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LOCUS XM_070218362 4696 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218362 VERSION XM_070218362.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4696 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4696 /gene="spdi" /note="split discs; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058175" CDS 563..3934 /gene="spdi" /codon_start=1 /product="cytospin-A" /protein_id="XP_070074463.1" /db_xref="GeneID:108058175" /translation="MIKLKSLFRRGQGTSSSNSSNSSHKQQQHSSNNNRQKSQSSTSL NTAHEQQQQQQQQQQQQQQHNNTAATTKFYAHQEAASYERGVDVGDEEALLLTNQQQQ QRRQQQQQLQQQQQQQQQQLQSNTLPQKKSKLKGQKQPKQLPVQQQHSNAAELQQQQQ QQPLMTSLAAVPQAAATNNSGSSNINNNNALAALQDGGAAAAAAAGFYQQLAAAASAT SANGSNTSADSPANAFPAAAAAVAVAAVAASSYQQQQQQQQQQQQQQQQQQLINNEQQ QQQLLEANNKMQELHKQLERLGSEQLQLETRITELLPYQSEVAKLKGDLVKMQSLQEK TQMEIGNLKYENESLRNRLRDVVNSPLSDAEKHQIIQDSQRLHSSAPASIALPSTNDG HDGTPCLTPDWDKQSSSSEISVACLQDKIIQMEETHYSTNEELQATLQELADLQTQLT DTQTENVRLAEDKDVLFQSLCRQTEKLNESRTQISTLKELLLRDTKQAASEVSASERE QKLLDLIKTSQEEREAVLLKQEEMGAELAELKQAREAGQQEQQRQRERIALLDSQLDA ANAERRQGEAQFSQAKDEISQRAIEISRLSTLLENARSKIEELEADLARGDKTDLSDV LDVARKEKDALEERVAELQDQCSRSQAELRRLREQLSGLTEECKVAKNNAKCAVSHLE YRLEQLQRDKDKIAGEWQALEERVAELQVQCKCHQEDKAQLQSLLSETQRHLGDVQLQ LNESECRLDQETQQRRREAEEWQQFQADLLMTVRVANDFKTEALSAREQLVLDNKTQK EKIRLLEQQLEKLTKQQLPQSETPQSVLSTVQREMEMATRRSKLSFSRQDSRLSVKTL IESIENNKAQGKADEAESHYSSTSSLNSGTPELGTTPIIFPPSSDWHESLRLPVLQSS NLHVNVGGNQGGSAGNGGGGSASTTKATLPLRDQQQQQQQTAITTPQSAIQSQIQNAS QPSTPATPSSAGSSSSSGLPFGNVSKSFIGGERKDPLNMLAKNGGSKRNALLKWCQNK TVGYRNIDITNFSSSWNDGLAFCAILHSYLPDRIPYDQLSQANKRRNFSLAFAAAESV GIGTTLNINDMCQIERPDWMQVMSYVTAIYKYFET" misc_feature <1409..2995 /gene="spdi" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3593..3928 /gene="spdi" /note="calponin homology (CH) domain found in the cytospin family; Region: CH_CYTS; cd21199" /db_xref="CDD:409048" misc_feature order(3617..3619,3629..3631,3779..3781,3785..3790, 3797..3802,3806..3808,3830..3856,3878..3880,3884..3889, 3893..3898,3905..3910,3917..3919) /gene="spdi" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409048" polyA_site 4696 /gene="spdi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgcgtttg cagaaagcag aaacagaaaa cgcgcgtcgc tttgtgccag ttcgtttgct 61 tagtgccgtg ttcccctcga ttttcctaat ctacctttaa tttttttgta ttactgtctt 121 cccccccgaa ctctgtgcaa cattaaagaa agcagagcaa attgagttga taaaagcatt 181 atgataacaa gcatgtacaa aataactagc aaagcgcgat aaccgataac cgaacgataa 241 acgaacactg cgaaaaatta ccttcaaaca ataataaaaa ataaaaaaaa acgacaacta 301 cattccgaga aatataaaac atagtaaaca aaatgcatca taaatgacgc attacaaaaa 361 agataaaaaa ccaaaaacat cactgataaa aaagttcagg gttcaatccc agtcgaaagt 421 cagtacaccg actataaata aaatgcacca tgcataatct taaataaccg aacaagaaat 481 tacacagaaa agaataagag aaattttaaa gttggcccgt tgatggttta cgttttgcaa 541 cgagaaagga taatccgaca agatgatcaa actgaaatcc ttgttccgca gaggacaggg 601 cacctccagc tccaattcct cgaattcgtc gcacaaacag cagcagcact cctccaacaa 661 caatcgccaa aagtcgcagt cgagcacctc attgaatacc gcccacgagc agcagcagca 721 gcagcaacaa cagcagcaac agcagcagca acacaacaac accgcagcaa caacaaaatt 781 ctacgcccac caggaggcgg ccagctacga aaggggtgtg gatgtgggcg atgaggaggc 841 gctgctgctg acaaaccaac agcagcaaca gcggcgacaa cagcaacagc agttgcaaca 901 gcagcagcag cagcagcagc agcagctaca gagcaacacc ttgccccaaa agaaatccaa 961 gctcaaggga caaaagcagc caaaacaatt gccagtgcag cagcaacaca gcaatgcagc 1021 tgagctacag cagcaacagc aacagcaacc actgatgact tccctggcag ccgtgccgca 1081 ggcagcagca actaacaaca gcggcagcag caacatcaac aacaacaacg cattggccgc 1141 actgcaagat ggtggcgctg ctgccgccgc tgcagcaggt ttctatcagc aactagctgc 1201 agcagcatca gcaacatcgg ccaacggcag caacaccagt gccgatagtc cagccaacgc 1261 ttttcccgca gcagcagcag ccgttgctgt tgccgctgtg gcagccagca gctaccagca 1321 gcagcaacaa cagcaacagc agcaacaaca gcagcagcaa cagcagcaac ttatcaacaa 1381 cgaacagcag caacagcaac tcttagaggc taacaacaaa atgcaggagc tgcacaagca 1441 gctggagaga ttgggaagcg agcaactgca gctggagaca cgcatcacgg agctcctgcc 1501 ataccaaagc gaggtggcca aactgaaggg cgatctggtt aagatgcaga gtctacagga 1561 aaagacccag atggagattg gcaacctgaa atacgagaac gaatctctgc gcaatcggct 1621 gcgggacgtt gtaaactcac cgctttcgga tgcggagaag caccagatca tccaagactc 1681 gcagcggctg cacagttcgg cgcccgcctc gatagccctg cccagtacaa acgatggaca 1741 tgatggcaca ccctgcctca cgcccgactg ggacaagcag tcatcctcca gcgagatctc 1801 tgtagcctgc ctgcaggaca agatcattca aatggaggag acgcattact cgaccaacga 1861 ggagctgcag gcgacgctgc aggaattggc cgacttgcag acccagctga cggacacgca 1921 gacggagaat gtgcgcctcg ccgaggacaa ggatgtgctc ttccagtcgc tctgccggca 1981 gaccgagaag ctgaacgaat cgcgcacgca gataagcaca ctaaaggagc ttctcctgcg 2041 ggacaccaag caggctgcct ccgaggtcag tgcctcggag cgggagcaga agcttctgga 2101 tctgatcaag acatcgcagg aggagcgcga ggccgtgctg ctcaagcagg aggaaatggg 2161 cgctgagctg gccgagctga agcaggcgcg cgaagctggc cagcaggagc agcagcgtca 2221 gagggagagg attgcgctgc tcgactcgca gttggatgca gccaatgcgg agcggcggca 2281 gggagaggct cagttctcgc aggccaagga cgagatctcg cagcgagcca tcgaaataag 2341 tcgattgagc actctcctag agaatgctcg ctcgaagatc gaggagctgg aagccgattt 2401 ggccagaggc gataagacag acctgagcga tgtcctcgat gtggcccgca aggagaagga 2461 tgccctggag gagcgtgtgg ccgagctgca ggatcagtgt tcgcgcagtc aggccgagct 2521 aagaaggcta cgcgaacagc tctccgggct gacagaggag tgcaaggtgg ccaagaataa 2581 tgccaagtgc gccgtctccc atctcgaata tcgcttggag cagctgcaaa gggataagga 2641 caagatagcc ggcgaatggc aggcgctgga ggagcgagtg gccgagctgc aggtgcagtg 2701 caagtgtcac caggaggaca aggcccagct gcagtcgctg ctaagcgaaa cccagcgcca 2761 cctaggcgat gtccagctgc agctaaacga gtccgagtgc cggctcgacc aggagacgca 2821 gcagcggcgc cgggaggccg aggagtggca acagttccag gccgatctcc tcatgaccgt 2881 gcgcgtggcc aatgacttca agactgaggc gctcagcgcc cgggagcagc tggtgctcga 2941 caacaagacg cagaaggaga agatcagact gctagagcag cagctcgaga agctcactaa 3001 gcagcaactg ccgcagtcgg agactccgca gtcggtgctg tccactgtcc agcgcgagat 3061 ggagatggcc acgcggcgca gtaagctgag cttcagccga caggactcgc gactctccgt 3121 caaaacgctt atcgagagca tcgagaacaa caaggcgcaa ggcaaagccg acgaggcgga 3181 atcccactac agctccacgt ccagcctaaa cagcggcact ccggagctgg gcaccacgcc 3241 cattatcttt cccccctcca gtgattggca tgaaagcctt cgcctgcctg tgctgcagag 3301 cagcaatctg cacgtgaatg tgggcggcaa tcaaggagga tcagctggca atggaggagg 3361 aggatcagct agcactacca aagccacatt gccgctgcgg gatcaacagc agcagcagca 3421 gcagactgcg ataacaacgc cacagagtgc gatacagtcc cagatccaga atgcctccca 3481 gccctcgacg ccggccacgc ccagcagtgc cggcagcagc agcagcagtg ggctgccctt 3541 tggcaatgtc tcaaagtcct ttatcggcgg tgaacgcaag gatccactga acatgctggc 3601 gaagaacggc gggtcgaagc gcaacgccct gctgaagtgg tgccagaaca agacggtggg 3661 ctatcgcaac attgacatca ccaacttcag ctcgtcgtgg aacgatggct tggccttctg 3721 cgcgatcctg cactcgtact tgccggaccg cattccctac gatcaactga gtcaggccaa 3781 caagcggcgc aacttttcgc tggcattcgc ggctgccgag tctgtgggaa ttggcaccac 3841 cctgaacatt aatgacatgt gtcagattga acgacccgac tggatgcagg tgatgtccta 3901 tgtgacggct atctacaagt actttgagac ctagagagga actcgaggag catttgctgc 3961 cctccacttg ggctcctttg tgtagtagtt gtgtagggtt cgctttattt tcaatataca 4021 atttttgttt ttttttcctt ataaatactt tttttttttt ggttgttgtg tatattcagc 4081 atttccagga tggacagcaa agaaatcttt taacctagct tgtacgcttt ttttttctct 4141 tctagttttc tcaaaaaccc ctctctctgt tttagtgtgt ctacttctgc gtccatgttc 4201 ttgcccgtgt acagtggcca ctcaatggca acgcttctgt aaaatgcatt tgtttgtttt 4261 tcggttttac agacgacccc ttagcactaa gtttaagctt aaagtttaat tttaatggag 4321 cttcgaaggt tgttcaggtc catcaatcca gaggacaacg aagactcgcc cagccgtgtg 4381 tccactgtac atggataagg tagtttatta tttcgttttt tttttctatt gcctggtaca 4441 gagtttattt ttacacgcaa atcgatgatg gaggataaat tagcttgatt agctttgcga 4501 cgaagcatat aactatagag ataataagag gagatggtcc ggactttagc tttagcttat 4561 ctatatataa ttatttattc caactacatc agatcactaa tttaaacgca aacaaaatgt 4621 atttttttca acgattaatt ctacgatcta cccataaaga gcaaaaacgc tgcgaaaggc 4681 agtgaaacaa gtaaaa