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LOCUS XM_070218298 6603 bp mRNA linear INV 09-DEC-2024 (CHES-1-like), transcript variant X3, mRNA. ACCESSION XM_070218298 VERSION XM_070218298.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6603 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6603 /gene="CHES-1-like" /note="Checkpoint suppressor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060311" CDS 369..4142 /gene="CHES-1-like" /codon_start=1 /product="uncharacterized protein CHES-1-like isoform X1" /protein_id="XP_070074399.1" /db_xref="GeneID:108060311" /translation="MSTDNPTQLLTTRDLSQLRGHLQSGAAVASTSPTSSSSVVAAAA SVAAAHGYRTIAAPPAVTSSSASSACSTTSVASAAAPPHISTSNSNMPASASKYVFLQ HNHNGGFTAYDGSTAAATTTTTGSPGGGNIVLLAAEPLEMGTAETLVNVRTTDGDDGE LRSLSWLNDTNLIKGIVTTTTAAGQAGKRGAVAIKTTTAGGGSVAAGGSGVACIVSDF IEELPTNLSESSEQQQEVGVSASSSGSAAVYSTTTVHKGASGTTTVVEYKASKAASNQ QQQQQQQTGYLPTPTRSHGYLPVVVSSAAVAVANPTILSSSPAKQQQQQQQIYVTSNG NTGGGGSGTIYKAATPALSSPTTSNTTTHHPHKKYLREKMHVQMDHSSHVASTVTVVS SPASSNNSSISSSSHAGSGTGSTGSGSSTAAVNGGNSPVPKASSFSTVFEAVNYATSA VNNSNSNGNITPSSQAMLHGVQETPQAVVTTTTLLPPGYSFVNHVASTPHVISAPAHV NSPETPTGAALLPGTYYTTGSTSNTSTTSIQPRTLQLSVSPPPPTSHVHNGSIGGNPA GSGAVNLRSPNSYTSYDNEDSLKEFDLVVSSRMHTSTPQYSVAKNGGANGYNNSSNVI GGGGNGGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKE IYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNMGKGSLWRVEPQQRQNL IQALNRSPFFPNSAVDKISPSLKSPGGGSAYDSVDGVASAVPPSSVVSSQPVGGGATG AGVLPAGVAAVALSSTPTKSNGLVALANGASQATSAARPHSPNGGGSGSHARFDPKLF PNLSKAFRNIREDSANGQPLLQDVLDDELSSGDYQNNNSKYGSNYVALNGGAATANGS GGGAATNGASDGINFERLARDCGADSMDDVHAAAAMLFLKHGPKAFSEPFQNGSAPVI TSSPSEDHTYSAGGNSNADSGSSTPLTNGNVLASVAQAVVQAQNNQGGGPGSDSNCAS SDAAYDSSEENHNITPEEMADRQRHRDGVDALLSLSRSSIVECGSVATTHYHSNGSSG SSHGSPHKRASSHSLEEEHLQQHREQQQQQHQQQHLQQQQQQQHLHQQFGSSQAVYTN GSGSKMALLSSAAANVALAQQQQQQQIHQQDLYTNSAAGHNASIYLSGLNNHCLPSVG GVSSAVAVGVAAAGMLPQHLSAAMVAAAAASKNKVKPLRGLRTKIKRKSAWMR" misc_feature 2337..2564 /gene="CHES-1-like" /note="Forkhead (FH) domain found in Forkhead box protein N2 (FOXN2) and similar proteins; Region: FH_FOXN2-like; cd20031" /db_xref="CDD:410805" misc_feature order(2352..2354,2406..2411,2418..2420,2475..2480, 2484..2489,2496..2498,2517..2519,2544..2552,2556..2558) /gene="CHES-1-like" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:410805" polyA_site 6603 /gene="CHES-1-like" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcttcattc gtttgcctgc tcgcgtgctt tacggttcga gattaacgag aaaatcttgt 61 aaaaaccttt ctgaaaacaa aaaattcaaa atcactcccc agtttcttaa actaaattaa 121 aaaaaaaaaa ctttgagtta catgagagca aaaaagcctt aaacaattgc ctaagcttgt 181 aatatttttt ttgcgtgcca ataaaacgac aacaaaactg cgagaacgcc ttgtatggag 241 gtatgtgaat ctgaatcaac acaaaataaa gataaataca aaataaaaga aaacaaaata 301 attaaaagcg ggccataaaa aaaaaacaga aaaaacaaag tgtgtgtttg tttgttggtg 361 tttgtgtcat gtccacagat aatcccacac agttgctgac cacccgcgat ttgagccaac 421 tgcgtggcca tctgcaatcc ggcgcagcgg tggcctccac ttcacccaca tcctcctctt 481 ctgtggtggc agcggcggcg tcagtggctg ccgcccatgg ataccgtacc attgcagctc 541 caccagcagt cacctcctcc tccgcctcct ccgcctgcag caccacatca gtagcatcag 601 cagcagcacc accacatata tcaacaagca atagcaacat gccggccagt gcctcgaaat 661 atgtatttct gcaacacaat cacaatggtg gcttcaccgc ctacgatggt tccactgctg 721 cggcgacaac gacgacgacg ggaagtcccg gcggtggcaa catagtgctc ctggcagcgg 781 agccactgga aatgggcacc gcggagacgc tggtcaatgt gcgaaccacc gacggcgatg 841 atggcgagct gcgttcgctg tcctggctca acgataccaa tctgatcaag ggcattgtga 901 ccaccacaac ggcggccggg caggcgggaa aacgtggtgc agtggccatt aagacgacga 961 cggcgggagg aggatcagta gcagctggag gatcaggagt tgcttgcata gtgagcgatt 1021 tcatagaaga gctgcccaca aatctgagtg agagcagcga acagcagcag gaggttggag 1081 tatcggcgtc atcgagtgga tcagcggctg tctacagcac cacaacggtg cacaagggag 1141 ccagtggcac caccacagtg gtggagtaca aagccagcaa ggcagcctcc aatcagcagc 1201 agcagcagca gcagcagacg ggctatttgc ccacgccaac gagaagtcat ggctatttgc 1261 cggtggtggt gagcagtgcc gccgttgccg tggccaatcc aactatactc tcctcctcgc 1321 ccgccaaaca gcagcagcaa cagcaacaga tttatgtgac cagcaatggg aatacaggag 1381 gaggaggatc aggaaccatc tacaaagcag ccacgccggc tttaagttcg ccaaccacca 1441 gcaacacaac cacccaccat ccgcacaaaa agtatctgcg cgagaagatg cacgtccaga 1501 tggatcacag cagtcatgtg gcctccaccg taacggtggt cagctcgccg gcctcctcga 1561 acaattcctc gataagcagc tccagccatg cgggatcggg aacgggatcc acaggatcgg 1621 gatcctcgac agcggccgta aatggtggca atagtccagt gcccaaggcc agtagcttta 1681 gcacagtctt cgaggcggtt aactatgcca catcagcggt taacaatagc aatagcaatg 1741 ggaatattac gcccagcagc caggcgatgc tccatggagt ccaggagaca ccgcaggctg 1801 tggtcaccac aacaaccttg ctgccgccgg gctatagctt tgtcaaccac gtggccagca 1861 cgccgcatgt catatccgcc ccagcacatg tcaactcacc ggagacgccg actggagctg 1921 ctctgttgcc gggaacttac tacaccacag gaagcactag taacacatct acaacctcca 1981 ttcagccacg cactctgcag ctatccgttt ccccgccgcc accaacgagt catgtgcaca 2041 atggatcaat aggaggaaat cctgctggat ctggagcagt taacctgcgc agtcccaaca 2101 gctataccag ctatgacaac gaggattcgc tcaaggaatt cgatctggtg gtcagctcaa 2161 ggatgcacac aagcacgccg caatattcgg tggccaagaa tggaggagcc aatggttata 2221 ataacagttc gaacgtgatt ggaggtggag gcaatggagg agcaggttcc aatacgccgc 2281 aaaagcagaa gcatcccaat aacgtgccat acgatccgct agtgcatacc aataacaagc 2341 cgccatatag ctttagctcc ctgattttca tggccatcga gggttcgaat gaaaaggcct 2401 tgcctgtgaa ggagatctac gcgtggattg ttcagcattt tccgtacttc aagacggcac 2461 cgaatggctg gaagaacagc gtgcgtcaca atctgtcgct gaacaagagc ttcgtgaaag 2521 tggagaaggc gccgaatatg ggcaagggtt cgttgtggcg cgtggagccg caacagcgcc 2581 agaatctcat ccaggcgctg aatcgatcgc ccttctttcc caactcggcg gtggacaaga 2641 tcagtccctc gctcaagagt cccggcggtg gatcggccta cgatagcgtc gatggtgtgg 2701 catcagcagt accgccttcc tcggttgtca gctcccaacc agttggaggt ggagcaacgg 2761 gagcaggagt tcttcccgcc ggggtcgctg ccgtggctct gtcctccacg cccacgaaaa 2821 gcaatggtct ggtggcgctg gccaacggcg ctagtcaggc cacgagtgca gccaggccgc 2881 acagtcccaa cggcggcggc agcggcagtc atgcccgctt cgatcccaag ctctttccca 2941 atctgtccaa ggcctttcga aatattcgcg aagattcggc caacggacag ccgctgctgc 3001 aagatgtcct cgatgatgag ctgtcctctg gggattatca gaataataat agcaagtatg 3061 gcagcaacta tgtggcctta aatggaggag ctgcaactgc aaatggcagc ggaggaggtg 3121 ccgccacaaa tggagcttcc gatggcatta atttcgagcg tctggcccgc gattgcggag 3181 cggacagcat ggacgatgtg catgcggcgg cggcgatgct cttcctcaaa cacggaccaa 3241 aggccttcag tgagcccttc cagaatggca gtgcaccggt gataacgagt tcccccagcg 3301 aggatcatac atattcagcg ggcggcaaca gcaatgcgga cagtggctcc tccacgccgc 3361 tgaccaatgg caatgttttg gccagcgtgg cgcaggccgt cgtccaggcc cagaataacc 3421 agggaggagg tcctggatcc gatagcaatt gcgccagctc ggatgccgcc tatgacagca 3481 gtgaggagaa tcacaacatc acgcccgagg agatggccga tcggcagcga catcgcgatg 3541 gcgtggacgc cctgctatcg ctttcccgct cctccattgt ggagtgcggc tcggtggcca 3601 ccactcatta tcacagcaac ggcagcagtg gcagcagtca cggttccccg cacaagcgag 3661 cctcgagtca cagcctggag gaggagcacc tgcagcagca cagggagcag cagcagcagc 3721 agcaccagca gcaacatctt cagcagcagc agcaacagca acacctccat cagcaatttg 3781 gcagcagtca ggcggtctac accaatggca gtggcagcaa gatggctcta ttgagcagtg 3841 cagctgccaa tgtggctctg gcccaacagc aacagcaaca gcagattcac cagcaggatc 3901 tatacaccaa ctcggcggcc gggcataatg ccagcatata tctgagtggg ctgaacaatc 3961 actgccttcc ctcggtgggc ggtgtgagct cggcggtggc ggtgggcgtg gcggcggcgg 4021 gcatgttgcc gcagcatttg agtgctgcca tggtggcggc ggcggcggca agcaaaaata 4081 aggtgaaacc cttgagggga ctgcgcacca agatcaagcg aaagtccgcc tggatgcggt 4141 gaatatggcg gcaggctggc ggcaaatgca cctaaaacag ccaaccggaa aaaagcacca 4201 accccccgcc cccctgcgac ctattgttgt ctctttctaa agcaaaaaaa aatattgttc 4261 aaatcacaga gcatttagac taaacaaatt tcgtaacctt aaattttttc ctttattttg 4321 ctctattttt tacaagtttt ttgtgtgttt tttatacccc tttccgtgtt tgttatacaa 4381 attactgact atttttttta tattattatt attattacta cattttttaa atttagccct 4441 aaatgtattt tttttttgac cttacctttt tgaaccgcaa ttgattgttg gccatttaac 4501 tattacatta ttaactatta attatatata tgatttacta gccatcctag ctgcaatttc 4561 ttataactct tagctgttaa gtgcaattat gatttttttt agcttgtaat tttaatttgt 4621 gcaaatattt tacagaccaa ttgaaagcga aaagatgaaa aacgagaaaa agttatagag 4681 tggaaaagtg ttccccgatc gttgttagct tttaaggcag aaatctagtt tattcgtttt 4741 aaattgcaaa atatgaggga cacaaactaa gtaaactttt ccagcgtatc agtgacaagg 4801 tttatatcaa aaaggaatag gaaaactaag cgataaacga aaacaacacc aacaaattga 4861 gctaagtaag aaaaatcaaa gaaaacatga aacaaaataa cgaaataaag caacaaaaaa 4921 aaattgtaaa aagcgcaaga aaaaggaaaa aagctagaaa acaaacaaag ttaagatcct 4981 ttttattttg gttatatgtg ccgcaagaaa atgtttttcc tacacttata agatccaaaa 5041 aacacaccct acttacaatg atctaaagag aaagcgatat aaaacatata caaaaatata 5101 taaaaatata tattatatat attatatata gaaagagagt tatttagaga aacttaagat 5161 aagccaagca agaaacccac aaaggaacac acatttagcg ccttatatat tgagtcctta 5221 gctaaaaaca aaagagagat ctgttgaaga attgtttgaa ctgctttgtt atacgaatgc 5281 atgagtaaat atatatatat atatatatta tataactaag gcccccctac tcttttcacc 5341 cccctcaagc aaatgttaaa tcaaagatat ttagttaata agtcaggaaa aacgaaaatc 5401 cttgttgtaa gcttcattta gatggttacg tagttgaaat gctaaacatt tgttaaaggg 5461 aaatcaaatc aaatccgtaa gctagccgat tttagttgaa tgaacctcca atcctacaat 5521 ccccaggtgt atatacagaa tacagagaat ggaataagcg aattagctgt tgaaattatg 5581 ctgcacatct ttacataggc atatttacat attgtggaaa ccaagaaata cttattaaca 5641 tttaaataag caaaaggaag aacgaacttg acaaagaacg ccctaagtgt atacacttca 5701 tgtacctttt tagcaaaaag caaaaacgca aaagcaaaga tcgcattaaa aattatataa 5761 atataaatat aaaaatatat atatttaaat taccacttac gaaactaaac taaatgttga 5821 tgtcaaagag aaaccaattt gctagttgtt aaaaacaaaa cagaaaaaaa agaaaatgtt 5881 aaaaatattt tgtttcctca agaacttatt attacgatta tggttttttg tttgttaatt 5941 ttagttcaat tacataagaa tattgccttg aagcatgtta aatggggaaa gaaatgtgac 6001 taaataccag aagcgagaac aacaaaataa ttgtatactt agctttaaac ttaaggtcct 6061 aaaaaaaaag gaaatagaaa tcccgaaaca cccccttttt ataaccatag ccccacaaac 6121 cctttgcaca cgacacacag tgaaagacaa tcgccgcccg tgttgttgtt gtcgttgtct 6181 cgcttaagtt taaacaaatt ctatgtagct atagacacct acgagtaatg agtaatatat 6241 atatgcataa attacagaca gcaatagcaa agtacataca tatacgacaa atattgttat 6301 gcaaccttaa gctttagccg agaaaggtgg ataactatct tcccgatccc gaatcctata 6361 tcctatatcc cgtatcccct atatcttcta tatctccccc aaaacaacaa acaaccgatg 6421 agctaaccag ttttgttaac gtgttttttc ttctatttta attattatat cgcatcatta 6481 ttattattat tattattacc gtatatatac atgctggtat atattactta tatatttaat 6541 tgattataca actttttttg cgtaccaaat acacaccaat caaaatgtga aatattttct 6601 tta