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LOCUS XM_070218290 3911 bp mRNA linear INV 09-DEC-2024 subunit myospheroid (mys), transcript variant X3, mRNA. ACCESSION XM_070218290 VERSION XM_070218290.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3911 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3911 /gene="mys" /note="position-specific antigen beta subunit myospheroid; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108055738" CDS 207..2747 /gene="mys" /codon_start=1 /product="integrin beta-PS isoform X1" /protein_id="XP_070074391.1" /db_xref="GeneID:108055738" /translation="MILERNRGSQVALLLVVLLAAIAAQTGAQKSGKLTTTGTSCASK LRCNTCIQVEGCGWCLDIDFKGQSRCYQNGTQKCDNQWFPQNLEKILLNEELTAESSG SSSGFSGSSGYSIESGSSGSSGSSSSSGHFSQNSGGSISGSGAHRSSGKIVQIQPQSL KLSLRVNQKHNLRVSYSQAVGYPVDLYYLMDLSKSMEDDKQSLSKLGDKLSTAMKEIT SNFRLGFGSFVDKVLMPYVSTIQKKLDHPCDNCKAPYGYHNHMPLNNNTESFSEEVKG AQVSGNLDAPEGGFDAIMQAIACRSEIGWRNESRRLLVFSTDAGFHYAGDGKLGGVIA PNDGECHLNAQGEYTHSIYQDYPSISQINQKVKDNAINIIFAVTANQLSVYEKLVEHI QGSSAAKLDNDSANVVDLVKSEYDKISSSVEMKDDASSYVKINYFSSCLGNGTPVATN KCEKVKQGTKVTFNAEIQLLKCPEDPRDWHQTIRISPVGINEYMEIQLEMLCSCPCEH SGSQGYEANASICNGHGTSMCGICQCDENHFGNKCECNAMDINSKNGNDASCRADNTT LTDCSGRGNCVCGTCDCHKRPNPEEEVSGKFCECDNFSCERNKNQLCSGPDHGTCECG QCKCKPGWGGTNCGCLESTDSCLAPGSTELCSGHGACECGVCKCTATEQGRYSGRFCE KCPTCSGRCQELKDCVQCQMYKTGVLKNGDDCANNCTLFTPVGVEKVEIEEHKDEQIC TFFDEDDCKFMFKYSEDGQVLKVSAQENKECPPKVFMLGIVLGVIAAIVLVGLAILLL WKLLTTIHDRREFARFEKERMNAKWDTGENPIYKQATSTFKNPMYAGK" misc_feature 345..1718 /gene="mys" /note="Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of...; Region: vWFA; cl00057" /db_xref="CDD:469594" misc_feature 1737..1814 /gene="mys" /note="Integrin beta epidermal growth factor like domain 1; Region: I-EGF_1; pfam18372" /db_xref="CDD:465729" misc_feature 2121..>2255 /gene="mys" /note="Domain of unknown function (DUF3844); Region: DUF3844; pfam12955" /db_xref="CDD:432898" misc_feature 2277..2531 /gene="mys" /note="Integrin beta tail domain; Region: Integrin_B_tail; pfam07965" /db_xref="CDD:462325" misc_feature 2613..2735 /gene="mys" /note="Integrin beta cytoplasmic domain; Region: Integrin_b_cyt; pfam08725" /db_xref="CDD:462580" polyA_site 3911 /gene="mys" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcaaaataag aaaagaaccg ccctgatgga aattaaattc gcgaattacg ggcgaaaact 61 cagcgaaagt tgaaccaaag tgctggcaaa agtcagataa cgagtgaaat aagtggggat 121 tgcccggcgc acggaagaga cagggataga gcacctagca ctcgcactcg cacagacatc 181 ctgcatcaac ctacacccac acagccatga tcctcgagag aaaccggggg agccaggtgg 241 cccttcttct ggtcgtcctg ctggcggcca tcgctgccca aacgggggcc cagaaatccg 301 gcaaactgac gacgaccggg acttcctgcg cctccaagct gagatgcaac acctgcatcc 361 aggtggaggg atgcggctgg tgcctggaca tcgacttcaa gggccagtca cgttgctacc 421 agaacggaac ccaaaagtgc gacaaccagt ggttcccgca gaacctggag aagattctat 481 tgaacgagga gctgaccgcc gagtccagtg gatcctctag tggcttcagt ggatccagtg 541 gctattccat cgagagcggc agcagcggca gcagcggcag cagcagcagt tcgggccact 601 ttagccagaa ctccggcggc tcgatctccg gcagcggggc gcacaggtcc tcgggcaaga 661 tagtccagat ccagccgcag tccctgaagc tctcgttgcg cgtcaatcag aagcacaacc 721 tcagggtcag ctactcccag gcggtgggct atcccgtgga tctctactac ttgatggacc 781 tctccaagtc catggaggac gacaagcaga gtctctccaa gctgggcgac aagctgtcca 841 cggccatgaa ggaaatcacc tccaacttcc gcctgggctt cggttcgttt gtggacaagg 901 tgctcatgcc ctatgtctcg accattcaga agaaactcga tcatccctgc gacaactgca 961 aggctcccta cggttaccac aatcacatgc cactcaacaa taacaccgaa agcttctctg 1021 aagaggtgaa gggcgcccag gtgtcgggca atctggatgc tccggagggc ggattcgatg 1081 ccattatgca ggccattgcc tgtcgctcgg aaatcggctg gcgcaacgag tcccgtcgcc 1141 tgctggtctt ctccacggac gccggtttcc attatgccgg cgacggcaag ctgggcggag 1201 tgattgcccc caacgacggc gagtgccatc tgaatgccca gggcgagtac acgcactcca 1261 tttaccagga ctacccgagc atctcgcaga tcaaccagaa ggtcaaggac aatgccatca 1321 acattatctt cgcggtgacc gccaatcagc tgtcggtcta cgagaagctg gtggagcaca 1381 ttcagggctc ctcggccgcc aagctggaca acgactcggc caacgtggtg gatctggtca 1441 agagtgaata cgataaaatc tcctcttcgg tggagatgaa ggacgacgcc agttcgtatg 1501 tgaagatcaa ctacttctcc tcctgcctgg gcaacggaac cccagtggcc accaacaagt 1561 gcgagaaggt gaagcagggc accaaggtga ccttcaatgc cgagatccag ctgctcaagt 1621 gccccgagga tccgcgcgac tggcaccaga ccatccgcat ttcgcccgtc ggcatcaacg 1681 agtacatgga gatccagctg gagatgctct gctcctgtcc ctgcgagcat tccgggtcgc 1741 agggctacga ggcgaatgcc tcgatctgca acggccacgg cacctccatg tgcggcatct 1801 gccagtgcga cgagaatcac tttggcaaca agtgcgagtg caatgcgatg gacattaact 1861 cgaagaacgg caacgacgct tcctgccggg cggacaacac gacgctgacg gactgctcgg 1921 gtcgcggcaa ctgcgtctgc ggcacctgcg actgccacaa gcgtccgaat cccgaggagg 1981 aggtgtccgg caagttctgc gagtgcgaca actttagctg cgagcggaac aagaaccagc 2041 tgtgctcggg ccccgatcac ggcacctgcg agtgcggcca gtgcaagtgc aagcccggct 2101 ggggtggcac caactgcggc tgcctggagt ccacggacag ctgtttggcg cccggcagca 2161 cggaactctg ctccggccac ggcgcctgcg agtgcggcgt ctgcaagtgc acggccaccg 2221 agcagggacg ctactcgggc aggttctgcg agaagtgccc cacctgctcg ggtcgatgcc 2281 aggagctgaa ggactgcgtc cagtgccaga tgtacaagac gggcgtgctg aagaacggcg 2341 atgactgcgc caataactgc actctgttca cgcccgttgg cgtggagaag gtggagatcg 2401 aggagcacaa ggacgagcag atatgcacct tcttcgacga ggacgactgc aagttcatgt 2461 tcaagtacag cgaggatgga caggtgctca aggtctccgc ccaggagaac aaggagtgtc 2521 cgcccaaggt cttcatgctg ggcattgtcc tgggcgtcat tgcggccatc gtgctcgtgg 2581 gtctggccat tctgctgctc tggaagctgc tcaccaccat ccacgatcgc cgcgagttcg 2641 cccgcttcga aaaggagcgc atgaacgcca agtgggatac gggcgagaat cccatctaca 2701 agcaggccac ctccaccttc aagaacccca tgtatgcggg caaataaatc cgatatctaa 2761 ctaaatatta gggaaatgta aactgtctgt gcttgaaccg gaaatcagaa aaccaaccac 2821 caaacaaatc cacaagaaac caatcttcag aacacttcga cgaagctgct ttgccccggg 2881 tgcaaaacca ctaaagtcaa ctgccattga aacgcgttct aaactaagtc aaccttacat 2941 atatatatat ttatatatac atttacacaa gagcctttat acattgcgta tacttaacga 3001 gcaaacgatt tgtgccttgc aacatatttt agattatatc tatacgtata taaacgagca 3061 agagaacaga caacgcacag cagccagaaa agaaaaaaat aataagaaat aacagccaac 3121 aaatgagcca cgaacgatag ttagaaatac gatttttgtg ttctttattg tgcccatagt 3181 atccaagtat ccaagccagc acatgaattt gtattttatt tttgactctt aatttgtaat 3241 ttgtattttt tgttttgtgt ttcccttact gttccctaat ttttatcatt aacgagaagc 3301 cactgcaata tagtgatgta tttaaccgaa agcgaaaccg aaatcgaaac tagaaatggg 3361 atacttaact gatactgatc tgctaccctc ccaaaaaacc cctgtctaaa tgtttttcta 3421 ttgtttttaa agctaacttt acaattaata tttaagcaat taacatttaa gcttgtaatt 3481 gttaatttcg aaatgcaaga gtgccccagg gacaatttgt ttttctgtgg aatctttaca 3541 tttttacttt tgtacgtttt atttatcaag aaaaagaaga gggcagaaag gatgacgagg 3601 gaaaccgcgt ggaatatagt ctcttgtgtg tgttttttgt tttattgaat ttcgaccatt 3661 aatagtaaat taatactact atataaatat atattttttg ccatttgtac tgattactga 3721 ttaacattta aagtaatgcg aaaacaaaac aagaactttt gtataaaaaa aaggaaaatt 3781 attttgagta attttattga atgaaaaccc atatgaagtg gaaacactag caatataaaa 3841 cgatgtggaa attaaattgt ttgacgctaa ttttagtgaa ataaataaaa gtaaattata 3901 aaaaaagaca a