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LOCUS XM_070218300 6397 bp mRNA linear INV 09-DEC-2024 (CHES-1-like), transcript variant X5, mRNA. ACCESSION XM_070218300 VERSION XM_070218300.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6397 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6397 /gene="CHES-1-like" /note="Checkpoint suppressor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060311" CDS 163..3936 /gene="CHES-1-like" /codon_start=1 /product="uncharacterized protein CHES-1-like isoform X1" /protein_id="XP_070074401.1" /db_xref="GeneID:108060311" /translation="MSTDNPTQLLTTRDLSQLRGHLQSGAAVASTSPTSSSSVVAAAA SVAAAHGYRTIAAPPAVTSSSASSACSTTSVASAAAPPHISTSNSNMPASASKYVFLQ HNHNGGFTAYDGSTAAATTTTTGSPGGGNIVLLAAEPLEMGTAETLVNVRTTDGDDGE LRSLSWLNDTNLIKGIVTTTTAAGQAGKRGAVAIKTTTAGGGSVAAGGSGVACIVSDF IEELPTNLSESSEQQQEVGVSASSSGSAAVYSTTTVHKGASGTTTVVEYKASKAASNQ QQQQQQQTGYLPTPTRSHGYLPVVVSSAAVAVANPTILSSSPAKQQQQQQQIYVTSNG NTGGGGSGTIYKAATPALSSPTTSNTTTHHPHKKYLREKMHVQMDHSSHVASTVTVVS SPASSNNSSISSSSHAGSGTGSTGSGSSTAAVNGGNSPVPKASSFSTVFEAVNYATSA VNNSNSNGNITPSSQAMLHGVQETPQAVVTTTTLLPPGYSFVNHVASTPHVISAPAHV NSPETPTGAALLPGTYYTTGSTSNTSTTSIQPRTLQLSVSPPPPTSHVHNGSIGGNPA GSGAVNLRSPNSYTSYDNEDSLKEFDLVVSSRMHTSTPQYSVAKNGGANGYNNSSNVI GGGGNGGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKE IYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNMGKGSLWRVEPQQRQNL IQALNRSPFFPNSAVDKISPSLKSPGGGSAYDSVDGVASAVPPSSVVSSQPVGGGATG AGVLPAGVAAVALSSTPTKSNGLVALANGASQATSAARPHSPNGGGSGSHARFDPKLF PNLSKAFRNIREDSANGQPLLQDVLDDELSSGDYQNNNSKYGSNYVALNGGAATANGS GGGAATNGASDGINFERLARDCGADSMDDVHAAAAMLFLKHGPKAFSEPFQNGSAPVI TSSPSEDHTYSAGGNSNADSGSSTPLTNGNVLASVAQAVVQAQNNQGGGPGSDSNCAS SDAAYDSSEENHNITPEEMADRQRHRDGVDALLSLSRSSIVECGSVATTHYHSNGSSG SSHGSPHKRASSHSLEEEHLQQHREQQQQQHQQQHLQQQQQQQHLHQQFGSSQAVYTN GSGSKMALLSSAAANVALAQQQQQQQIHQQDLYTNSAAGHNASIYLSGLNNHCLPSVG GVSSAVAVGVAAAGMLPQHLSAAMVAAAAASKNKVKPLRGLRTKIKRKSAWMR" misc_feature 2131..2358 /gene="CHES-1-like" /note="Forkhead (FH) domain found in Forkhead box protein N2 (FOXN2) and similar proteins; Region: FH_FOXN2-like; cd20031" /db_xref="CDD:410805" misc_feature order(2146..2148,2200..2205,2212..2214,2269..2274, 2278..2283,2290..2292,2311..2313,2338..2346,2350..2352) /gene="CHES-1-like" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:410805" polyA_site 6397 /gene="CHES-1-like" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtatgtgtt taattaattt atgtgataat taatacaaca accgaaaaaa aaacgctttt 61 gcaagtgccg cccgcaaaaa ccaaaaagaa acagagagaa aaaacattga gagagagtcg 121 aaaaaaatat aaagaaaaga gagagcgcag caacaaaaac acatgtccac agataatccc 181 acacagttgc tgaccacccg cgatttgagc caactgcgtg gccatctgca atccggcgca 241 gcggtggcct ccacttcacc cacatcctcc tcttctgtgg tggcagcggc ggcgtcagtg 301 gctgccgccc atggataccg taccattgca gctccaccag cagtcacctc ctcctccgcc 361 tcctccgcct gcagcaccac atcagtagca tcagcagcag caccaccaca tatatcaaca 421 agcaatagca acatgccggc cagtgcctcg aaatatgtat ttctgcaaca caatcacaat 481 ggtggcttca ccgcctacga tggttccact gctgcggcga caacgacgac gacgggaagt 541 cccggcggtg gcaacatagt gctcctggca gcggagccac tggaaatggg caccgcggag 601 acgctggtca atgtgcgaac caccgacggc gatgatggcg agctgcgttc gctgtcctgg 661 ctcaacgata ccaatctgat caagggcatt gtgaccacca caacggcggc cgggcaggcg 721 ggaaaacgtg gtgcagtggc cattaagacg acgacggcgg gaggaggatc agtagcagct 781 ggaggatcag gagttgcttg catagtgagc gatttcatag aagagctgcc cacaaatctg 841 agtgagagca gcgaacagca gcaggaggtt ggagtatcgg cgtcatcgag tggatcagcg 901 gctgtctaca gcaccacaac ggtgcacaag ggagccagtg gcaccaccac agtggtggag 961 tacaaagcca gcaaggcagc ctccaatcag cagcagcagc agcagcagca gacgggctat 1021 ttgcccacgc caacgagaag tcatggctat ttgccggtgg tggtgagcag tgccgccgtt 1081 gccgtggcca atccaactat actctcctcc tcgcccgcca aacagcagca gcaacagcaa 1141 cagatttatg tgaccagcaa tgggaataca ggaggaggag gatcaggaac catctacaaa 1201 gcagccacgc cggctttaag ttcgccaacc accagcaaca caaccaccca ccatccgcac 1261 aaaaagtatc tgcgcgagaa gatgcacgtc cagatggatc acagcagtca tgtggcctcc 1321 accgtaacgg tggtcagctc gccggcctcc tcgaacaatt cctcgataag cagctccagc 1381 catgcgggat cgggaacggg atccacagga tcgggatcct cgacagcggc cgtaaatggt 1441 ggcaatagtc cagtgcccaa ggccagtagc tttagcacag tcttcgaggc ggttaactat 1501 gccacatcag cggttaacaa tagcaatagc aatgggaata ttacgcccag cagccaggcg 1561 atgctccatg gagtccagga gacaccgcag gctgtggtca ccacaacaac cttgctgccg 1621 ccgggctata gctttgtcaa ccacgtggcc agcacgccgc atgtcatatc cgccccagca 1681 catgtcaact caccggagac gccgactgga gctgctctgt tgccgggaac ttactacacc 1741 acaggaagca ctagtaacac atctacaacc tccattcagc cacgcactct gcagctatcc 1801 gtttccccgc cgccaccaac gagtcatgtg cacaatggat caataggagg aaatcctgct 1861 ggatctggag cagttaacct gcgcagtccc aacagctata ccagctatga caacgaggat 1921 tcgctcaagg aattcgatct ggtggtcagc tcaaggatgc acacaagcac gccgcaatat 1981 tcggtggcca agaatggagg agccaatggt tataataaca gttcgaacgt gattggaggt 2041 ggaggcaatg gaggagcagg ttccaatacg ccgcaaaagc agaagcatcc caataacgtg 2101 ccatacgatc cgctagtgca taccaataac aagccgccat atagctttag ctccctgatt 2161 ttcatggcca tcgagggttc gaatgaaaag gccttgcctg tgaaggagat ctacgcgtgg 2221 attgttcagc attttccgta cttcaagacg gcaccgaatg gctggaagaa cagcgtgcgt 2281 cacaatctgt cgctgaacaa gagcttcgtg aaagtggaga aggcgccgaa tatgggcaag 2341 ggttcgttgt ggcgcgtgga gccgcaacag cgccagaatc tcatccaggc gctgaatcga 2401 tcgcccttct ttcccaactc ggcggtggac aagatcagtc cctcgctcaa gagtcccggc 2461 ggtggatcgg cctacgatag cgtcgatggt gtggcatcag cagtaccgcc ttcctcggtt 2521 gtcagctccc aaccagttgg aggtggagca acgggagcag gagttcttcc cgccggggtc 2581 gctgccgtgg ctctgtcctc cacgcccacg aaaagcaatg gtctggtggc gctggccaac 2641 ggcgctagtc aggccacgag tgcagccagg ccgcacagtc ccaacggcgg cggcagcggc 2701 agtcatgccc gcttcgatcc caagctcttt cccaatctgt ccaaggcctt tcgaaatatt 2761 cgcgaagatt cggccaacgg acagccgctg ctgcaagatg tcctcgatga tgagctgtcc 2821 tctggggatt atcagaataa taatagcaag tatggcagca actatgtggc cttaaatgga 2881 ggagctgcaa ctgcaaatgg cagcggagga ggtgccgcca caaatggagc ttccgatggc 2941 attaatttcg agcgtctggc ccgcgattgc ggagcggaca gcatggacga tgtgcatgcg 3001 gcggcggcga tgctcttcct caaacacgga ccaaaggcct tcagtgagcc cttccagaat 3061 ggcagtgcac cggtgataac gagttccccc agcgaggatc atacatattc agcgggcggc 3121 aacagcaatg cggacagtgg ctcctccacg ccgctgacca atggcaatgt tttggccagc 3181 gtggcgcagg ccgtcgtcca ggcccagaat aaccagggag gaggtcctgg atccgatagc 3241 aattgcgcca gctcggatgc cgcctatgac agcagtgagg agaatcacaa catcacgccc 3301 gaggagatgg ccgatcggca gcgacatcgc gatggcgtgg acgccctgct atcgctttcc 3361 cgctcctcca ttgtggagtg cggctcggtg gccaccactc attatcacag caacggcagc 3421 agtggcagca gtcacggttc cccgcacaag cgagcctcga gtcacagcct ggaggaggag 3481 cacctgcagc agcacaggga gcagcagcag cagcagcacc agcagcaaca tcttcagcag 3541 cagcagcaac agcaacacct ccatcagcaa tttggcagca gtcaggcggt ctacaccaat 3601 ggcagtggca gcaagatggc tctattgagc agtgcagctg ccaatgtggc tctggcccaa 3661 cagcaacagc aacagcagat tcaccagcag gatctataca ccaactcggc ggccgggcat 3721 aatgccagca tatatctgag tgggctgaac aatcactgcc ttccctcggt gggcggtgtg 3781 agctcggcgg tggcggtggg cgtggcggcg gcgggcatgt tgccgcagca tttgagtgct 3841 gccatggtgg cggcggcggc ggcaagcaaa aataaggtga aacccttgag gggactgcgc 3901 accaagatca agcgaaagtc cgcctggatg cggtgaatat ggcggcaggc tggcggcaaa 3961 tgcacctaaa acagccaacc ggaaaaaagc accaaccccc cgcccccctg cgacctattg 4021 ttgtctcttt ctaaagcaaa aaaaaatatt gttcaaatca cagagcattt agactaaaca 4081 aatttcgtaa ccttaaattt tttcctttat tttgctctat tttttacaag ttttttgtgt 4141 gttttttata cccctttccg tgtttgttat acaaattact gactattttt tttatattat 4201 tattattatt actacatttt ttaaatttag ccctaaatgt attttttttt tgaccttacc 4261 tttttgaacc gcaattgatt gttggccatt taactattac attattaact attaattata 4321 tatatgattt actagccatc ctagctgcaa tttcttataa ctcttagctg ttaagtgcaa 4381 ttatgatttt ttttagcttg taattttaat ttgtgcaaat attttacaga ccaattgaaa 4441 gcgaaaagat gaaaaacgag aaaaagttat agagtggaaa agtgttcccc gatcgttgtt 4501 agcttttaag gcagaaatct agtttattcg ttttaaattg caaaatatga gggacacaaa 4561 ctaagtaaac ttttccagcg tatcagtgac aaggtttata tcaaaaagga ataggaaaac 4621 taagcgataa acgaaaacaa caccaacaaa ttgagctaag taagaaaaat caaagaaaac 4681 atgaaacaaa ataacgaaat aaagcaacaa aaaaaaattg taaaaagcgc aagaaaaagg 4741 aaaaaagcta gaaaacaaac aaagttaaga tcctttttat tttggttata tgtgccgcaa 4801 gaaaatgttt ttcctacact tataagatcc aaaaaacaca ccctacttac aatgatctaa 4861 agagaaagcg atataaaaca tatacaaaaa tatataaaaa tatatattat atatattata 4921 tatagaaaga gagttattta gagaaactta agataagcca agcaagaaac ccacaaagga 4981 acacacattt agcgccttat atattgagtc cttagctaaa aacaaaagag agatctgttg 5041 aagaattgtt tgaactgctt tgttatacga atgcatgagt aaatatatat atatatatat 5101 attatataac taaggccccc ctactctttt cacccccctc aagcaaatgt taaatcaaag 5161 atatttagtt aataagtcag gaaaaacgaa aatccttgtt gtaagcttca tttagatggt 5221 tacgtagttg aaatgctaaa catttgttaa agggaaatca aatcaaatcc gtaagctagc 5281 cgattttagt tgaatgaacc tccaatccta caatccccag gtgtatatac agaatacaga 5341 gaatggaata agcgaattag ctgttgaaat tatgctgcac atctttacat aggcatattt 5401 acatattgtg gaaaccaaga aatacttatt aacatttaaa taagcaaaag gaagaacgaa 5461 cttgacaaag aacgccctaa gtgtatacac ttcatgtacc tttttagcaa aaagcaaaaa 5521 cgcaaaagca aagatcgcat taaaaattat ataaatataa atataaaaat atatatattt 5581 aaattaccac ttacgaaact aaactaaatg ttgatgtcaa agagaaacca atttgctagt 5641 tgttaaaaac aaaacagaaa aaaaagaaaa tgttaaaaat attttgtttc ctcaagaact 5701 tattattacg attatggttt tttgtttgtt aattttagtt caattacata agaatattgc 5761 cttgaagcat gttaaatggg gaaagaaatg tgactaaata ccagaagcga gaacaacaaa 5821 ataattgtat acttagcttt aaacttaagg tcctaaaaaa aaaggaaata gaaatcccga 5881 aacaccccct ttttataacc atagccccac aaaccctttg cacacgacac acagtgaaag 5941 acaatcgccg cccgtgttgt tgttgtcgtt gtctcgctta agtttaaaca aattctatgt 6001 agctatagac acctacgagt aatgagtaat atatatatgc ataaattaca gacagcaata 6061 gcaaagtaca tacatatacg acaaatattg ttatgcaacc ttaagcttta gccgagaaag 6121 gtggataact atcttcccga tcccgaatcc tatatcctat atcccgtatc ccctatatct 6181 tctatatctc ccccaaaaca acaaacaacc gatgagctaa ccagttttgt taacgtgttt 6241 tttcttctat tttaattatt atatcgcatc attattatta ttattattat taccgtatat 6301 atacatgctg gtatatatta cttatatatt taattgatta tacaactttt tttgcgtacc 6361 aaatacacac caatcaaaat gtgaaatatt ttcttta