Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218361 5807 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218361 VERSION XM_070218361.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5807 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5807 /gene="rudhira" /note="rudhira; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070137" CDS 1320..4628 /gene="rudhira" /codon_start=1 /product="breast carcinoma-amplified sequence 3 homolog isoform X2" /protein_id="XP_070074462.1" /db_xref="GeneID:108070137" /translation="MSADSPRRHPSGVVGSGLGSTSGSISGSGSAGGSSKSGTAVPAI VPPQTVSDRSILDSAIGFINDVTLANQPVQDPKDTITWARFETCADVSDPRFGDDWEL EGNAAPPLLLILGYGLGVQVWAIPANGEAVEVLSWRHGVVTALRVLPTPATAAALDEN GRADEPVDAFAEKRPLVAFVDGGSAAASGLLSGNPGLGLGGGGGGGGIPTVGGSVGGA GVSAAAQFSAVNFMSLKTGVQVKTIKFKNAVLDIQANRSAVVITFHERIAVFDARTLE DRLTITTCYPSPGINPNPIALGPRWLAYAEHKLLHSKRSGGGCDGEGVPSYTATVLNA AKSLGKGLRELGEQVAAGLTGTTAGSAGSSKSSSFDSASGGPDAKQSGVVTIIDVKHP VKDYSPTSGTPLSSTGGSQGGGDPIVAHFVAHSEALVALEFDSSGMLLLTADRRGHDF HVFRIQPHPVGPSLAAVHHLYVLHRGDTSAKVQHIAFSLDSRWAAVSTLRGTTHVFPI TPYGGAMGVRTHTSLHVVNKLSRFHRSAGLGADGRSSSPISHSESTTFVQSLQPYHNP TLPPYPRPSVVQPLAQLRQPFTLGSPPGSAGLGGGGGVGGGGGMSSGVSSVGHGGVGV GSSSQRQRQRLSSLSDDSGKPLSVCSIFAKSRSWLLEPPMATREQPHRVQRKAVDSLF VMAGHGALIQYDLDTKLASHVAKEKICDDTPIELEVEARAQWNLGRRKDGSQEIAPPL TLDNWLIKDRHGSLLQDSTHHFDEPDERAESWLAQVEIITHAGPHRRLWMGPQFVFKN YNTPSGSNLNHVDAEAVEIGVTKTTTTTLPSTAAASSVLGGGKDRSSPLNMPLNAATS VGGSGIGSSAVTGRSGAGVPVLIESGSYSSIEQSPKLMDRFRHGHLDSDYGHGDTRLK EDLADAMRESPSTAAARRETSGTYFTTDQLDGLAHNNNNNINNNIIPTKGNTMNPNAM PNNKGQQKPEVTDAGDYPIRHSFGDHGELSTVVNIEVFDDQLSLSSISTNSRLSLEGP PSQSSPPLSLTNGQLMDTNLMHFSESATATGVPQRGGGGGGGARFEVDREDDDDEEAE EDEREDRQLGRRNL" misc_feature 3219..3770 /gene="rudhira" /note="Breast carcinoma amplified sequence 3; Region: BCAS3; pfam12490" /db_xref="CDD:463605" polyA_site 5807 /gene="rudhira" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cacctctagc cagaagagag acaaaaaaca gagacagaaa cagcgcagca accaaaataa 61 taacaattaa taatactaag tgtccgctaa cgatattacc cgaataaagg caggcgctcg 121 ctagcagttt ttgaccagct agcactagtt ttttttcctt ttcgttttgg cagcagtctc 181 tcttggttat tttctgtttt ttttttctgt tgcgacgcat aaatcgtctt taatcgatac 241 acatatatat atatatataa gttaacggga gagtacaaca acaacaaggc cagcgattgc 301 agatttaatg tcgcagttac tttttgtgca gcaacaacaa caaacacagt ggcagtcggc 361 agcacaacag caacaataac aaaatcataa tcgaaaaacg acgaaaaaga agtagaaaaa 421 aataaaacgt acgacgcagc gcagtcgttg tgtctgtatt ggtgcgtgtg cgtgtgtgtg 481 tgtgagtgcg agtgagccag caatagggct ctgcgtcgac ggcggcagcg gcagaagaag 541 aagaagcagc aaaaagttca gttttttcaa acaaaacccg agctccgcag ttgagaactt 601 gctgcgcgtt tcgaggagag ctattaatta attagtagaa gcccaaaaat taagcacccg 661 cacttggagg gcgtggcaaa acaacaaaaa accagaaaat aaaggggggc ggatagaaag 721 agaggggaaa agcaagacgc agtttggaga cttgactttt ttgttgctgc tgctgccgcc 781 tgcaacaaac gaagataata aaaaagagga gctcgaaaac aacaacaaca agaagaacac 841 accaaaaagg aaatcaacaa caaaagcttg agcaagagag agcgagagag acatagagag 901 agagcgagca gctaaaaaca tatgattttt gtttgtgttg ttgtttttgc gcgcgctctg 961 cggaacgtgt gagaaaagtg gaacgagcga atgtgtttca gctgctgctg attcagattc 1021 aaccaacgaa cagcaacaac aacgcaagtg ttgacaacaa gagagagcca acgagagaca 1081 gagagcgaga gagtgagcgg gagcgaaaga gcaggggaaa gcaagaaccg atcagacgca 1141 gtgtctccag tagcatatac ccactgccca ctgccagccc caccccgccc ctctgtccac 1201 tgaccagtcc agtgtggagg cactgcatca ttggcagcag ctgtggtagc agctagaaga 1261 ggaggagcga ttccaggagc ggccatctcc ccccctcccg cagccgtcgt cgtcgcatca 1321 tgtccgcgga ttcgccacgc cgccatccct caggcgtggt cggttccggt ttgggctcca 1381 catccggatc catttccggt tccggctccg ctggaggcag cagcaaatcc ggcaccgccg 1441 tacccgccat tgtgccaccg caaacagtct cggatcgctc gattctcgac tcggccattg 1501 gcttcatcaa cgatgtgact ttggccaacc agccggtgca ggatcccaag gacaccatca 1561 cctgggcccg cttcgaaacg tgtgcggatg tcagcgatcc gcgtttcggt gacgactggg 1621 aactggaggg caatgcggcg ccgccactgc tcctcatcct cggctacggc ctgggcgtcc 1681 aggtgtgggc catcccagcg aatggcgaag cggttgaggt gctatcctgg cgtcacggcg 1741 tcgtcactgc cctccgggtg ctgcccacgc cggccacggc cgccgctctg gacgagaatg 1801 gccgggcgga cgagccggtg gatgcctttg ccgagaagcg tcccctggtg gcgttcgtcg 1861 atggaggcag tgcagcggcg agtggtttac tttccggcaa tccaggattg ggtttgggcg 1921 gaggcggcgg tggcggtgga atccccacag ttggcggatc cgttggagga gctggcgttt 1981 cggctgccgc ccaattcagt gccgtgaact tcatgtccct caaaacgggc gtccaggtga 2041 agacgatcaa gttcaagaac gccgtgctgg acattcaggc caatcgatcg gcggtggtca 2101 tcacgttcca cgaacggatc gccgtcttcg atgcgcgaac gctggaggac cgcctcacca 2161 tcaccacctg ctatcccagt ccggggatca atcccaatcc cattgctttg ggaccgcgct 2221 ggctggccta tgcggagcac aagttgctgc actccaagcg cagcggcggc ggctgcgatg 2281 gcgagggcgt tcccagctac acggccaccg tgctcaatgc ggccaaatct ttgggcaagg 2341 gtctgcggga gctgggcgag caggtggccg ccggactgac gggcaccacc gccggcagcg 2401 ccggcagctc caagagcagc agcttcgact cggccagcgg cggtccggat gccaagcaat 2461 cgggtgtggt caccattatc gatgtgaagc atcctgttaa ggactacagt cccacgtcgg 2521 gcactccgct gagctccacg ggcggctcgc agggcggcgg cgatcccatc gttgcccact 2581 ttgtggccca cagcgaggct ctggtggccc tggagtttga cagctccggc atgctgctcc 2641 tgaccgccga tcggcggggc cacgacttcc atgtgttccg cattcagccg catcccgttg 2701 gccccagcct ggccgccgtc caccatctgt acgtgctgca tcgcggcgat acgagcgcca 2761 aggtgcagca catcgccttc tcgctggact cgcgctgggc tgccgtgtcc acgctgcgcg 2821 gcaccaccca cgtcttcccc atcacgccct acggcggcgc catgggcgtt cgcacgcaca 2881 cctcgctgca tgtggtcaac aagctgtcgc gcttccatcg cagtgccggt ttgggcgccg 2941 acgggcgctc cagttcgccc atttcgcact cggagagcac gacgtttgtg cagtcgctgc 3001 agccgtatca caatcccacc ctgccgccgt atccgcggcc gtcggtggtg cagccactgg 3061 cccagctgcg tcagcccttc acgctcggct cgccgccagg atcggcgggc ctgggcggtg 3121 gtggtggcgt gggcggcggc ggtggcatga gcagcggagt gagttccgtt ggccacggag 3181 gcgttggcgt gggcagcagc agccaaaggc agcgacagcg gctctcctcg ctgtccgatg 3241 acagcgggaa accactgagc gtctgctcca ttttcgccaa atcgcgctcc tggctgctgg 3301 agccaccgat ggcgacacga gagcagccgc atcgcgtcca gcgcaaggcg gtggactcgc 3361 tcttcgtgat ggccggacac ggggcgctca tccagtacga tctggacaca aagctagcct 3421 cacatgttgc caaagagaag atttgtgatg acacgcccat cgagctggag gtggaggccc 3481 gcgcccagtg gaatctgggg cggcgcaagg atggatctca agaaatcgca ccaccgctga 3541 cgctggacaa ctggctgatc aaggatcgcc atggcagcct gctgcaggac agcacccatc 3601 atttcgacga gccggacgag cgggccgaga gctggctggc gcaggtggag atcatcacgc 3661 acgcgggtcc gcaccgccgg ctgtggatgg gtccgcagtt tgtcttcaag aactacaata 3721 cgcccagcgg ttcaaatctg aaccatgtcg atgcagaggc ggtggagatt ggcgtcacca 3781 agacgacgac caccacgctg ccctcgacgg cagccgcttc gtcggttttg ggaggcggca 3841 aggatcgctc cagtccgctg aacatgccgc tgaatgcagc cacttcggtg ggaggatcgg 3901 gcatcggcag ctcagcggtg acgggacgca gcggtgccgg agtaccggtt ctaatcgaat 3961 ccggatcata cagcagcatt gagcagagtc ccaagttaat ggatcgcttc cggcatggtc 4021 acctggattc ggactacggc catggcgaca ctcgtcttaa ggaggatctg gcggatgcca 4081 tgcgagagtc cccatccacg gcggcggcgc gacgtgagac ttcgggcacc tattttacca 4141 cggatcagct ggatggcttg gcccacaaca acaacaacaa catcaacaac aacataatcc 4201 caaccaaagg caacacgatg aatcccaatg cgatgccgaa caacaagggc caacagaagc 4261 cggaggtcac agatgccggg gactatccca ttcgccattc gttcggcgat cacggcgaac 4321 tctcgacggt ggtcaacatc gaggtgttcg acgatcagtt gagcctgagc agcatcagca 4381 ccaacagtcg cctctcgctg gagggaccgc cgtcgcaatc gtcgcctcca ctcagcctga 4441 ccaacggcca actgatggac accaatctga tgcacttcag cgagagtgcg actgccactg 4501 gagtgccgca gagaggcggc ggcggtggtg gaggagcccg tttcgaggtg gatagagagg 4561 acgatgacga cgaggaggcg gaggaggatg agcgggagga tcgccaactg ggccggcgga 4621 atttgtgaga gttaatgcag agggcgggcc tcctgggcgg ccagctccag ttgcgacgca 4681 tctgcgccca gctcttcagt ccgcgcgccg tcgaggatcc ctagacttag cttttggtgc 4741 ttgctctacc cattctctgt atctgtatct ccatgggcct ctgcctcggt attcgtatct 4801 gtatctgtgt ctctgacgag ctattgtagt ttaattttgt ctgttttgtt aagtccaagt 4861 agtcgatagt tgatatccgg aagcgttcct gcagccatct ttttttgatt tttacaaaac 4921 cacacaaagc cccgcccttg aaaaaaaaaa actaaaatgt gaaatgccaa tgcaataaaa 4981 aagtaaacaa attcgtgtga aaagatatat aagcataaga aatagatcag atcagacctc 5041 agctgaatgc cgtgatattt aaaataaaat tataaaaaaa aaaaaaacaa agtaaatgaa 5101 agaggagcgt agaacgaacg agaggcgaaa tacaatacaa tattaaaaat atatatatat 5161 atatctagag atcgaaaggc gcataaagca aacacaatga accacaaaat atgaaatatg 5221 taatagcata gaaactccat ctacttaccc tagactaaag aagaaaaagc tccttaagcc 5281 caaattcgag aaagttttca ccttctttcg atttgattat ttttccaatt tttttgtacc 5341 ttaattaagt aggaatttag ttttgtatac ttttctatgt aaaccaatga agtccagttc 5401 aatgggaatg atttaatatt aaacaattat tatgtgtaca cagacctcct ctcccacagt 5461 tgtgaaatcc cctaacattt agctacctgt aaagctaacg aattccaagt cttaattctg 5521 ccttcagcat tcacactttt gttagttctt cgattctaaa gcaagaattc attccaaaat 5581 acgaaatcaa aagctcacac gcaaacctta acgtagaatc agtaatgaag ttgccgaaat 5641 agatgagaaa aatgaaacat atccatttac agatataaat actaattata gtataaatat 5701 tattcccaca ttggtgcatt atcgacatcc caaaacaaaa gtcttaagaa aacagttcaa 5761 acttcatggc gaaacatgca taaatatata tttttataaa cgttgaa