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LOCUS XM_070218283 2203 bp mRNA linear INV 09-DEC-2024 (LOC108056420), transcript variant X3, mRNA. ACCESSION XM_070218283 VERSION XM_070218283.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2203 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2203 /gene="LOC108056420" /note="apoptosis-inducing factor 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056420" CDS 229..1887 /gene="LOC108056420" /codon_start=1 /product="apoptosis-inducing factor 3 isoform X3" /protein_id="XP_070074384.1" /db_xref="GeneID:108056420" /translation="MSTEASSPDAEYTGAVNVELNVADLKENEMRQVDFDEDTRVLVV KQNDRLLAVGAKCTHYGAPLQTGALGLGRVRCPWHGACFNLENGDIEDFPGLDSLPCY RVEVGNQGQVLLRAKRSDLANNKRLKNMVKRKPDDQRVFIVVGGGPSGAVAVETLRQE GFTGRLIFVCREEYLPYDRVKISKAMSLEIEQLRFRDEDFYREYDIELWQGVAAERLD TAQKELHCSNGYVVKYDKIYLATGCSAFRPPIPGVNLQNVRTVRELADTKAILASISA ESRVVCLGSSFIALEAAAGLVAKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKV VMRMQSGISEILGDDEGRVREVVLLDGSRLPCDLLILGTGSKLNTQFLAKSGVKVNRN GSVDVTDFLESNVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAINMCGGV KKLEAVPFFFTLIFGKGIRYAGHGSYKEVIVDGSLEEFKFVAYFVNEADTVTAVASCG RDPVVAQFAELISQGKCLGRGQIEDPATRQDWTRKLGEPLPQVR" misc_feature 289..567 /gene="LOC108056420" /note="AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox). The...; Region: Rieske_AIFL_N; cd03478" /db_xref="CDD:239560" misc_feature order(397..399,403..408,454..456,463..465,469..471) /gene="LOC108056420" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:239560" misc_feature 649..1839 /gene="LOC108056420" /note="NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; Region: NirB; COG1251" /db_xref="CDD:440863" polyA_site 2203 /gene="LOC108056420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttcgcttaaa ttggcggtct ccgattcatt cgtccgtcaa ctgccggtgc ctaaacgtta 61 gcaagctctt aaaaccagtc caagctgaaa aaaaaacact ctcttagctt ctcggcctat 121 ccaatccttt tcggcgatac ctgatactga ttttgtggtg ccgtgggttc gtaccagtcc 181 aagtgcagca accaaagcaa ccagagcaac cagagtccca gcacaaccat gtcgacggag 241 gcctcctcgc cggacgcgga gtacacgggt gcggtgaacg tggagctgaa tgtggcggac 301 ctcaaggaga acgagatgag gcaggtggac ttcgatgagg acacccgcgt gctggtggtg 361 aagcagaacg accgcctgct ggcggtgggc gccaagtgca cccactacgg ggctccgctg 421 cagacgggcg ccttgggttt gggtcgcgtc cgctgtccct ggcacggcgc ctgcttcaac 481 ctggagaacg gcgacatcga ggactttccc gggctcgact ccctgccctg ctaccgcgtg 541 gaggtgggca accaggggca ggtgctgctc cgggccaagc gctccgatct ggccaacaac 601 aagcggctga agaacatggt caagcggaag cccgacgacc agcgggtctt cattgtcgtg 661 ggcggcggtc cctcgggcgc cgtggccgtg gagacgctgc gccaggaggg cttcaccggc 721 cgcctgatct tcgtgtgccg cgaggagtac ctgccctacg accgcgtcaa gatctccaag 781 gccatgagcc tggagatcga gcagctgcgc ttccgcgacg aggacttcta ccgcgagtac 841 gacatcgagc tgtggcaggg cgtggccgcc gagcggctgg acaccgcgca gaaggagctg 901 cactgcagca acggctatgt ggtgaagtac gacaagatct acctggccac cggctgctcg 961 gccttccggc cgcccattcc gggcgtcaat ctgcagaacg ttcgcacggt ccgcgagctg 1021 gccgacacca aggccatcct ggcctccatc tccgccgagt cgcgcgtcgt ctgtctgggc 1081 tccagcttca tcgccctgga ggccgccgcc ggcctggtcg ccaaggtgca gagcgtcacc 1141 gtcgtgggcc gcgagaacgt gccgctgaag gccgccttcg gggcggagat cggccagcgg 1201 gtgctgcagc tgttcgagga caacaaggtg gtcatgcgca tgcagagcgg catctcggag 1261 atcctgggcg acgacgaggg cagagtgagg gaagtggtgc tgctggacgg ctcgcggctg 1321 ccctgcgacc tgctcatcct gggcacgggc tccaagctga acacccagtt cctggccaag 1381 tcgggcgtga aggtgaatcg gaatgggtcc gtggacgtca ccgacttcct ggagtccaat 1441 gtgccggatg tgtatgtggg cggcgacata gccaacgccc acatccatgg gttggcccac 1501 gaccgcgtga acatcgggca ctaccagctg gcccagtacc acggacgcgt ggcggccatc 1561 aacatgtgcg gcggcgtcaa gaagctggag gccgtgccct tcttcttcac cctgatcttc 1621 ggcaagggca tccgctacgc gggccacggc tcctacaagg aggtcatcgt cgacggcagc 1681 ctggaggagt tcaagttcgt ggcctacttc gtcaacgagg cggacacggt gacggcggtg 1741 gcctcgtgcg gccgcgatcc cgtcgtggcc cagttcgccg agctcatctc gcagggcaag 1801 tgcctcggaa ggggccagat cgaggacccc gccacgcggc aggactggac caggaagctg 1861 ggcgagccgc tgccccaagt tcgctaggaa aaatgaagaa acacctgtgt attatcgctg 1921 agattcgttg ttagatgtat gcatattcat gctatcgttg ggtattcatt atatactcct 1981 tatgcaaggc acctgcaagg tgtccaaccc catctgtgta tatttataat cgtagttggc 2041 tagtgactcc ctggagttcc tgccgcggcg gccgcttttg ggcccccgag aagatcaaag 2101 atttaagctt tttatcccct tgccacacaa tgtatttctt gagtcatatt cgtttatttt 2161 tgctaaataa agtgttttaa cgatgtcgta attccagtta aaa