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LOCUS XM_070218291 6198 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218291 VERSION XM_070218291.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6198 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6198 /gene="pod1" /note="coronin pod1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068133" CDS 301..4077 /gene="pod1" /codon_start=1 /product="coronin-7 isoform X2" /protein_id="XP_070074392.1" /db_xref="GeneID:108068133" /translation="MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGA FMAFNWEHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDC LVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAAGCVALFDLST QKEIFSNNEHPEVIQSASWREDGSVLATSCKDKCVRIFDPRAAGSPIQLTAESHQSIK DSRVVWLGNQQRILTTGFDAARLRQVIIRDVRNFSTPEKTLELDCSTGILMPLFDPDT NMLFLAGKGDTTINYLEITDKDPYLIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVL QLTSNMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPA KREHGDEPIIIHRGNLSDFVKNLENQRAKSQTTAAKRNDNEHFVMLNKGNNFEEKNGN DNSSESNGKKSTASQSQQSQPDGECSELIRKFEAKYKVDSEKEKAANAYAQSQEDDKE SPTEQEHSTGSSEEHSSHSSGGGMDNHSASGSHSPPKPMPRTSRNNSLPEASDSAGES SSTTTPRPRPRTTAASAYKPRLGPKPFSSTTGDVSFDKVFAVPLAPGSHENISNVGQE SGVAELIPPAQGPKPDLIVEIEIKKKHEREPVVGGNGVQKSLTTSERRKIFEQSSESS ENSAEGEDRTDADLRRSCSSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREHSKVEP LKPSQQQQQQQIDTKRISVPEGKLMEEHRRGNGAAGLKKSATEAAFSAASTKRTSTVF GKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHANQERVAVPLSGPGGKIAIF ELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLAVACDDGIVKLWHIEAGGLSEPT NSPAGELTAHLDKIYFIRFHPLAADVLLTASYDMTIKLWDLRTMSEKCSLSGHTDQIF DFAWSPCGRLGASVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCT GFDKVSERQISVYNAQKLSTPLNTASLDVSPSILIPYYDEDSSTLFVTGKGDSTIYCY EITDEEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSFTVP RIKSELFQDDLFPPTRITWSATLSAEDWFASNDKAAPKVSLKPEGMETLSSIQQVPAQ PVKKPDHPQFGGQKSEFEINKQQEIQKSVSARMEFTTKLEQDDMEGVDENEWQE" misc_feature 307..501 /gene="pod1" /note="Domain of unknown function (DUF1899); Region: DUF1899; pfam08953" /db_xref="CDD:462645" misc_feature 409..>1467 /gene="pod1" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature 547..681 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 694..798 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 820..930 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 949..1080 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1099..1182 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2701..>3855 /gene="pod1" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature order(2830..2832,2848..2850,2866..2871,2920..2925, 2977..2979,2989..2991,3007..3012,3067..3072,3124..3126, 3139..3141,3157..3162,3199..3201,3250..3252,3265..3267, 3283..3288,3325..3330,3385..3387,3397..3399,3427..3432, 3529..3531,3544..3546,3562..3567,3598..3603) /gene="pod1" /note="structural tetrad [active]" /db_xref="CDD:238121" misc_feature 2926..3045 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 3085..3195 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 3211..3324 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 3346..3468 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 3487..3558 /gene="pod1" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" polyA_site 6198 /gene="pod1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aattagtatc ttttgcccga tttttctcag ggattttccg gtatttatat actgccaaaa 61 ataccacagc cgacttgaaa tttaaattgt gctcggatta attgtggtcc cgagttgaaa 121 cgcaactgga gaggaagagg gagaggatag ccgagcgaaa gagagcgact ggcctatacc 181 atatagcata tacaatccac attctatact ccgcactcga gcagcgaaca tccagtgtcc 241 acatccgcat cggatcgcct tcaccatcgc catcacatcg cggagcagca accagtaatt 301 atggcctggc gattcaaggc ttccaagtac aaaaatgccg cacccattgt gcccaaggcg 361 gaggcctgcg tccgcgagat ctgcgtgggc agctaccaga cctacgggaa taatatcgcc 421 gcctccggcg ccttcatggc cttcaactgg gagcacaccg gttccagtgt ggccgtcctc 481 ccgctggacg attgcgggcg gaagagcaag accatgccgc tgctccacgg gcacacggac 541 acagtgacgg acctcaagtt ctcgccgttc cacgacggac tgctggccac cgcctcgcag 601 gattgcctgg ttaagatctg gcacataccg gaaaagggtc tggagcagtc gctctccgat 661 ccggaggcca tcttctcaca caagcagcgt cgcgtggaga cagtgggctt ccatccgacg 721 gccgatggcc tgatgtactc cacagccgcc ggctgtgtgg ccctcttcga tctcagcacc 781 caaaaggaga tcttctcgaa caatgagcac ccggaggtga tacagtcggc cagttggcgc 841 gaggatggct ccgttttggc caccagctgc aaggacaagt gcgtgcgtat cttcgatccc 901 cgagccgccg gttcgcccat ccagttgacc gccgaatcgc accagagcat caaggattcg 961 cgcgtcgtct ggctgggcaa tcagcagcgc atcctgacca ccggtttcga tgccgcccgc 1021 ctgcgtcagg tgatcatccg cgatgtgcgc aacttcagca cgcccgaaaa gaccctcgaa 1081 ctggactgct ccacgggcat tctaatgccg ctcttcgatc ccgacacgaa tatgctcttc 1141 ctggccggca agggcgatac gacgattaac tatctggaga ttacggacaa ggatccgtat 1201 ttgattgagg gactgcgtca caccggcgag cagacgaagg gcgcctgtct ggtgcccaag 1261 cgggcgctca aggtcatgga ggcggaggtc aaccgagtgc tgcagctgac ctctaacatg 1321 gtcataccca ttatgtacca ggtgcccagg aagacatatc gcgatttcca tgccgatctc 1381 tatccggaga ccacgggcta caagacggaa ctggtggccg gcgaatggct gaatggcagc 1441 aaccaggcgg tgcccaagat gagcctcgat cccgccaagc gcgagcatgg cgatgagcca 1501 attattattc atcgcggcaa cctaagcgat ttcgttaaga acctggagaa tcagcgggcc 1561 aagagccaaa ccaccgccgc caagcgcaac gataacgagc actttgtcat gctgaacaag 1621 ggcaacaatt tcgaggagaa gaacggcaat gacaacagca gcgagagcaa cggaaagaag 1681 agcactgcct cgcaatccca acagtcgcag ccggatgggg agtgcagtga gctcatccgg 1741 aagttcgagg ccaaatacaa ggtggactcg gagaaggaga aggcggcgaa tgcctacgcc 1801 cagtcccagg aggatgacaa ggagtcgccc accgagcagg aacactcgac gggcagcagc 1861 gaggagcact cctcgcactc atccggcggt ggaatggaca atcactcggc cagcggcagc 1921 cactcgccgc cgaagcccat gccgcgcacc tcgcgcaaca attccctgcc ggaggccagc 1981 gattccgctg gggaatcgag cagcaccacc acgccacgcc cgaggccgcg caccacggct 2041 gcgtctgcct acaagccacg tttgggcccg aagcccttct ccagcaccac gggtgacgtg 2101 tcgttcgaca aggtgttcgc cgttcccctg gcgccgggat cccatgagaa catctcgaac 2161 gtgggccagg aaagcggagt ggcggagctg atcccgcccg cccaggggcc aaagccagat 2221 ctcattgtgg aaatcgaaat caaaaagaaa cacgaaaggg agcctgtggt gggcggaaat 2281 ggagtccaga aatcgctaac cacctcggag cgtcgcaaga tattcgagca gagctccgag 2341 tcgtcggaga attcggcgga gggcgaagat cgcacggatg cggatctgcg acgcagctgc 2401 tcctcgagga gcagctttgc cgagaggcgg cgcatctacg agaatcgctc caagagtcag 2461 gtggacgaaa agccccagtc gccagtgcca ttgcgtcgcg agcactccaa agtggagcca 2521 ctgaagccca gtcaacagca gcagcagcag cagatcgaca ccaagcgcat ttcggtgccg 2581 gagggcaaac taatggagga gcatcgccgc gggaatggcg ccgccggttt gaagaaatcc 2641 gccacggagg cggccttcag tgcggccagc accaagcgca cctccaccgt cttcggcaag 2701 gtgtccaagt tcaggcattt gaagggcact cccggccaca agtcgacgca catcgagaat 2761 ttgcgcaatc tgagccgcca gataccgggc gaatgcaatg gcttccatgc caaccaggag 2821 cgcgtggcgg ttcccctctc cggacccggc ggcaagatag ccatcttcga gttgagccga 2881 ccgggacgac tgccggatgg cgtgattcca tcgcttgtga acggcagcaa catcatggac 2941 ttccagtggg atcccttcga tgcccagcgt ttggccgtcg cctgcgacga tggcatcgtg 3001 aagctctggc acatcgaagc cggcggactg agtgagccga caaattcgcc agccggcgag 3061 ctgaccgctc acctggacaa gatctacttt atccgtttcc atccgctggc cgccgacgtt 3121 ctgctgaccg ccagctacga tatgaccatc aagctgtggg atttgcgcac catgagcgag 3181 aagtgctcgc tgtcggggca cacggatcag atctttgact tcgcctggag tccctgcggc 3241 cgtttgggcg ccagcgtgtg caaggatggc aagattaggg tctacaatcc gaggaaatcg 3301 gagacgccca tcagggaggg caatggaccg gtgggaactc gaggagctcg catcacctgg 3361 gcgctggagg ggcactacat agtctgcact ggatttgata aggtttccga gcgacagatt 3421 agcgtgtaca atgcccaaaa gctgtcgacg ccattgaaca cggccagttt ggatgtgtcg 3481 ccctcgatat tgatacccta ctacgacgag gacagctcca cgctgttcgt caccggcaag 3541 ggcgactcga ccatctactg ctacgagatc accgacgagg agccgtacat ctgcccgctg 3601 tcgcaccatc gctgcacctc gctgcaccag ggcctcagct tcctcaccaa gaaccactgc 3661 gatgtggcca gcgtggagtt ctcgaaggcc tatcggctga ccaataccac catcgagccg 3721 ctaagcttca cagtgccccg cattaagagc gagctgttcc aagacgatct gttcccaccc 3781 acacgcatca cctggagcgc cacgctaagc gccgaggact ggtttgccag caacgataag 3841 gcggcaccca aggtcagctt gaagccggag ggcatggaga cattatcttc catacagcaa 3901 gtgccagcgc agcctgtgaa gaaaccggat catccccagt tcggcggtca gaagtcggaa 3961 ttcgagatca acaaacagca ggagatccag aaatcggtta gcgcgcgcat ggagttcacc 4021 accaagctgg agcaggacga catggagggc gtggacgaga acgagtggca ggagtagcag 4081 tgcagccagc gtctgcggcg gacatgaatc agttcacaat ttagcgttta accaatgggc 4141 gtaactcttt tttttaccaa tctagacatg acagcagcag aagcaacagc aaaagtgctc 4201 gacataaaca taaacaacat atatatactt gtgggcgagc gtatatagag aactcgtagt 4261 taagccgaaa gtaaaactaa cacaacacac gacatcctca tccctcgatc ctcattcctc 4321 gatcctcgtc agaatcccag catttagttc ctcgctcctc cgccaattta ctgcagttgc 4381 tcaataattg ccaaattaca aatcataagc cagttttgtt cgttttgttt gtgttgtttt 4441 ttttttaaat ctatatattt tgtgtgtatt aatttttttt ataatttacc catacatata 4501 ttttgtgttt tttatgtgtg ctatttaagt agttagtcca aaattagttt agcctactta 4561 ggtgtttaca cttacgatta atttcctggg ttctccccga gtccttcagt ttgtgtggcc 4621 atatatgtat aggatatatg gaaggactta gatgatacta cttttacata tacgcatatg 4681 tatttccctc tcagtttgtt tcatgtctgc atgcatgcga gtgagtgagt gagagagcga 4741 gagagtgtgt gtctgtcccc ctctttcgca ttatttcacc ccctgtaatc ctgtaatccc 4801 agacaccttt tcattccccc atccaagaca agaaactaaa acatatagac tgtagccaaa 4861 aaatatttgc tgagaattac aatcaagcga gacaagacaa tttttgtact gtataatgcg 4921 taaatcaaac atactgcaac agccgaatca aaccgaaaag acatgcaaac aacaattcca 4981 aaatgtataa cgaaaagact tgaacagatc tgaatggatc tccatcctct gaatatcctg 5041 cacccccgaa aaaatcccct actaacccga aaaaggaaag taataagttg ccattgaaat 5101 gcgtttataa aaaagtgaaa aatgaaaaaa ggcaatagaa cgtaactcga gtagcatacc 5161 cataggcaat aacgttttgt acttgcaata gaatatacac atttacacat atatatacac 5221 gatatatata tagtatatat tttgtatacc aatcgtaact gaaaaccaag gccaacttcc 5281 ggctgaaacg actgaactga tccaacagca taatagcgaa tagagtggca aatctataaa 5341 aatctttcga aaacaaaaca agaacaacat aacagaccag accaattctc gggtaacggg 5401 caatattgtg ctagacaagg ttctattata cagattatat atacacacac ataccatacg 5461 catagttata ggcatataaa cgtcgcaaag ccaattctat attccatatt ccaattcaaa 5521 atcaaactcc aagctgcatt taaatccaaa cgccatggaa cgactgacaa aagtattcgc 5581 ttaacattct gatctgatct gatcctcgac tagtacttat atgtcagaga ttatcccaaa 5641 aagaagacga atttccagag gtctgtggat atggaatcga tttagatcgg ggaaacaaag 5701 ggatcgcagt tctataatgt cctccccccc caaacaaaat cccattccaa attccccgaa 5761 ccgaccgccc gcagatatta tgtcattctg tatttattag ccatattcga ttacgatttt 5821 cgaacgtctc tcttatttat atttatattt atatatatct ataacaatac caatatacga 5881 aaatacaact tcaagcgata tataatacga tgataaacga gtgaaggacg acgattgatt 5941 gattgacgat tcacgattga cgagtgtgta ggcagagagt gaagtagaga agaagtagga 6001 tgcagaagca tcggcagaag gagcagaatc ggaatcagaa gcatacacat tatttataca 6061 atttatttta cagtacgagt atatccgata acccccatcc gatactctag cactaagtta 6121 taattacaat aataataatg aaggcaaaaa tatatttata tacataattc aataaaaaaa 6181 acaagcgaaa aatataaa