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LOCUS XM_070218330 4496 bp mRNA linear INV 09-DEC-2024 (LOC108060895), transcript variant X2, mRNA. ACCESSION XM_070218330 VERSION XM_070218330.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4496 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4496 /gene="LOC108060895" /note="RNA-binding protein 33; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060895" CDS 278..3667 /gene="LOC108060895" /codon_start=1 /product="RNA-binding protein 33 isoform X2" /protein_id="XP_070074431.1" /db_xref="GeneID:108060895" /translation="MSDINDDLLNYELGDDIDDQALLGADEDELLLSDEELEKDVTSE VKQQMRAEAEEWAQEQIRQHERKHKEQLQAGAAVAASVTPTAAAAQGAQGGAAPQPES TSVPVPAPVHPPAPPPATAAVNPPSGAVEKPKEEPANEEQRVALTDPPAQQAKEQAPA EREPHPNNGNGNGNEEATENAGSQSEGEQGLGLSSSLLASSQESLPSASSASVISELP DPREDEEEREERTNYKTASERSDNSMRQQQEHAHMSPYQHQQRRHHGGHGDKSRGGGR FMQQQQNQMGKPPRGLGTRHHLLRNPSPMFGVQQQQQQRMGMAGMQPPPQQQRYGMPG QYPPSQPPNQSSQQQAPTNNTQPASPLHAPPTHSHMMHHSHNPNGGVPPHLLPHPHEQ VRVGLLQPPPLNAYAPNPGGYRNGALLGPGPGPGPNPHQQQQQPSGMRPPLYRNAPPA YGYDQGHPPQHPPQFMRPHNGWRPQGDNTRMQRPPLQTLPLHMMPGAPPNFANGMGMR GPPPPQQQQQQQQQSQQPPPQQQQPGPQHPGNPGQQQQPNGPPPPQQQQGGSSSVPRV SKVLINPNFKGGVEAATNKFIKETHFMPAINSDAELQRQQDEFINKNRQYFEKRRMER SPPSAGSGAVASGQAGERRRSRSRSRSRGRSYSPVKRMERERERDRERERERERDRDR ERDRERYGANRAAGNRGFRRAASRDRDENRGGASAASGQGAGGVPSSGAAPPKRRRSG SGGPGGTARNPFSGEPRGRTSETGSRSMPSDEDEETRNYRLEIEKQKQLREKIMRDKE LKRRRAAEEKLHEEKRAEQHNSPARDDQEAVSAGQGSAASTAAAPKHRPAQAAGERKV ISLKRRDDQDAGNVRNRQAPSQSQSQSQSNAQPTQQQPAARKQLTAAKIAPEAKRSIT DHLAPSSKQQQHHHQQQQQQVSAAVPARALGGSASGGTPPKPRDMLRLGTPSDDEVEL DYDDDDLLLDEEDRLLATPSPPPQKASSKRSATPELLVVKRNHKVMRGGGGSSTSAPS FSSSQRRVVLKPTSNGSSSSGGGDQQSSHGGRRGERRQREENAMQRKGNAGGGGSSGS GGGIFDRLEKRQASSGGSSSGGGSGHKQRSKAPARIVLKHD" polyA_site 4496 /gene="LOC108060895" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caataccgat tgcatccctc taaaaaattg acaccaaact gcgtgtgaaa aagatccaaa 61 gttttcgcaa acctatcggg tgtctattta ttgacagatt gacagctaaa aacgcgcgcg 121 ctacgttttc gagtgcgtta caacaccgcg aatcgaacca aaatgttgta aagagccgcg 181 cagccagtgg acattcgctg ttctacttct ctaaataaca cacacacacg cacacacgcg 241 cgcgccgccg agtgtcaaca gctgccctgg cgaaaaaatg tcggacatta acgatgacct 301 gctcaactac gagctgggcg acgacatcga tgaccaggct ctgctcggcg ccgacgagga 361 tgagttgcta ctctcggacg aagagctcga aaaggatgtc accagcgagg tgaagcagca 421 gatgcgcgcc gaggccgagg agtgggccca ggagcagatt cgccagcacg agcgcaagca 481 caaggagcaa ctgcaggcag gagcggctgt agcggcatct gttactccca cagcggctgc 541 agctcaggga gctcagggag gagcagcccc gcaacccgag tccacctcag tcccagttcc 601 tgcgccagtt catccgcctg ctcctccacc agccaccgcg gcagtcaatc cacccagcgg 661 cgcagtggag aagcccaaag aagagccagc gaatgaggag cagcgggtgg cactcacaga 721 tcctccagcc cagcaggcca aggagcaggc accagccgaa agggaaccac atcccaacaa 781 tggaaatggc aatggcaacg aggaggccac cgagaatgcg ggcagccaga gcgagggaga 841 gcagggattg ggcctctcct cctccctgct ggcctcctcg caggagagcc tgcccagcgc 901 cagctccgcc tcggtgatct ccgagctgcc cgatccgcgc gaggacgagg aggagcgcga 961 ggagcgcacc aactacaaga cggccagcga aaggagcgac aacagcatga ggcagcagca 1021 ggagcacgcg cacatgtcgc cctatcagca ccagcagagg cggcaccatg gaggccatgg 1081 agacaaatct cgcggaggag gacgctttat gcagcagcag cagaaccaaa tgggcaagcc 1141 gccgcgagga ttgggaactc gccaccacct gctgcgcaat ccgtcgccca tgttcggcgt 1201 tcagcagcag cagcagcagc gcatgggcat ggccggaatg cagccgccgc cgcagcagca 1261 gcgatacggc atgccgggcc agtacccgcc cagtcagcca cccaaccagt catcacaaca 1321 acaagcaccg accaacaaca cacaacccgc ctctcccctc cacgctcctc ccacgcattc 1381 gcacatgatg caccacagtc acaatccgaa tggaggcgtg ccgccgcatc tgctgcccca 1441 tccgcacgag caggtgcgcg tgggtctgct gcagccaccg ccgctgaatg cgtacgctcc 1501 caatcccggt ggctatcgga atggagctct attgggtcca ggaccgggac cgggacctaa 1561 tccccaccag cagcagcagc agccatctgg catgcgtccg ccactctacc gcaatgcacc 1621 gcccgcttat ggctacgatc agggccatcc gccgcagcat ccgccgcagt ttatgcggcc 1681 gcacaatggc tggcggccgc agggcgataa tacgcgcatg cagcggccac cgcttcagac 1741 gctgccgctc cacatgatgc ccggtgcccc gccaaacttt gccaacggca tgggaatgcg 1801 aggtccgccg ccgccgcagc agcagcagca gcagcagcaa cagtcgcaac agccgccgcc 1861 gcagcagcag cagccaggac cgcagcatcc cggtaatccc ggccagcaac agcagccaaa 1921 tggaccgccg ccgccgcaac agcagcaggg tggctcctct tcggtgccgc gggtcagcaa 1981 ggtgctcatc aatccgaatt tcaagggcgg cgtcgaggcg gccaccaaca agttcatcaa 2041 ggagacccac ttcatgcccg ccatcaacag cgatgccgag ttgcagcgcc agcaggatga 2101 gttcatcaac aagaacaggc agtactttga gaagcggcgc atggagcgtt cgccaccgtc 2161 ggcgggttcg ggagccgttg cctctggtca ggcaggcgag cggaggcgca gccgcagtcg 2221 cagtcgctcc cggggacgca gttactcgcc cgtgaagcgc atggagaggg aacgcgagag 2281 ggatcgggag cgagagaggg aacgggagag agatcgtgac agggagcgag atcgtgaacg 2341 atacggggcc aatcgggcgg caggaaatcg aggattccga cgagcagcca gccgggatcg 2401 agacgagaat cgtggtggtg cgagtgccgc gagtggccaa ggagcggggg gagtgccatc 2461 cagtggagca gcgccaccca agcgacggag aagtggctcc ggcggaccag gcggcaccgc 2521 ccgcaatccc ttctccgggg agccacgcgg ccgaacctcg gaaacgggaa gccgcagtat 2581 gcccagcgac gaggacgagg agacgcgcaa ctaccgcctg gagatcgaga agcagaagca 2641 actgcgcgag aagatcatgc gtgacaagga gttgaagcgt cggcgtgccg ccgaggagaa 2701 actacacgag gagaaacgcg ccgaacagca caattcgcca gcacgcgacg accaggaggc 2761 ggtgtcggcg ggccaaggat ctgcggcgtc tacagcggca gcgccaaagc atcggcctgc 2821 ccaggcagcc ggcgagcgga aggttatctc gttgaagcgt cgcgacgacc aggatgcggg 2881 caacgttcgc aacaggcagg caccttcgca gtcgcaatcg cagtcgcagt ccaatgctca 2941 gcctacccag cagcagccgg cggcgcgcaa gcaactgacg gcggcaaaga tagcgccaga 3001 ggccaagcgc agtataaccg atcacctggc tccctcctcc aagcagcagc agcatcatca 3061 tcagcagcag cagcagcagg tgtctgcagc tgtgccggcg agagcgttgg gaggatctgc 3121 aagtggcggc actccgccga aaccgcgcga catgctgcgc ctgggcacgc ccagcgacga 3181 tgaggtggag ctggactacg atgacgatga cctgctgctg gacgaggagg atcgtttgtt 3241 ggccacccct tcgccgccgc cgcagaaggc gagcagcaag agatcggcca cgccggagct 3301 gctggtggtc aagcggaacc acaaggtgat gcgaggcggc ggcggcagct caacttcggc 3361 gcccagcttt agctccagcc agcggcgggt ggtcctgaag cccaccagca atggcagcag 3421 cagcagcggc ggtggagatc agcagtcatc gcatggcggc aggagaggag agaggaggca 3481 gcgggaggag aacgcaatgc agcggaaggg aaacgcagga ggaggcggaa gctcgggatc 3541 tggaggagga attttcgatc ggctggagaa gcggcaggcc tcctcgggag gaagcagcag 3601 cggcggcggg agcggccaca agcagcgctc caaggcgccc gcacgcatcg tactcaagca 3661 cgattgataa ggatacttag atttaagctt aaagtttttt atatcgatta tctcgactgt 3721 ggataagaga ttagcgacgt tgaggcggag gcttaggctt aggaggataa gaggaacttt 3781 agctttaagt tataaagttg caacttgttg atctgtagac ttgtataccc aacgtctata 3841 taaagagcgt atgtatttgg tgagtatgag taagggtgtc tgcaccgtac tcgccatacg 3901 gtacacatat atatatatat atattcattt agccctaagt gtacaaatct tatcaatgac 3961 taaaacgtgc ttcgttttct taaccgcaat ttgtatttaa atttagaact aagtgggatg 4021 cttaaagctt gacctggaca acaaaacaat taccacaact gtagcgaaca caactggaac 4081 tcaaaaattc agttatgtgt gcttgcatat agcctatgta atccattgaa tatatattta 4141 cacaattata tatattaatt ataaatactt caaattagtc ttaagtttaa cgagctgagc 4201 gtcttgcttt tttacgatga cggttctaaa agattttatt gaaagtaaag aggagaaaat 4261 ccaaacattg acaagcgcaa atgctcccga ggaatttaac ttgtatttaa attatgaccc 4321 tgacctggtt atgttttttt ttttaattat tttttacatt gtgtcccgtt gtttgtaaat 4381 gaaatgtatt gtctgtctca ttgtgttctt ctctgtaact actataaact atttacaaaa 4441 ctatgtttgc ttgtgaacta gtttaaccaa taaacttgaa atattgtagc atatta