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LOCUS XM_070218350 2946 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_070218350 VERSION XM_070218350.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2946 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2946 /gene="LOC108054951" /note="forkhead domain 3F; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054951" CDS 97..2373 /gene="LOC108054951" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_070074451.1" /db_xref="GeneID:108054951" /translation="MIVNMPVNGTGSASSPTSNPNPGNNNLNNNNSSTTNQNNSSLPG DYNFLKRKYDDQEDLALGQVYEPIESNPWKKRHLDYDPAGDLQFHLQLEQPASNPNPA VNPAAPAQSQSQSQSQSQSQSSTTSFINDLFAYDSSLLVPTAAYSHCPPSSAPLEDNG GWTGGELLELDHRYNSGLQAELGQLNATLPPPPPATSSSSSQNSAPQQPNPGQNPNHS QNFLVPQKQRLLSAGRRTSSGSQGSGVAHEATEADFEDKNLSWLLNFKFDEFPHLSPH NQVHGQAVNLPEGGAPHPHPPASTAMAISTSPCSSASPTSASVLSAASATNSTHSLGS GMMDQRARSPKSCSSAAMPTSGGGGGGAGGGGCSGVAASPAAGVGSTKTGRKFEELVM EVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYTELIEYALEDKGELTVSGIYQWIS DRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAENVLAWEHK KQRLDLFFKMESINRERIQQHQQQQQLQQQHQQQQQQQHSPQQQQQHQTAQQASSCLY DEAAVAAATLTQEMMQSSGGGNEATQQQHHHSHQNHQSHHHNHHHQRLLPFNDLLSDD ELRKTAGQILNGIHREVEVQSVNSIISTYHDVLLDNEDYLNPIHKDVVVTESVLRQQH GNLGGGSHNHLGGNGHMGSGSGSGSGSSQYYITEIDPMELGIQMSHQVEPSEEEVLFS DEFNLNYFGYNPGSDIVA" misc_feature 1357..1575 /gene="LOC108054951" /note="Forkhead domain; Region: Forkhead; pfam00250" /db_xref="CDD:459732" ORIGIN 1 ttttcccgtg cctttctgcc tttgcctttt ttcaccgagt gtgcgttgtg tgtttttcct 61 ggcttacgtg attgaaattg agacagccag gacatcatga ttgtcaacat gcccgtcaac 121 ggcacgggca gtgcatccag ccccacatcg aaccccaatc ccggcaacaa caacctgaac 181 aacaacaaca gcagcaccac caatcaaaat aatagtagtc ttcccgggga ctacaatttc 241 ctgaagcgca agtacgacga tcaagaggat ctggccttgg gccaggtcta cgagccgatc 301 gaatcgaatc cctggaagaa gcggcacctg gactacgacc cagccggcga tctgcagttc 361 cacctgcagc tggaacagcc ggccagcaat ccgaatccgg cagttaatcc agctgcaccc 421 gcccaatccc aatcccagtc gcaatctcag tcgcagtctc agtcatccac gacgtccttc 481 atcaacgatc tctttgccta cgacagcagc ctcctggtgc ccaccgccgc ctactcccac 541 tgccccccgt cgagtgctcc gctggaggac aatggcggct ggacgggtgg cgagctcctg 601 gagctggacc atcgctacaa ctccggcctg caggcggagc tgggacaact gaatgccacg 661 ctgccgccgc cgccgccagc cacgtcatca tcatcatctc agaactctgc accacagcag 721 cccaatcctg gccagaatcc caatcacagt cagaactttc tggtgccgca gaagcagcgg 781 ctactgtcgg cgggtcgacg cacctcgtcg ggctcccagg gaagtggtgt cgcccacgaa 841 gccaccgagg cggacttcga ggacaagaac ctgtcctggc tgctgaactt caagttcgac 901 gagttcccgc acctgtcgcc gcacaatcag gtccacggac aggcagtcaa tctgccggaa 961 ggcggtgctc ctcacccaca tcctcctgcc tccacggcga tggcgatcag cacgtcaccc 1021 tgcagttccg cctcgcccac atccgcctcc gtcttatccg ccgcctcagc cacgaactcg 1081 acgcattccc tgggatcggg aatgatggat caacgggcca ggtcgccgaa gagctgctcc 1141 agtgcggcga tgccaacgag cggaggaggt ggaggtggag caggaggagg cggctgctct 1201 ggagtcgctg cctctccagc agccggagtg ggctccacca agacgggccg caagttcgag 1261 gagctggtga tggaggtcac ctcggagctg gacggcaacg acatgatcgt cgccgagcac 1321 gttgtcgtcg aggatacatc gtccaaggcg ccaaagaaac caccgttcac ctacacggag 1381 ctcatcgaat acgccctcga ggataagggt gagctgactg tgtcgggcat ataccaatgg 1441 atatccgatc gctttcccta ctacaaatcc aatgatgacc gctggaagaa ctcagttcga 1501 cacaatctct cgattaaccc acactttcgc aagggcgtga aggcgcctca aggagccggt 1561 cacctgtggg ccatttccag cggagattcg gccgagaatg tcctggcctg ggagcataag 1621 aagcagcgac tggatttatt ctttaaaatg gagtcgatca accgtgagcg cattcagcag 1681 caccagcagc agcagcaatt gcagcagcaa catcagcagc agcagcaaca gcaacactcg 1741 ccgcagcagc agcagcaaca tcagacggca cagcaggcca gcagttgtct ctacgatgaa 1801 gcggcggtgg cagccgccac tctcacccag gaaatgatgc agtcgtccgg cggtggcaac 1861 gaggccaccc agcagcagca tcaccacagc caccagaacc accagagcca ccatcacaac 1921 catcaccacc aaagactgtt gcccttcaac gatctgctga gcgacgacga gctgcgaaag 1981 acggcgggcc agattctgaa tggaatccat cgcgaggtgg aggtgcagtc ggtcaactcc 2041 atcatcagca cttatcacga tgtcctgctg gataatgaag actatctcaa tcccatacac 2101 aaggatgtgg tggtcacgga aagtgtcctg cggcagcagc acggcaacct gggcggcggc 2161 agccacaacc atttgggcgg caatgggcac atgggcagcg ggagcggaag tggaagcggc 2221 agctcgcagt actacatcac cgagatcgat cccatggagc tgggcatcca gatgtcgcac 2281 caggtggagc cctccgagga ggaggtgctc ttcagcgacg agttcaacct caactacttt 2341 ggctacaatc ccggcagcga tatagtcgct tgaccgcgca gacagcagac tccagtttca 2401 gctcctccag ctcccgctca gccaagcaat tgaactatac aaatatatag gtatatctat 2461 atattgatcg atcctgctcg atgccatgac aacaatcgta attgtagccg atctactcat 2521 aagccaactc taaacgaata ctagtcacac ttgaacaaca cttacatgta accacctaaa 2581 ccaaagtccc atttaccatt taccatttag accctatgta tagtctagtc ttgagtgtac 2641 caataacaac cccagccccc ctccacaaca agtcatattt ttttgtctat actttagttg 2701 aatacctagc cgataagtag cttgctagcc ctaagtactt actcgtatat ctatgtatct 2761 atctgcagat attacatact tagctcttgc tcgtctccga atttagttaa gtgtttttac 2821 atgtagccga atatccgtaa acaataccag gcagattgat ctcctctcct cttaaatgtt 2881 accgaaacta ggtctagaga gcagacaagt aatacccatg tccgtagaac taatggcacc 2941 taactg