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LOCUS XM_070218355 5703 bp mRNA linear INV 09-DEC-2024 (IntS6), transcript variant X2, mRNA. ACCESSION XM_070218355 VERSION XM_070218355.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5703 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5703 /gene="IntS6" /note="integrator complex subunit 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108065625" CDS 577..4407 /gene="IntS6" /codon_start=1 /product="integrator complex subunit 6" /protein_id="XP_070074456.1" /db_xref="GeneID:108065625" /translation="MTIILFLVDTSSSMCQKAYVNGVQKTYLDIAKGAVETFLKYRQR TQDCLGDRYMLLTFEEPPANVKAGWKENHATFMNELKNLQSHGLTSMGESLRNAFDLL NLNRMQSGIDTYGQGRCPFYLEPSVIIVITDGGRYSYRNGVHQEIILPLSNQIPGTKF TKEPFRWDQRLFSLVLRMPGNKIDERVDGKVPHDDSPIERMCEVTGGRSYRVRSHYVL NQCIESLVQKVQPGVVLQFEPLLPKEAATAGGASAGTSAISILAAGISGIASGAPEPP PDIVFQPVKKMIYVQKHITQKTFPIGYWPLPEPYWPDSKAITLPPRDAHPKLKILTPA VDEPQLVRSFPVDKYEIEGCPLTLQILNKREMNKCWQVIVTNGMHGFELPFGYLKAAP NFSQVHLYVLAYNYPALLPILHDLIHKYNMSPPNDLMYKFNAYVRSIPPYYCPFLRKA LVNINVPYQLLQFLLPENVDNYLSPTIANQLKHIKNTAKQDQENLCLKVYKQLKQPKP PYRQVETAKLCTGAALRRDLVRHPLLRDTFAKLHAEIEPVENYTIVVPQLTHQSSAKT YRNPFDIPRRDLVEEIARMRETFLRPASLVAKDSGHCLPIAEMGNYQEYLKNKDNPLR EIEPTNVRQHMFGNPYKKDKHMVMVDEADLSDVAPMKSPNGNGPGGAAGSPAAGGSGT SSPGSSPGGGGSSGPGMPGMGGGISGLMLGAGGSGGSSKKLDGTARGRKRKAGPLPRA FEFRRMSTDSRSSCSSAVSSVSTTGSAPGSPIPGATSSVVLGCDSSGGLESGSPNATC FDEDSNSNSSFVSSTSEASSSDSGMSGMSDRLGIGFDFNEEETSDQDTPLNGYVHNFI NGISDDATAGETEAVPGGTLPVASASPVSETTVGTLQVVTAAIPAGAAVAAAASVIPA SNGGEVCASSSSSSISCSSSSSPGVLYVPLNGLTTHAAYSSNLGNLDNNLSSGATGLL SLSKPGSLPLANGYGNAHSSSVISPPSPLSLVPPAPIASSSSSSSSSTSAYFSHNDIN DASEISRILQTCHNGTSGGSGSVAGTTSSNLNGNGSAESAGGAASSAEDHNSLLSFDA LKRNAGLVAGNPHYYWASGLNHHNNNNSSAASVMANNHNHRSSPCKLEVKSSGSGSSC GSSPTHSNNNGGMSSPVAVSSSSSLLLPLSEEQREAARQHNIELRLQIFRDIRRPGRD YSQLLEHMNLVKGDHEMQSDFVEMCIGESLRFRRHRMVSSLQEWWDRKQAAATGGGGG GVASTGAEQAVAKS" misc_feature 586..969 /gene="IntS6" /note="von Willebrand factor type A domain; Region: VWA_2; pfam13519" /db_xref="CDD:463909" misc_feature 4129..4314 /gene="IntS6" /note="INTS6/SAGE1/DDX26B/CT45 C-terminus; Region: INT_SG_DDX_CT_C; pfam15300" /db_xref="CDD:464626" polyA_site 5703 /gene="IntS6" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cccgcgcggt ggtgataaat ttctgttggc acaaagtaaa aatataacag aataaaaaat 61 cgtggcgcgg catataggag ctaatcgaaa attattgcaa gtattgggcg gagagaggcg 121 ttcatttggt ggcgagtgtg ttttttgttg ttgttttccc cccctcggaa accctcgcct 181 gaagatgctg ccggtgtaac tgtgtttcgt tgttgttgtt gtttatccag tccaaatgtc 241 agctgtttca cgcaacatgt accataaaag cggaacagcg aaacgcagaa aaagagcaaa 301 tcgatcaagc ccaggacaag aacaacaaaa gcaagagaat cagcagaagc agaagcagca 361 acaacaagca gaggaagaga gctgctaaca acgtaaacaa aaactgagca cacatacaca 421 caaagggaga tagcaaccac aataagaaga aagagagcga gggaaagagc aggagaaagt 481 gcaaccgagc tcggtgaaaa gagaaagaga gagagagaga gagaaaggaa gatcatcgat 541 aacagataaa gatatcagag aggaacaacc accgccatga ccatcatact cttcctggtg 601 gacacctcgt cgtccatgtg ccagaaggcg tatgtgaatg gggtgcagaa gacgtatctg 661 gacattgcca agggcgccgt ggagacgttc ctgaagtatc gccagcggac gcaggactgc 721 ctgggcgatc gctacatgct gctgacgttc gaggagccgc cggcgaatgt gaaggccggc 781 tggaaggaga accatgcgac gttcatgaac gagctgaaga acctgcagag ccacggcctc 841 acctcgatgg gtgaatcgct gcgcaacgcc ttcgatctgc tcaatctgaa ccggatgcag 901 tcgggcattg atacgtatgg ccagggtaga tgtcccttct acctggaacc ctcggtcatc 961 attgtgatta cggacggcgg acggtattcg taccggaacg gtgtccacca ggagatcata 1021 ctgccgctga gcaatcaaat accgggcaca aagttcacca aggagccctt tcgctgggat 1081 cagcgcctct tctcgctggt cctccggatg ccgggcaata agattgacga acgcgtggat 1141 ggcaaggtgc cgcacgatga ttcgcccatc gagaggatgt gcgaggtgac gggcggccgt 1201 tcgtatcgcg ttcgcagtca ctatgtgctg aatcagtgca tcgagagtct ggtgcagaag 1261 gttcagcctg gtgtggtgct gcagtttgag ccgctgctgc cgaaggaggc ggcaaccgct 1321 ggcggcgcat cggcgggaac gagcgccata tccatattag ccgcgggaat atcgggaata 1381 gcatcgggag ccccggagcc gccgcccgac attgtcttcc agccggtgaa gaagatgatc 1441 tatgtgcaga agcacataac gcaaaagacc ttccccattg gctattggcc gctgccggag 1501 ccttattggc cagattcgaa ggcaataacg ctgccgccgc gcgacgcaca tcccaagctg 1561 aagatcctca cgccggcggt ggatgaaccg cagttggtgc gcagttttcc cgtggataaa 1621 tacgaaattg agggatgtcc gctgacgctg cagatcctca acaagcgcga gatgaacaag 1681 tgctggcagg tgattgtcac gaatggaatg cacggcttcg agttgccctt tggttatctc 1741 aaagcggcgc ccaatttctc gcaggtgcat ctctacgttt tggcctacaa ttatcccgcg 1801 ctgctgccca ttctgcacga cctcatccac aagtacaaca tgagtccgcc gaacgatttg 1861 atgtacaaat tcaatgcgta tgtaagatcc atacctccgt attactgccc gtttttacgc 1921 aaagctttgg tcaacatcaa tgtgccgtat cagctgctgc aatttctgct gcccgagaat 1981 gtggacaact atttgtcgcc gacgatcgcc aatcagctga agcacatcaa gaatacggcc 2041 aagcaggatc aggagaatct ctgcctgaag gtctacaagc agttgaagca gccaaagcca 2101 ccgtatcgcc aggtggagac ggctaaactt tgcacgggag ccgcgttgcg aagggatttg 2161 gtgcggcatc cgctgctaag ggatacattt gctaagctgc atgctgaaat tgagcccgtg 2221 gagaattata cgattgtggt gccgcagctg acgcatcaat cgtcggcgaa aacgtatcgc 2281 aatccctttg atataccgcg tcgcgatttg gttgaggaaa tagcgcggat gcgcgagact 2341 ttcctgcgac ccgcctcgct ggtggccaag gattcgggcc actgcctgcc catcgccgag 2401 atgggcaact atcaggagta cctcaagaac aaggacaatc cgctgcggga gattgagccg 2461 acaaatgtgc ggcagcacat gtttggcaat ccctacaaga aggacaagca catggtgatg 2521 gtggacgagg cggatctgag cgatgtggcg ccgatgaagt cgccgaatgg caatggaccg 2581 ggtggagcag caggatcgcc agcagcaggg ggttcgggaa cctcatcgcc gggatcttcg 2641 ccaggtggag gaggttccag tggtccaggg atgcccggaa tgggtggcgg aatatctgga 2701 ttgatgttag gagccggcgg aagtggagga tcctctaaaa aacttgatgg aacggcgagg 2761 gggcgaaaga ggaaggcggg tccgctgccg cgtgcctttg aatttcgtcg catgtccacg 2821 gattcgcggt cttcctgctc cagcgcggta tcctctgtgt ccacaacggg cagtgcgccg 2881 ggttcaccca ttccgggagc cacgtcatct gtagttttgg gatgcgattc ctctggggga 2941 ttagaaagtg ggagtccaaa tgccacttgc ttcgatgagg acagcaatag caacagcagc 3001 tttgtgagct caacttcaga ggcttcttca agtgattccg gaatgtctgg gatgtccgat 3061 cgcttgggca ttggctttga tttcaacgag gaggagacta gcgaccagga cacgccgctc 3121 aatggctatg tgcataattt tatcaatggt ataagcgatg atgcgacagc gggggaaacg 3181 gaggcggttc caggaggcac tttgccagtt gcgagtgcct ctccagttag cgaaacgaca 3241 gttggaactt tacaagttgt tacagcagca ataccagcag gagcagccgt agcagcagca 3301 gcatctgtga tcccggccag caatggcggg gaagtttgcg ccagtagttc cagtagctcc 3361 atcagttgca gctccagttc ctcaccagga gtgctctatg tgccgctcaa cggactaacc 3421 acccatgcgg cctacagcag caatctgggc aatctggaca acaacctgag ctctggagca 3481 acgggattac taagccttag taagccgggt tccctgccct tggccaatgg ctatggaaat 3541 gcgcacagtt catcggtcat ctcgccacca tctcccttgt ctttggtgcc tcctgcgccg 3601 attgccagca gctcaagcag ctccagcagc tccacttccg cctacttcag ccacaatgac 3661 atcaatgatg cctcggagat ctcgcggata ctgcagacgt gtcacaatgg aaccagtgga 3721 ggcagtggaa gcgtagcagg aacaactagc agcaatttaa atggcaatgg aagcgcagag 3781 agtgcaggag gagcagcctc ctccgccgaa gatcacaact cgctgctaag tttcgatgcc 3841 ttgaaacgaa acgcgggact tgtggcgggg aatcctcact attactgggc cagcggactc 3901 aatcatcaca ataataacaa cagcagtgca gcctctgtga tggccaacaa tcacaatcac 3961 cgcagtagtc cctgcaagct ggaagtcaag agcagcggca gcggttccag ctgcggttcc 4021 tcgccgacgc acagcaacaa caacggcggg atgagctcac cggtggcggt atcgtcatca 4081 tcatctttac tactgcccct cagcgaggag caacgcgagg cggccaggca gcacaacatt 4141 gagctgcgac tgcagatctt ccgggatatt cggcgacctg gacgcgacta cagccagctg 4201 ctggagcaca tgaatctggt gaagggcgac catgagatgc agtcggattt cgtggagatg 4261 tgcatcgggg aatcgttgcg ctttcgcagg catcgcatgg tttccagcct gcaggagtgg 4321 tgggatcgca agcaggcggc ggcaactgga ggaggaggag gaggagtagc gagtactgga 4381 gcggagcagg ccgtcgccaa gagttaacga tggctcatgt ggcaccactg agcccgcggg 4441 gtcatccaat ccatctgtct gtgatgtcaa cgaaatcgaa atcgaaaacg aaatcgaaga 4501 gcagcctcgt caatttccaa tatactgtaa ataaatgcca ggacagccag gatcaacgcc 4561 acggggatat agccactata tcgcatacca agcaacaacc agcaaaatca acaaaatgca 4621 gcaacaattc taaagcagag aaaacaccac atttttgcgg gacgatttct tagtatttaa 4681 aaaaaaagaa aagagtttag gagtttttgt agcagcaggc aagatacatg taattactaa 4741 atatatataa atacttaagc tagacgttag ttaatgataa aacttaaaaa aaaacaaaaa 4801 gaaaaaaata gatttttgta gcagccgttt aagttgtatt ttttttttta cctagtaata 4861 cctagtaata cttatacata catatataaa tatatttttc tcttgtactt ctaagaacct 4921 aggaattatt ttaattagac ttttatcaaa ttaagtgtat attgtatgtg tataaaaaaa 4981 aaacgaagag aaagtttagg aaaagcttga gcttattgag cctcacacgt tttagccaat 5041 ttttgttggg cctgtttcaa taacacacac acttcgcttt gattttagcc aaaacgaata 5101 gagaacgtaa aaaagaaaag cactacacac acacatatat atataaatat atagtatatg 5161 tatttattgc ctaaatcggg tcagcgtttc attatctaaa ataaccgtat tattatgttt 5221 cttcggtttc cttcaatcct cattattttt ttttttttgc tcttatttat tgtatacttt 5281 atttaatatc tatacaaatt gtaatgtgag catagcctaa acacacaata attatttgaa 5341 aggcagacaa aacgataagc aaaaaaaaaa aacgtaccgt ttgttataca tatatataaa 5401 aacaagaaaa aagtaataca tttttgcact atttttttac gtgtatgttt gtatgcatga 5461 cctgtgagta attgagtaat aacaacagca gaaaataaaa aaaagatgaa acgtttacta 5521 gtagttaggc ggtgggcagt gattttagta ctgcttcagg attaaataat tatgtacaat 5581 ctagagtgtg cgtatctaac aaatttcata agacatcaac aacagaaaca tcaaaacagc 5641 agtaaaacaa accgaaaaca atacgaaatc aaacgaaaat aaaaagagga gcattgcatt 5701 caa