctaa gcatttgtat tacccgctaa acaaatgaac 4321 aaaacaaaac gaaacaaaac aaaagataaa aaacaatgaa aaatcaacca aaaaaaagca 4381 aaccgaaaaa cagaattttt tgtatacaga aatgaaagaa aaaattgagc agatagaata 4441 taataacgat aaagaaaaga gaaaagagaa aagaaaagaa agaaaaaagc cgaggagaaa 4501 cgaacagaaa atatcagtaa atatcaagaa agttcagaaa ataccatacc gaataccgaa 4561 aaaaaccgaa aacaaaagat acatttacat agtttattta gaagaaacta tagcgcgcat 4621 cattatataa ccgaaaatcg aagatcgaaa aactgaaaag ggaaaactga aaaccgaccc 4681 aactcacaaa aaacaaagac aaacagacag acggaaatgt tttaagctca cccacacaca 4741 gacactctca cacacacaca tatagcatgt aaagcatata tatatatata aatttatcga 4801 tcgatcattc agcaaagaga agaagaagag cagccaacat tcgcagcata aatcaattaa 4861 ctccactaat aatagagcat actcaactct ctcaactctc tctctctctc tacgaaaaat 4921 acgcctagta ctcagaagcg gaaaatgcga aaattgccca ggaaaactca aaagcacacg 4981 ctttgccaca tgaatcaagt gtaaacataa cgataataat gatataatac cgctagcgaa 5041 taaagtccca aaaatcgaga ggttctaaga tcagatgtgg gagattcccc agttcgacag 5101 tcagtatgta tgtgtgggca ttgcaggtgg cctacagtga agccttccta aatgagaccc 5161 atccgaaggt tagtcttcac cccgaaccac aaagtcatca tcataacaat atgtgctaca 5221 aatcgtaata tccgtccaga aaaccttttg aagcgcacct ctcttgagtt tttatatccg 5281 atctctctgt ctctcttttg gatccccgat ccatccgact tccgtataac ccaaagaaat 5341 ggaccaacac cttgcctttt tcccatctct caaaggacga ccaaaaaaat acaatacaca 5401 gccagaaaaa gccaagccag agatctaata aatctaacaa caaatgtcac tgccaacaaa 5461 accagttaaa aagtaaaatc aagtaaaaaa tagttaaaat gtaaatggga gaggttcttg 5521 aagggtttta gataggttct ttcgtgggtt tcccaccctg caatgcccaa aagtacacag 5581 tgaacccaga aacagaaaca gaaacatgga tagcaaaagg aatttacccc agaagaagat 5641 tgttcctgaa ccaggaattg ccgaaaatcc tgctcattcc tttcgggaat cacttttcga 5701 tttcgaatca tctgaatatg attatgattc tgatttgagc gcttctttcc gtctactcac 5761 actactcagc atactcagca aggacgcatt acgatttaga gggagtgaaa agtgaaagtt 5821 gaagagaagg ttaaagagaa ggtgaaggtg ggagaaagtg ggggtaaggt tgaagcgaaa 5881 aaacaataaa tgtaacaata aatggtaata agtaatttta gcgtacgtct ttttttttaa 5941 cagcttatag ccaactaagt gaagtaattg taattctagt tcaaactgaa ccatttttgt 6001 ctgcgttttt ttttgtcgtg gattcgtagg ttaagtcaca cacacactca tgcagcatac 6061 acacacacac acaacacaca aagaaaacgg taaacgaaaa gcaaaatgta taaatatcga 6121 ggatacttac actgtaatta tagggggcga attaagaagg aataccatac caaaacgtaa 6181 gcatattaca aggaaattgc cattagtcga tattgttaaa gcgatacgta tatgatctac 6241 aatgctaggc taatgaaaaa ccaaaaaaaa gaaagaggaa ggaaaggaat acttagtgta 6301 gctcaagatg gaatctctcg tatctcgtaa ctcgtaactc caactaaaag caattgtaaa 6361 atatcgtaac agatctgaag gcgatcgaac aaacaaacaa aagcaaatgc aaacgaacaa 6421 aacgaacgca agactttatt tttcaaagtg tttgccgcaa tataaaataa taatataata 6481 taatatgtaa tgataactcg aagaattcga aatgtactag ctgaatgtag aggttaagaa 6541 ggacatttca tagacgcaat cctagaagca ataagcacgg gccgaaacgg aaatgaaaag 6601 cagaaacgga agcggaaaag gaaacgaaaa aggaaacgga aacaggcaga gctaacgata 6661 acatcgatga cttttcacca cgtttcacca cttccggtac agttatgtcc acttctcacc 6721 acaccgcacg gcacttctct ctctctctct ctctctctct ctctctctat cacacaccct 6781 cttatcccgt ctcttttcca ctgaaaaacc cttttcacac tccatatagc ctgtttccac 6841 tacaaatagc ggtggagaca ggctatcatt cttgtatgac ctgttttaaa aattccaaaa 6901 aaagtaacct ggaatattct gtattcgaat ctcaattaat atttgtgttt gtttgttcat 6961 ttgtttgtcc atttgtttgt tggtttgttc ccggtctgaa tcggaatctg aattcggttt 7021 ctgccatatt gtttgtgtat aattattatg tattctttgg tggctaagtt aaggctttag 7081 ttctgtaact tctaccgtac tttctcactc atttgttctt tcgtgcaata aaaacgagac 7141 ttgtatacat atca