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LOCUS XM_070218301 6415 bp mRNA linear INV 09-DEC-2024 (CHES-1-like), transcript variant X6, mRNA. ACCESSION XM_070218301 VERSION XM_070218301.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6415 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6415 /gene="CHES-1-like" /note="Checkpoint suppressor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060311" CDS 184..3954 /gene="CHES-1-like" /codon_start=1 /product="uncharacterized protein CHES-1-like isoform X2" /protein_id="XP_070074402.1" /db_xref="GeneID:108060311" /translation="MSTDNPTQLLTTRDLSQLRGHLQSGAAVASTSPTSSSSVVAAAA SVAAAHGYRTIAAPPAVTSSSASSACSTTSVASAAAPPHISTSNSNMPASASKYVFLQ HNHNGGFTAYDGSTAAATTTTTGSPGGGNIVLLAAEPLEMGTAETLVNVRTTDGDDGE LRSLSWLNDTNLIKGIVTTTTAAGQAGKRGAVAIKTTTAGGGSVAAGGSGVACIVSDF IEELPTNLSESSEQQQEVGVSASSSGSAAVYSTTTVHKGASGTTTVVEYKASKAASNQ QQQQQQQTGYLPTPTRSHGYLPVVVSSAAVAVANPTILSSSPAKQQQQQQQIYVTSNG NTGGGGSGTIYKAATPALSSPTTSNTTTHHPHKKYLREKMHVQMDHSSHVASTVTVVS SPASSNNSSISSSSHAGSGTGSTGSGSSTAAVNGGNSPVPKASSFSTVFEAVNYATSA VNNSNSNGNITPSSQAMLHGVQETPQAVVTTTTLLPPGYSFVNHVASTPHVISAPAHV NSPETPTGAALLPGTYYTTGSTSNTSTTSIQPRTLQLSVSPPPPTSHVHNGSIGGNPA GSGAVNLRSPNSYTSYDNEDSLKEFDLVVSSRMHTSTPQYSVAKNGGANGYNNSSNVI GGGGNGGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKE IYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNMGKGSLWRVEPQQRQNL IQALNRSPFFPNSAVDKISPSLKSPGGGSAYDSVDGVASAVPPSSVVSSQPVGGGATG AGVLPAGVAAVALSSTPTKSNGLVALANGASQATSAARPHSPNGGGSGSHARFDPKLF PNLSKAFRNIREDSANGQPLLQDVLDDELSSGDYQNNNSKYGSNYVALNGGAATANGS GGGAATNGASDGINFERLARDCGADSMDDVHAAAAMLFLKHGPKAFSEPFQNGAPVIT SSPSEDHTYSAGGNSNADSGSSTPLTNGNVLASVAQAVVQAQNNQGGGPGSDSNCASS DAAYDSSEENHNITPEEMADRQRHRDGVDALLSLSRSSIVECGSVATTHYHSNGSSGS SHGSPHKRASSHSLEEEHLQQHREQQQQQHQQQHLQQQQQQQHLHQQFGSSQAVYTNG SGSKMALLSSAAANVALAQQQQQQQIHQQDLYTNSAAGHNASIYLSGLNNHCLPSVGG VSSAVAVGVAAAGMLPQHLSAAMVAAAAASKNKVKPLRGLRTKIKRKSAWMR" misc_feature 2152..2379 /gene="CHES-1-like" /note="Forkhead (FH) domain found in Forkhead box protein N2 (FOXN2) and similar proteins; Region: FH_FOXN2-like; cd20031" /db_xref="CDD:410805" misc_feature order(2167..2169,2221..2226,2233..2235,2290..2295, 2299..2304,2311..2313,2332..2334,2359..2367,2371..2373) /gene="CHES-1-like" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:410805" polyA_site 6415 /gene="CHES-1-like" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 catttttttg cctttcagcg cagcggacgt aaatatactt attaacaaaa agaaaataag 61 aagaaaccct taaacaataa actgcaataa gtaaacatca gcaaaaaaag aaaaagactc 121 acaaacaaag caaagaaaac aaacaaaacg tcgtcgttga tgaagcaaaa ataattgagt 181 agcatgtcca cagataatcc cacacagttg ctgaccaccc gcgatttgag ccaactgcgt 241 ggccatctgc aatccggcgc agcggtggcc tccacttcac ccacatcctc ctcttctgtg 301 gtggcagcgg cggcgtcagt ggctgccgcc catggatacc gtaccattgc agctccacca 361 gcagtcacct cctcctccgc ctcctccgcc tgcagcacca catcagtagc atcagcagca 421 gcaccaccac atatatcaac aagcaatagc aacatgccgg ccagtgcctc gaaatatgta 481 tttctgcaac acaatcacaa tggtggcttc accgcctacg atggttccac tgctgcggcg 541 acaacgacga cgacgggaag tcccggcggt ggcaacatag tgctcctggc agcggagcca 601 ctggaaatgg gcaccgcgga gacgctggtc aatgtgcgaa ccaccgacgg cgatgatggc 661 gagctgcgtt cgctgtcctg gctcaacgat accaatctga tcaagggcat tgtgaccacc 721 acaacggcgg ccgggcaggc gggaaaacgt ggtgcagtgg ccattaagac gacgacggcg 781 ggaggaggat cagtagcagc tggaggatca ggagttgctt gcatagtgag cgatttcata 841 gaagagctgc ccacaaatct gagtgagagc agcgaacagc agcaggaggt tggagtatcg 901 gcgtcatcga gtggatcagc ggctgtctac agcaccacaa cggtgcacaa gggagccagt 961 ggcaccacca cagtggtgga gtacaaagcc agcaaggcag cctccaatca gcagcagcag 1021 cagcagcagc agacgggcta tttgcccacg ccaacgagaa gtcatggcta tttgccggtg 1081 gtggtgagca gtgccgccgt tgccgtggcc aatccaacta tactctcctc ctcgcccgcc 1141 aaacagcagc agcaacagca acagatttat gtgaccagca atgggaatac aggaggagga 1201 ggatcaggaa ccatctacaa agcagccacg ccggctttaa gttcgccaac caccagcaac 1261 acaaccaccc accatccgca caaaaagtat ctgcgcgaga agatgcacgt ccagatggat 1321 cacagcagtc atgtggcctc caccgtaacg gtggtcagct cgccggcctc ctcgaacaat 1381 tcctcgataa gcagctccag ccatgcggga tcgggaacgg gatccacagg atcgggatcc 1441 tcgacagcgg ccgtaaatgg tggcaatagt ccagtgccca aggccagtag ctttagcaca 1501 gtcttcgagg cggttaacta tgccacatca gcggttaaca atagcaatag caatgggaat 1561 attacgccca gcagccaggc gatgctccat ggagtccagg agacaccgca ggctgtggtc 1621 accacaacaa ccttgctgcc gccgggctat agctttgtca accacgtggc cagcacgccg 1681 catgtcatat ccgccccagc acatgtcaac tcaccggaga cgccgactgg agctgctctg 1741 ttgccgggaa cttactacac cacaggaagc actagtaaca catctacaac ctccattcag 1801 ccacgcactc tgcagctatc cgtttccccg ccgccaccaa cgagtcatgt gcacaatgga 1861 tcaataggag gaaatcctgc tggatctgga gcagttaacc tgcgcagtcc caacagctat 1921 accagctatg acaacgagga ttcgctcaag gaattcgatc tggtggtcag ctcaaggatg 1981 cacacaagca cgccgcaata ttcggtggcc aagaatggag gagccaatgg ttataataac 2041 agttcgaacg tgattggagg tggaggcaat ggaggagcag gttccaatac gccgcaaaag 2101 cagaagcatc ccaataacgt gccatacgat ccgctagtgc ataccaataa caagccgcca 2161 tatagcttta gctccctgat tttcatggcc atcgagggtt cgaatgaaaa ggccttgcct 2221 gtgaaggaga tctacgcgtg gattgttcag cattttccgt acttcaagac ggcaccgaat 2281 ggctggaaga acagcgtgcg tcacaatctg tcgctgaaca agagcttcgt gaaagtggag 2341 aaggcgccga atatgggcaa gggttcgttg tggcgcgtgg agccgcaaca gcgccagaat 2401 ctcatccagg cgctgaatcg atcgcccttc tttcccaact cggcggtgga caagatcagt 2461 ccctcgctca agagtcccgg cggtggatcg gcctacgata gcgtcgatgg tgtggcatca 2521 gcagtaccgc cttcctcggt tgtcagctcc caaccagttg gaggtggagc aacgggagca 2581 ggagttcttc ccgccggggt cgctgccgtg gctctgtcct ccacgcccac gaaaagcaat 2641 ggtctggtgg cgctggccaa cggcgctagt caggccacga gtgcagccag gccgcacagt 2701 cccaacggcg gcggcagcgg cagtcatgcc cgcttcgatc ccaagctctt tcccaatctg 2761 tccaaggcct ttcgaaatat tcgcgaagat tcggccaacg gacagccgct gctgcaagat 2821 gtcctcgatg atgagctgtc ctctggggat tatcagaata ataatagcaa gtatggcagc 2881 aactatgtgg ccttaaatgg aggagctgca actgcaaatg gcagcggagg aggtgccgcc 2941 acaaatggag cttccgatgg cattaatttc gagcgtctgg cccgcgattg cggagcggac 3001 agcatggacg atgtgcatgc ggcggcggcg atgctcttcc tcaaacacgg accaaaggcc 3061 ttcagtgagc ccttccagaa tggtgcaccg gtgataacga gttcccccag cgaggatcat 3121 acatattcag cgggcggcaa cagcaatgcg gacagtggct cctccacgcc gctgaccaat 3181 ggcaatgttt tggccagcgt ggcgcaggcc gtcgtccagg cccagaataa ccagggagga 3241 ggtcctggat ccgatagcaa ttgcgccagc tcggatgccg cctatgacag cagtgaggag 3301 aatcacaaca tcacgcccga ggagatggcc gatcggcagc gacatcgcga tggcgtggac 3361 gccctgctat cgctttcccg ctcctccatt gtggagtgcg gctcggtggc caccactcat 3421 tatcacagca acggcagcag tggcagcagt cacggttccc cgcacaagcg agcctcgagt 3481 cacagcctgg aggaggagca cctgcagcag cacagggagc agcagcagca gcagcaccag 3541 cagcaacatc ttcagcagca gcagcaacag caacacctcc atcagcaatt tggcagcagt 3601 caggcggtct acaccaatgg cagtggcagc aagatggctc tattgagcag tgcagctgcc 3661 aatgtggctc tggcccaaca gcaacagcaa cagcagattc accagcagga tctatacacc 3721 aactcggcgg ccgggcataa tgccagcata tatctgagtg ggctgaacaa tcactgcctt 3781 ccctcggtgg gcggtgtgag ctcggcggtg gcggtgggcg tggcggcggc gggcatgttg 3841 ccgcagcatt tgagtgctgc catggtggcg gcggcggcgg caagcaaaaa taaggtgaaa 3901 cccttgaggg gactgcgcac caagatcaag cgaaagtccg cctggatgcg gtgaatatgg 3961 cggcaggctg gcggcaaatg cacctaaaac agccaaccgg aaaaaagcac caaccccccg 4021 cccccctgcg acctattgtt gtctctttct aaagcaaaaa aaaatattgt tcaaatcaca 4081 gagcatttag actaaacaaa tttcgtaacc ttaaattttt tcctttattt tgctctattt 4141 tttacaagtt ttttgtgtgt tttttatacc cctttccgtg tttgttatac aaattactga 4201 ctattttttt tatattatta ttattattac tacatttttt aaatttagcc ctaaatgtat 4261 tttttttttg accttacctt tttgaaccgc aattgattgt tggccattta actattacat 4321 tattaactat taattatata tatgatttac tagccatcct agctgcaatt tcttataact 4381 cttagctgtt aagtgcaatt atgatttttt ttagcttgta attttaattt gtgcaaatat 4441 tttacagacc aattgaaagc gaaaagatga aaaacgagaa aaagttatag agtggaaaag 4501 tgttccccga tcgttgttag cttttaaggc agaaatctag tttattcgtt ttaaattgca 4561 aaatatgagg gacacaaact aagtaaactt ttccagcgta tcagtgacaa ggtttatatc 4621 aaaaaggaat aggaaaacta agcgataaac gaaaacaaca ccaacaaatt gagctaagta 4681 agaaaaatca aagaaaacat gaaacaaaat aacgaaataa agcaacaaaa aaaaattgta 4741 aaaagcgcaa gaaaaaggaa aaaagctaga aaacaaacaa agttaagatc ctttttattt 4801 tggttatatg tgccgcaaga aaatgttttt cctacactta taagatccaa aaaacacacc 4861 ctacttacaa tgatctaaag agaaagcgat ataaaacata tacaaaaata tataaaaata 4921 tatattatat atattatata tagaaagaga gttatttaga gaaacttaag ataagccaag 4981 caagaaaccc acaaaggaac acacatttag cgccttatat attgagtcct tagctaaaaa 5041 caaaagagag atctgttgaa gaattgtttg aactgctttg ttatacgaat gcatgagtaa 5101 atatatatat atatatatat tatataacta aggcccccct actcttttca cccccctcaa 5161 gcaaatgtta aatcaaagat atttagttaa taagtcagga aaaacgaaaa tccttgttgt 5221 aagcttcatt tagatggtta cgtagttgaa atgctaaaca tttgttaaag ggaaatcaaa 5281 tcaaatccgt aagctagccg attttagttg aatgaacctc caatcctaca atccccaggt 5341 gtatatacag aatacagaga atggaataag cgaattagct gttgaaatta tgctgcacat 5401 ctttacatag gcatatttac atattgtgga aaccaagaaa tacttattaa catttaaata 5461 agcaaaagga agaacgaact tgacaaagaa cgccctaagt gtatacactt catgtacctt 5521 tttagcaaaa agcaaaaacg caaaagcaaa gatcgcatta aaaattatat aaatataaat 5581 ataaaaatat atatatttaa attaccactt acgaaactaa actaaatgtt gatgtcaaag 5641 agaaaccaat ttgctagttg ttaaaaacaa aacagaaaaa aaagaaaatg ttaaaaatat 5701 tttgtttcct caagaactta ttattacgat tatggttttt tgtttgttaa ttttagttca 5761 attacataag aatattgcct tgaagcatgt taaatgggga aagaaatgtg actaaatacc 5821 agaagcgaga acaacaaaat aattgtatac ttagctttaa acttaaggtc ctaaaaaaaa 5881 aggaaataga aatcccgaaa cacccccttt ttataaccat agccccacaa accctttgca 5941 cacgacacac agtgaaagac aatcgccgcc cgtgttgttg ttgtcgttgt ctcgcttaag 6001 tttaaacaaa ttctatgtag ctatagacac ctacgagtaa tgagtaatat atatatgcat 6061 aaattacaga cagcaatagc aaagtacata catatacgac aaatattgtt atgcaacctt 6121 aagctttagc cgagaaaggt ggataactat cttcccgatc ccgaatccta tatcctatat 6181 cccgtatccc ctatatcttc tatatctccc ccaaaacaac aaacaaccga tgagctaacc 6241 agttttgtta acgtgttttt tcttctattt taattattat atcgcatcat tattattatt 6301 attattatta ccgtatatat acatgctggt atatattact tatatattta attgattata 6361 caactttttt tgcgtaccaa atacacacca atcaaaatgt gaaatatttt cttta