Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218295 1811 bp mRNA linear INV 09-DEC-2024 intermediate compartment protein 2 (LOC108058162), mRNA. ACCESSION XM_070218295 VERSION XM_070218295.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1811 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1811 /gene="LOC108058162" /note="endoplasmic reticulum-Golgi intermediate compartment protein 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108058162" CDS 268..1596 /gene="LOC108058162" /codon_start=1 /product="endoplasmic reticulum-Golgi intermediate compartment protein 2" /protein_id="XP_070074396.1" /db_xref="GeneID:108058162" /translation="MTATLRYRGDKSNLLELAKNLDAFKKVPEKYTETTEIGGTLSLL SRLLIVYLVYTELHYYWHETDIVYQFQPDIALDEQIQMHVDITVAMPCASLSGVDLMD ETQQDVFAYGTLQREGVWWEMSEQERLQFEAIQIQNHYLREQFHSVADVLFKDIIRDP HPGRESPSQAPAAPPPGALDLFQLHQPDHQANGQPENKFDACRLHGTLGINKVAGVLH LVGGAQPVVGLFEDHWMIELRRMPANFTHRINRLSFGQYSRRIVQPLEGDETIIQEEA TTVQYFLKIVPTEIQQTFSTINTFQYSVTENVRKLDSERNSYGSPGIYFKYDWSALKI VVGNDRDYLATFAIRLCSIISGIIVISGAINSLLLGLQRRLLRTFAPELYHRLASAKP ANPSAAPSTAAAPAPPPPVNELLHTANLMASVDISAYLPTAAPPKLKSGL" misc_feature 322..585 /gene="LOC108058162" /note="Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); Region: ERGIC_N; pfam13850" /db_xref="CDD:464000" misc_feature <871..1320 /gene="LOC108058162" /note="Endoplasmic reticulum vesicle transporter; Region: COPIIcoated_ERV; pfam07970" /db_xref="CDD:462327" polyA_site 1811 /gene="LOC108058162" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cccaacagct gttttcccta ccggctgtaa ataaatcgtg gaaattccac aatctttgtt 61 tgtcctacgc caccacccac taactgggct tgatgagaat cagcaactaa cccaggagcc 121 aggagccaca cacgccctta caaacgcaca ttccatattc ccggggaggc ggcagcagcc 181 atacatcgcg ggagggggcg tggcggtgcc cggcgagctt cggacaatct cagcgacaat 241 tgcaatctca gatcccgccc aaccgagatg acggccacgt tgcgttaccg cggcgacaag 301 agcaatctgc tggagctggc caagaatctg gatgccttca agaaggtgcc ggaaaagtac 361 acagagacga cggaaatcgg agggacacta tccctgctga gccgcctgtt gatcgtgtac 421 ctggtctaca cggaactcca ctactactgg cacgaaacgg acattgtcta ccagttccag 481 ccggacatcg ccctggacga acagatccag atgcatgtgg acatcacggt ggccatgccc 541 tgcgcctcgc tctccggcgt ggatctgatg gacgagacgc agcaggatgt gttcgcctac 601 gggacgctgc agcgcgaggg cgtctggtgg gagatgtccg agcaggagcg actgcagttc 661 gaggccatcc agatccagaa tcactatctg cgcgagcagt tccactcggt ggccgatgtg 721 ctcttcaagg acatcatcag ggatccgcat ccgggccggg agagtccctc gcaggcgccc 781 gccgctcctc cgcccggcgc cctcgatctc ttccagctgc atcagccaga ccatcaggcg 841 aatggccagc cggagaacaa gttcgatgcc tgccggctgc acggtacgct gggcatcaac 901 aaggtggccg gagtgctgca tctcgtggga ggagctcagc cggtggtggg actcttcgag 961 gaccactgga tgatcgagct gcgacggatg ccggcgaact tcacgcaccg catcaaccgc 1021 ctgagcttcg ggcagtactc gcggcggatt gtgcagccgc tggagggcga tgagaccatc 1081 atccaggagg aggccaccac cgtgcagtac ttcctcaaga tcgtgcccac cgagatccaa 1141 cagaccttca gcaccatcaa cacgtttcag tactccgtca ccgagaatgt gcggaagcta 1201 gattccgaac gcaattcgta tggctcccct ggcatttact tcaagtacga ctggtcggcc 1261 ctcaagattg tggtgggcaa cgaccgcgac tacctggcca ccttcgccat ccgcctgtgc 1321 tcgatcatct ccggcatcat agtcatctcg ggggccatca actcgctgct cctgggcctg 1381 cagcgccgcc tgctgcgcac ctttgccccg gagctgtacc accggctggc cagcgccaag 1441 ccagcgaatc cctcggctgc tccttcgact gctgctgctc ccgctcctcc gccgcccgtc 1501 aacgagctcc tgcacacggc caacctgatg gccagcgtcg acatctcggc ctatctgccc 1561 acggcggcgc cgccgaagct caaatccggc ctctaaccct ttgggtagca caaatctcag 1621 taaccgaagc ttcccctcgt cttacctttg atctggtcat gttggaggag tgcgaagtgc 1681 ttgccaggaa ttcagggaga cgcaacacct tctctttaaa ctaatttctt gtttattctt 1741 tcattaagat acgaaaaaaa aagcacacac aaatatggca agaatgttgt acataaatat 1801 tgataagcac a