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LOCUS XM_070218292 5682 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_070218292 VERSION XM_070218292.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5682 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5682 /gene="pod1" /note="coronin pod1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068133" CDS 301..3561 /gene="pod1" /codon_start=1 /product="coronin-7 isoform X3" /protein_id="XP_070074393.1" /db_xref="GeneID:108068133" /translation="MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGA FMAFNWEHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDC LVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAAGCVALFDLST QKEIFSNNEHPEVIQSASWREDGSVLATSCKDKCVRIFDPRAAGSPIQLTAESHQSIK DSRVVWLGNQQRILTTGFDAARLRQVIIRDVRNFSTPEKTLELDCSTGILMPLFDPDT NMLFLAGKGDTTINYLEITDKDPYLIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVL QLTSNMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPA KREHGDEPIIPRLGPKPFSSTTGDVSFDKVFAVPLAPGSHENISNVGQESGVAELIPP AQGPKPDLIVEIEIKKKHEREPVVGGNGVQKSLTTSERRKSSADDDESSDKIFEQSSE SSENSAEGEDRTDADLRRSCSSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREHSKV EPLKPSQQQQQQQIDTKRISVPEGKLMEEHRRGNGAAGLKKSATEAAFSAASTKRTST VFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHANQERVAVPLSGPGGKIA IFELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLAVACDDGIVKLWHIEAGGLSE PTNSPAGELTAHLDKIYFIRFHPLAADVLLTASYDMTIKLWDLRTMSEKCSLSGHTDQ IFDFAWSPCGRLGASVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYIV CTGFDKVSERQISVYNAQKLSTPLNTASLDVSPSILIPYYDEDSSTLFVTGKGDSTIY CYEITDEEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSFT VPRIKSELFQDDLFPPTRITWSATLSAEDWFASNDKAAPKVSLKPEGMETLSSIQQVP AQPVKKPDHPQFGGQKSEFEINKQQEIQKSVSARMEFTTKLEQDDMEGVDENEWQE" misc_feature 307..501 /gene="pod1" /note="Domain of unknown function (DUF1899); Region: DUF1899; pfam08953" /db_xref="CDD:462645" misc_feature 409..>1467 /gene="pod1" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature 547..681 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 694..798 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 820..930 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 949..1080 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1099..1182 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2185..>3339 /gene="pod1" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature order(2314..2316,2332..2334,2350..2355,2404..2409, 2461..2463,2473..2475,2491..2496,2551..2556,2608..2610, 2623..2625,2641..2646,2683..2685,2734..2736,2749..2751, 2767..2772,2809..2814,2869..2871,2881..2883,2911..2916, 3013..3015,3028..3030,3046..3051,3082..3087) /gene="pod1" /note="structural tetrad [active]" /db_xref="CDD:238121" misc_feature 2410..2529 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2569..2679 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2695..2808 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2830..2952 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2971..3042 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" polyA_site 5682 /gene="pod1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aattagtatc ttttgcccga tttttctcag ggattttccg gtatttatat actgccaaaa 61 ataccacagc cgacttgaaa tttaaattgt gctcggatta attgtggtcc cgagttgaaa 121 cgcaactgga gaggaagagg gagaggatag ccgagcgaaa gagagcgact ggcctatacc 181 atatagcata tacaatccac attctatact ccgcactcga gcagcgaaca tccagtgtcc 241 acatccgcat cggatcgcct tcaccatcgc catcacatcg cggagcagca accagtaatt 301 atggcctggc gattcaaggc ttccaagtac aaaaatgccg cacccattgt gcccaaggcg 361 gaggcctgcg tccgcgagat ctgcgtgggc agctaccaga cctacgggaa taatatcgcc 421 gcctccggcg ccttcatggc cttcaactgg gagcacaccg gttccagtgt ggccgtcctc 481 ccgctggacg attgcgggcg gaagagcaag accatgccgc tgctccacgg gcacacggac 541 acagtgacgg acctcaagtt ctcgccgttc cacgacggac tgctggccac cgcctcgcag 601 gattgcctgg ttaagatctg gcacataccg gaaaagggtc tggagcagtc gctctccgat 661 ccggaggcca tcttctcaca caagcagcgt cgcgtggaga cagtgggctt ccatccgacg 721 gccgatggcc tgatgtactc cacagccgcc ggctgtgtgg ccctcttcga tctcagcacc 781 caaaaggaga tcttctcgaa caatgagcac ccggaggtga tacagtcggc cagttggcgc 841 gaggatggct ccgttttggc caccagctgc aaggacaagt gcgtgcgtat cttcgatccc 901 cgagccgccg gttcgcccat ccagttgacc gccgaatcgc accagagcat caaggattcg 961 cgcgtcgtct ggctgggcaa tcagcagcgc atcctgacca ccggtttcga tgccgcccgc 1021 ctgcgtcagg tgatcatccg cgatgtgcgc aacttcagca cgcccgaaaa gaccctcgaa 1081 ctggactgct ccacgggcat tctaatgccg ctcttcgatc ccgacacgaa tatgctcttc 1141 ctggccggca agggcgatac gacgattaac tatctggaga ttacggacaa ggatccgtat 1201 ttgattgagg gactgcgtca caccggcgag cagacgaagg gcgcctgtct ggtgcccaag 1261 cgggcgctca aggtcatgga ggcggaggtc aaccgagtgc tgcagctgac ctctaacatg 1321 gtcataccca ttatgtacca ggtgcccagg aagacatatc gcgatttcca tgccgatctc 1381 tatccggaga ccacgggcta caagacggaa ctggtggccg gcgaatggct gaatggcagc 1441 aaccaggcgg tgcccaagat gagcctcgat cccgccaagc gcgagcatgg cgatgagcca 1501 attattccac gtttgggccc gaagcccttc tccagcacca cgggtgacgt gtcgttcgac 1561 aaggtgttcg ccgttcccct ggcgccggga tcccatgaga acatctcgaa cgtgggccag 1621 gaaagcggag tggcggagct gatcccgccc gcccaggggc caaagccaga tctcattgtg 1681 gaaatcgaaa tcaaaaagaa acacgaaagg gagcctgtgg tgggcggaaa tggagtccag 1741 aaatcgctaa ccacctcgga gcgtcgcaag tcctcggctg acgatgatga atcatccgat 1801 aagatattcg agcagagctc cgagtcgtcg gagaattcgg cggagggcga agatcgcacg 1861 gatgcggatc tgcgacgcag ctgctcctcg aggagcagct ttgccgagag gcggcgcatc 1921 tacgagaatc gctccaagag tcaggtggac gaaaagcccc agtcgccagt gccattgcgt 1981 cgcgagcact ccaaagtgga gccactgaag cccagtcaac agcagcagca gcagcagatc 2041 gacaccaagc gcatttcggt gccggagggc aaactaatgg aggagcatcg ccgcgggaat 2101 ggcgccgccg gtttgaagaa atccgccacg gaggcggcct tcagtgcggc cagcaccaag 2161 cgcacctcca ccgtcttcgg caaggtgtcc aagttcaggc atttgaaggg cactcccggc 2221 cacaagtcga cgcacatcga gaatttgcgc aatctgagcc gccagatacc gggcgaatgc 2281 aatggcttcc atgccaacca ggagcgcgtg gcggttcccc tctccggacc cggcggcaag 2341 atagccatct tcgagttgag ccgaccggga cgactgccgg atggcgtgat tccatcgctt 2401 gtgaacggca gcaacatcat ggacttccag tgggatccct tcgatgccca gcgtttggcc 2461 gtcgcctgcg acgatggcat cgtgaagctc tggcacatcg aagccggcgg actgagtgag 2521 ccgacaaatt cgccagccgg cgagctgacc gctcacctgg acaagatcta ctttatccgt 2581 ttccatccgc tggccgccga cgttctgctg accgccagct acgatatgac catcaagctg 2641 tgggatttgc gcaccatgag cgagaagtgc tcgctgtcgg ggcacacgga tcagatcttt 2701 gacttcgcct ggagtccctg cggccgtttg ggcgccagcg tgtgcaagga tggcaagatt 2761 agggtctaca atccgaggaa atcggagacg cccatcaggg agggcaatgg accggtggga 2821 actcgaggag ctcgcatcac ctgggcgctg gaggggcact acatagtctg cactggattt 2881 gataaggttt ccgagcgaca gattagcgtg tacaatgccc aaaagctgtc gacgccattg 2941 aacacggcca gtttggatgt gtcgccctcg atattgatac cctactacga cgaggacagc 3001 tccacgctgt tcgtcaccgg caagggcgac tcgaccatct actgctacga gatcaccgac 3061 gaggagccgt acatctgccc gctgtcgcac catcgctgca cctcgctgca ccagggcctc 3121 agcttcctca ccaagaacca ctgcgatgtg gccagcgtgg agttctcgaa ggcctatcgg 3181 ctgaccaata ccaccatcga gccgctaagc ttcacagtgc cccgcattaa gagcgagctg 3241 ttccaagacg atctgttccc acccacacgc atcacctgga gcgccacgct aagcgccgag 3301 gactggtttg ccagcaacga taaggcggca cccaaggtca gcttgaagcc ggagggcatg 3361 gagacattat cttccataca gcaagtgcca gcgcagcctg tgaagaaacc ggatcatccc 3421 cagttcggcg gtcagaagtc ggaattcgag atcaacaaac agcaggagat ccagaaatcg 3481 gttagcgcgc gcatggagtt caccaccaag ctggagcagg acgacatgga gggcgtggac 3541 gagaacgagt ggcaggagta gcagtgcagc cagcgtctgc ggcggacatg aatcagttca 3601 caatttagcg tttaaccaat gggcgtaact ctttttttta ccaatctaga catgacagca 3661 gcagaagcaa cagcaaaagt gctcgacata aacataaaca acatatatat acttgtgggc 3721 gagcgtatat agagaactcg tagttaagcc gaaagtaaaa ctaacacaac acacgacatc 3781 ctcatccctc gatcctcatt cctcgatcct cgtcagaatc ccagcattta gttcctcgct 3841 cctccgccaa tttactgcag ttgctcaata attgccaaat tacaaatcat aagccagttt 3901 tgttcgtttt gtttgtgttg tttttttttt aaatctatat attttgtgtg tattaatttt 3961 ttttataatt tacccataca tatattttgt gttttttatg tgtgctattt aagtagttag 4021 tccaaaatta gtttagccta cttaggtgtt tacacttacg attaatttcc tgggttctcc 4081 ccgagtcctt cagtttgtgt ggccatatat gtataggata tatggaagga cttagatgat 4141 actactttta catatacgca tatgtatttc cctctcagtt tgtttcatgt ctgcatgcat 4201 gcgagtgagt gagtgagaga gcgagagagt gtgtgtctgt ccccctcttt cgcattattt 4261 caccccctgt aatcctgtaa tcccagacac cttttcattc ccccatccaa gacaagaaac 4321 taaaacatat agactgtagc caaaaaatat ttgctgagaa ttacaatcaa gcgagacaag 4381 acaatttttg tactgtataa tgcgtaaatc aaacatactg caacagccga atcaaaccga 4441 aaagacatgc aaacaacaat tccaaaatgt ataacgaaaa gacttgaaca gatctgaatg 4501 gatctccatc ctctgaatat cctgcacccc cgaaaaaatc ccctactaac ccgaaaaagg 4561 aaagtaataa gttgccattg aaatgcgttt ataaaaaagt gaaaaatgaa aaaaggcaat 4621 agaacgtaac tcgagtagca tacccatagg caataacgtt ttgtacttgc aatagaatat 4681 acacatttac acatatatat acacgatata tatatagtat atattttgta taccaatcgt 4741 aactgaaaac caaggccaac ttccggctga aacgactgaa ctgatccaac agcataatag 4801 cgaatagagt ggcaaatcta taaaaatctt tcgaaaacaa aacaagaaca acataacaga 4861 ccagaccaat tctcgggtaa cgggcaatat tgtgctagac aaggttctat tatacagatt 4921 atatatacac acacatacca tacgcatagt tataggcata taaacgtcgc aaagccaatt 4981 ctatattcca tattccaatt caaaatcaaa ctccaagctg catttaaatc caaacgccat 5041 ggaacgactg acaaaagtat tcgcttaaca ttctgatctg atctgatcct cgactagtac 5101 ttatatgtca gagattatcc caaaaagaag acgaatttcc agaggtctgt ggatatggaa 5161 tcgatttaga tcggggaaac aaagggatcg cagttctata atgtcctccc cccccaaaca 5221 aaatcccatt ccaaattccc cgaaccgacc gcccgcagat attatgtcat tctgtattta 5281 ttagccatat tcgattacga ttttcgaacg tctctcttat ttatatttat atttatatat 5341 atctataaca ataccaatat acgaaaatac aacttcaagc gatatataat acgatgataa 5401 acgagtgaag gacgacgatt gattgattga cgattcacga ttgacgagtg tgtaggcaga 5461 gagtgaagta gagaagaagt aggatgcaga agcatcggca gaaggagcag aatcggaatc 5521 agaagcatac acattattta tacaatttat tttacagtac gagtatatcc gataaccccc 5581 atccgatact ctagcactaa gttataatta caataataat aatgaaggca aaaatatatt 5641 tatatacata attcaataaa aaaaacaagc gaaaaatata aa