Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218338 1106 bp mRNA linear INV 09-DEC-2024 3 (Vha36-3), transcript variant X2, mRNA. ACCESSION XM_070218338 VERSION XM_070218338.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1106 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1106 /gene="Vha36-3" /note="Vacuolar H[+] ATPase 36kD subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108055792" CDS 194..892 /gene="Vha36-3" /codon_start=1 /product="V-type proton ATPase subunit D 2 isoform X2" /protein_id="XP_070074439.1" /db_xref="GeneID:108055792" /translation="MKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVM KEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPVFEPYTDGVDTYE LAGLARGGQQLAKLKKNYQSAVRLLVELASLQTSFVTLDDVIKVTNRRVNAIEHVIIP RINRTIEYIISELDELEREEFYRLKKIQDKKREARKASDKKREEQRRLGQLTEETKEV QNILDEDGDEDLLF" misc_feature 194..760 /gene="Vha36-3" /note="ATP synthase subunit D; Region: ATP-synt_D; pfam01813" /db_xref="CDD:460343" polyA_site 1106 /gene="Vha36-3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gagtcttcat tcgctggccc agtttgttgt cgtgctgttc tgttcgctgt tccctcattt 61 ctgtcgtcta ttttattttc gtagtgtcgc atatatttag taaatatttt gttgttgtta 121 tttatagttc ggacttggtt ggcgtgccaa agaccgtctg cccatatttc cctcacgtgg 181 tgcccaaacg ctgatgaaat cgcgtttggc gggcgcaacc aagggacatg gactgctcaa 241 gaaaaaagca gatgccctgc agatgcgctt tcgtctgatt ctgggcaaga tcatagagac 301 caaaaccctg atgggccagg tgatgaagga ggccgccttc tcgttggccg aggtcaagtt 361 caccaccggg gacatcaacc agattgtcct gcagaatgtg accaaggccc agatcaagat 421 acgcaccaaa aaggataatg tggccggggt cacgttgccc gttttcgagc cctatacgga 481 tggcgtggac acctacgagt tggccggcct ggcacgtggt ggccagcagc tggccaagct 541 gaagaagaac taccagagcg cagtgcgtct gctggtggaa ctggcctcat tgcagacctc 601 ctttgtgacc ctcgacgatg tcatcaaggt caccaatcgg cgggtcaatg ccatcgagca 661 cgtgatcatc ccccgcatca accgaaccat tgagtacata atcagtgagc tggatgaatt 721 ggagcgcgag gagttctatc gactgaagaa gatccaggac aagaagcgtg aggcacgcaa 781 ggcatccgac aagaaacgcg aggagcaacg tcgtctgggc caactgaccg aggagaccaa 841 ggaggtgcag aatatcctcg atgaggacgg tgacgaggat ctgctcttct agagccgatg 901 ccacatccat tataccttat cccaacataa ccatacacca accacctgct gctacgcccg 961 acgaacccaa tcactcaact ctgctacctc acaacctccc atcaaaagac cacctctctg 1021 tttttcgttg ttgtcgttca ttgtgatccg gatgttgtac cacttgtcgt tcttggaaat 1081 acaatccgta atcgtaacct ctgtga