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LOCUS XM_070218296 6418 bp mRNA linear INV 09-DEC-2024 (CHES-1-like), transcript variant X1, mRNA. ACCESSION XM_070218296 VERSION XM_070218296.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6418 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6418 /gene="CHES-1-like" /note="Checkpoint suppressor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060311" CDS 184..3957 /gene="CHES-1-like" /codon_start=1 /product="uncharacterized protein CHES-1-like isoform X1" /protein_id="XP_070074397.1" /db_xref="GeneID:108060311" /translation="MSTDNPTQLLTTRDLSQLRGHLQSGAAVASTSPTSSSSVVAAAA SVAAAHGYRTIAAPPAVTSSSASSACSTTSVASAAAPPHISTSNSNMPASASKYVFLQ HNHNGGFTAYDGSTAAATTTTTGSPGGGNIVLLAAEPLEMGTAETLVNVRTTDGDDGE LRSLSWLNDTNLIKGIVTTTTAAGQAGKRGAVAIKTTTAGGGSVAAGGSGVACIVSDF IEELPTNLSESSEQQQEVGVSASSSGSAAVYSTTTVHKGASGTTTVVEYKASKAASNQ QQQQQQQTGYLPTPTRSHGYLPVVVSSAAVAVANPTILSSSPAKQQQQQQQIYVTSNG NTGGGGSGTIYKAATPALSSPTTSNTTTHHPHKKYLREKMHVQMDHSSHVASTVTVVS SPASSNNSSISSSSHAGSGTGSTGSGSSTAAVNGGNSPVPKASSFSTVFEAVNYATSA VNNSNSNGNITPSSQAMLHGVQETPQAVVTTTTLLPPGYSFVNHVASTPHVISAPAHV NSPETPTGAALLPGTYYTTGSTSNTSTTSIQPRTLQLSVSPPPPTSHVHNGSIGGNPA GSGAVNLRSPNSYTSYDNEDSLKEFDLVVSSRMHTSTPQYSVAKNGGANGYNNSSNVI GGGGNGGAGSNTPQKQKHPNNVPYDPLVHTNNKPPYSFSSLIFMAIEGSNEKALPVKE IYAWIVQHFPYFKTAPNGWKNSVRHNLSLNKSFVKVEKAPNMGKGSLWRVEPQQRQNL IQALNRSPFFPNSAVDKISPSLKSPGGGSAYDSVDGVASAVPPSSVVSSQPVGGGATG AGVLPAGVAAVALSSTPTKSNGLVALANGASQATSAARPHSPNGGGSGSHARFDPKLF PNLSKAFRNIREDSANGQPLLQDVLDDELSSGDYQNNNSKYGSNYVALNGGAATANGS GGGAATNGASDGINFERLARDCGADSMDDVHAAAAMLFLKHGPKAFSEPFQNGSAPVI TSSPSEDHTYSAGGNSNADSGSSTPLTNGNVLASVAQAVVQAQNNQGGGPGSDSNCAS SDAAYDSSEENHNITPEEMADRQRHRDGVDALLSLSRSSIVECGSVATTHYHSNGSSG SSHGSPHKRASSHSLEEEHLQQHREQQQQQHQQQHLQQQQQQQHLHQQFGSSQAVYTN GSGSKMALLSSAAANVALAQQQQQQQIHQQDLYTNSAAGHNASIYLSGLNNHCLPSVG GVSSAVAVGVAAAGMLPQHLSAAMVAAAAASKNKVKPLRGLRTKIKRKSAWMR" misc_feature 2152..2379 /gene="CHES-1-like" /note="Forkhead (FH) domain found in Forkhead box protein N2 (FOXN2) and similar proteins; Region: FH_FOXN2-like; cd20031" /db_xref="CDD:410805" misc_feature order(2167..2169,2221..2226,2233..2235,2290..2295, 2299..2304,2311..2313,2332..2334,2359..2367,2371..2373) /gene="CHES-1-like" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:410805" polyA_site 6418 /gene="CHES-1-like" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 catttttttg cctttcagcg cagcggacgt aaatatactt attaacaaaa agaaaataag 61 aagaaaccct taaacaataa actgcaataa gtaaacatca gcaaaaaaag aaaaagactc 121 acaaacaaag caaagaaaac aaacaaaacg tcgtcgttga tgaagcaaaa ataattgagt 181 agcatgtcca cagataatcc cacacagttg ctgaccaccc gcgatttgag ccaactgcgt 241 ggccatctgc aatccggcgc agcggtggcc tccacttcac ccacatcctc ctcttctgtg 301 gtggcagcgg cggcgtcagt ggctgccgcc catggatacc gtaccattgc agctccacca 361 gcagtcacct cctcctccgc ctcctccgcc tgcagcacca catcagtagc atcagcagca 421 gcaccaccac atatatcaac aagcaatagc aacatgccgg ccagtgcctc gaaatatgta 481 tttctgcaac acaatcacaa tggtggcttc accgcctacg atggttccac tgctgcggcg 541 acaacgacga cgacgggaag tcccggcggt ggcaacatag tgctcctggc agcggagcca 601 ctggaaatgg gcaccgcgga gacgctggtc aatgtgcgaa ccaccgacgg cgatgatggc 661 gagctgcgtt cgctgtcctg gctcaacgat accaatctga tcaagggcat tgtgaccacc 721 acaacggcgg ccgggcaggc gggaaaacgt ggtgcagtgg ccattaagac gacgacggcg 781 ggaggaggat cagtagcagc tggaggatca ggagttgctt gcatagtgag cgatttcata 841 gaagagctgc ccacaaatct gagtgagagc agcgaacagc agcaggaggt tggagtatcg 901 gcgtcatcga gtggatcagc ggctgtctac agcaccacaa cggtgcacaa gggagccagt 961 ggcaccacca cagtggtgga gtacaaagcc agcaaggcag cctccaatca gcagcagcag 1021 cagcagcagc agacgggcta tttgcccacg ccaacgagaa gtcatggcta tttgccggtg 1081 gtggtgagca gtgccgccgt tgccgtggcc aatccaacta tactctcctc ctcgcccgcc 1141 aaacagcagc agcaacagca acagatttat gtgaccagca atgggaatac aggaggagga 1201 ggatcaggaa ccatctacaa agcagccacg ccggctttaa gttcgccaac caccagcaac 1261 acaaccaccc accatccgca caaaaagtat ctgcgcgaga agatgcacgt ccagatggat 1321 cacagcagtc atgtggcctc caccgtaacg gtggtcagct cgccggcctc ctcgaacaat 1381 tcctcgataa gcagctccag ccatgcggga tcgggaacgg gatccacagg atcgggatcc 1441 tcgacagcgg ccgtaaatgg tggcaatagt ccagtgccca aggccagtag ctttagcaca 1501 gtcttcgagg cggttaacta tgccacatca gcggttaaca atagcaatag caatgggaat 1561 attacgccca gcagccaggc gatgctccat ggagtccagg agacaccgca ggctgtggtc 1621 accacaacaa ccttgctgcc gccgggctat agctttgtca accacgtggc cagcacgccg 1681 catgtcatat ccgccccagc acatgtcaac tcaccggaga cgccgactgg agctgctctg 1741 ttgccgggaa cttactacac cacaggaagc actagtaaca catctacaac ctccattcag 1801 ccacgcactc tgcagctatc cgtttccccg ccgccaccaa cgagtcatgt gcacaatgga 1861 tcaataggag gaaatcctgc tggatctgga gcagttaacc tgcgcagtcc caacagctat 1921 accagctatg acaacgagga ttcgctcaag gaattcgatc tggtggtcag ctcaaggatg 1981 cacacaagca cgccgcaata ttcggtggcc aagaatggag gagccaatgg ttataataac 2041 agttcgaacg tgattggagg tggaggcaat ggaggagcag gttccaatac gccgcaaaag 2101 cagaagcatc ccaataacgt gccatacgat ccgctagtgc ataccaataa caagccgcca 2161 tatagcttta gctccctgat tttcatggcc atcgagggtt cgaatgaaaa ggccttgcct 2221 gtgaaggaga tctacgcgtg gattgttcag cattttccgt acttcaagac ggcaccgaat 2281 ggctggaaga acagcgtgcg tcacaatctg tcgctgaaca agagcttcgt gaaagtggag 2341 aaggcgccga atatgggcaa gggttcgttg tggcgcgtgg agccgcaaca gcgccagaat 2401 ctcatccagg cgctgaatcg atcgcccttc tttcccaact cggcggtgga caagatcagt 2461 ccctcgctca agagtcccgg cggtggatcg gcctacgata gcgtcgatgg tgtggcatca 2521 gcagtaccgc cttcctcggt tgtcagctcc caaccagttg gaggtggagc aacgggagca 2581 ggagttcttc ccgccggggt cgctgccgtg gctctgtcct ccacgcccac gaaaagcaat 2641 ggtctggtgg cgctggccaa cggcgctagt caggccacga gtgcagccag gccgcacagt 2701 cccaacggcg gcggcagcgg cagtcatgcc cgcttcgatc ccaagctctt tcccaatctg 2761 tccaaggcct ttcgaaatat tcgcgaagat tcggccaacg gacagccgct gctgcaagat 2821 gtcctcgatg atgagctgtc ctctggggat tatcagaata ataatagcaa gtatggcagc 2881 aactatgtgg ccttaaatgg aggagctgca actgcaaatg gcagcggagg aggtgccgcc 2941 acaaatggag cttccgatgg cattaatttc gagcgtctgg cccgcgattg cggagcggac 3001 agcatggacg atgtgcatgc ggcggcggcg atgctcttcc tcaaacacgg accaaaggcc 3061 ttcagtgagc ccttccagaa tggcagtgca ccggtgataa cgagttcccc cagcgaggat 3121 catacatatt cagcgggcgg caacagcaat gcggacagtg gctcctccac gccgctgacc 3181 aatggcaatg ttttggccag cgtggcgcag gccgtcgtcc aggcccagaa taaccaggga 3241 ggaggtcctg gatccgatag caattgcgcc agctcggatg ccgcctatga cagcagtgag 3301 gagaatcaca acatcacgcc cgaggagatg gccgatcggc agcgacatcg cgatggcgtg 3361 gacgccctgc tatcgctttc ccgctcctcc attgtggagt gcggctcggt ggccaccact 3421 cattatcaca gcaacggcag cagtggcagc agtcacggtt ccccgcacaa gcgagcctcg 3481 agtcacagcc tggaggagga gcacctgcag cagcacaggg agcagcagca gcagcagcac 3541 cagcagcaac atcttcagca gcagcagcaa cagcaacacc tccatcagca atttggcagc 3601 agtcaggcgg tctacaccaa tggcagtggc agcaagatgg ctctattgag cagtgcagct 3661 gccaatgtgg ctctggccca acagcaacag caacagcaga ttcaccagca ggatctatac 3721 accaactcgg cggccgggca taatgccagc atatatctga gtgggctgaa caatcactgc 3781 cttccctcgg tgggcggtgt gagctcggcg gtggcggtgg gcgtggcggc ggcgggcatg 3841 ttgccgcagc atttgagtgc tgccatggtg gcggcggcgg cggcaagcaa aaataaggtg 3901 aaacccttga ggggactgcg caccaagatc aagcgaaagt ccgcctggat gcggtgaata 3961 tggcggcagg ctggcggcaa atgcacctaa aacagccaac cggaaaaaag caccaacccc 4021 ccgcccccct gcgacctatt gttgtctctt tctaaagcaa aaaaaaatat tgttcaaatc 4081 acagagcatt tagactaaac aaatttcgta accttaaatt ttttccttta ttttgctcta 4141 ttttttacaa gttttttgtg tgttttttat acccctttcc gtgtttgtta tacaaattac 4201 tgactatttt ttttatatta ttattattat tactacattt tttaaattta gccctaaatg 4261 tatttttttt ttgaccttac ctttttgaac cgcaattgat tgttggccat ttaactatta 4321 cattattaac tattaattat atatatgatt tactagccat cctagctgca atttcttata 4381 actcttagct gttaagtgca attatgattt tttttagctt gtaattttaa tttgtgcaaa 4441 tattttacag accaattgaa agcgaaaaga tgaaaaacga gaaaaagtta tagagtggaa 4501 aagtgttccc cgatcgttgt tagcttttaa ggcagaaatc tagtttattc gttttaaatt 4561 gcaaaatatg agggacacaa actaagtaaa cttttccagc gtatcagtga caaggtttat 4621 atcaaaaagg aataggaaaa ctaagcgata aacgaaaaca acaccaacaa attgagctaa 4681 gtaagaaaaa tcaaagaaaa catgaaacaa aataacgaaa taaagcaaca aaaaaaaatt 4741 gtaaaaagcg caagaaaaag gaaaaaagct agaaaacaaa caaagttaag atccttttta 4801 ttttggttat atgtgccgca agaaaatgtt tttcctacac ttataagatc caaaaaacac 4861 accctactta caatgatcta aagagaaagc gatataaaac atatacaaaa atatataaaa 4921 atatatatta tatatattat atatagaaag agagttattt agagaaactt aagataagcc 4981 aagcaagaaa cccacaaagg aacacacatt tagcgcctta tatattgagt ccttagctaa 5041 aaacaaaaga gagatctgtt gaagaattgt ttgaactgct ttgttatacg aatgcatgag 5101 taaatatata tatatatata tattatataa ctaaggcccc cctactcttt tcacccccct 5161 caagcaaatg ttaaatcaaa gatatttagt taataagtca ggaaaaacga aaatccttgt 5221 tgtaagcttc atttagatgg ttacgtagtt gaaatgctaa acatttgtta aagggaaatc 5281 aaatcaaatc cgtaagctag ccgattttag ttgaatgaac ctccaatcct acaatcccca 5341 ggtgtatata cagaatacag agaatggaat aagcgaatta gctgttgaaa ttatgctgca 5401 catctttaca taggcatatt tacatattgt ggaaaccaag aaatacttat taacatttaa 5461 ataagcaaaa ggaagaacga acttgacaaa gaacgcccta agtgtataca cttcatgtac 5521 ctttttagca aaaagcaaaa acgcaaaagc aaagatcgca ttaaaaatta tataaatata 5581 aatataaaaa tatatatatt taaattacca cttacgaaac taaactaaat gttgatgtca 5641 aagagaaacc aatttgctag ttgttaaaaa caaaacagaa aaaaaagaaa atgttaaaaa 5701 tattttgttt cctcaagaac ttattattac gattatggtt ttttgtttgt taattttagt 5761 tcaattacat aagaatattg ccttgaagca tgttaaatgg ggaaagaaat gtgactaaat 5821 accagaagcg agaacaacaa aataattgta tacttagctt taaacttaag gtcctaaaaa 5881 aaaaggaaat agaaatcccg aaacaccccc tttttataac catagcccca caaacccttt 5941 gcacacgaca cacagtgaaa gacaatcgcc gcccgtgttg ttgttgtcgt tgtctcgctt 6001 aagtttaaac aaattctatg tagctataga cacctacgag taatgagtaa tatatatatg 6061 cataaattac agacagcaat agcaaagtac atacatatac gacaaatatt gttatgcaac 6121 cttaagcttt agccgagaaa ggtggataac tatcttcccg atcccgaatc ctatatccta 6181 tatcccgtat cccctatatc ttctatatct cccccaaaac aacaaacaac cgatgagcta 6241 accagttttg ttaacgtgtt ttttcttcta ttttaattat tatatcgcat cattattatt 6301 attattatta ttaccgtata tatacatgct ggtatatatt acttatatat ttaattgatt 6361 atacaacttt ttttgcgtac caaatacaca ccaatcaaaa tgtgaaatat tttcttta