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LOCUS XM_070218282 2308 bp mRNA linear INV 09-DEC-2024 (LOC108056420), transcript variant X1, mRNA. ACCESSION XM_070218282 VERSION XM_070218282.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2308 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2308 /gene="LOC108056420" /note="apoptosis-inducing factor 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056420" CDS 31..1992 /gene="LOC108056420" /codon_start=1 /product="apoptosis-inducing factor 3 isoform X1" /protein_id="XP_070074383.1" /db_xref="GeneID:108056420" /translation="MVVWQPYRAALNLAKTRGGVENLLRIFERKPRTHLRILNAQPFL NNRRLLTMGSINCKEYKTTGSTPKKEKSTGNTGGAVGSYQSKCSNQSNQSNQSPSTTM STEASSPDAEYTGAVNVELNVADLKENEMRQVDFDEDTRVLVVKQNDRLLAVGAKCTH YGAPLQTGALGLGRVRCPWHGACFNLENGDIEDFPGLDSLPCYRVEVGNQGQVLLRAK RSDLANNKRLKNMVKRKPDDQRVFIVVGGGPSGAVAVETLRQEGFTGRLIFVCREEYL PYDRVKISKAMSLEIEQLRFRDEDFYREYDIELWQGVAAERLDTAQKELHCSNGYVVK YDKIYLATGCSAFRPPIPGVNLQNVRTVRELADTKAILASISAESRVVCLGSSFIALE AAAGLVAKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKVVMRMQSGISEILGDD EGRVREVVLLDGSRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDVTDFLESNVPD VYVGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAINMCGGVKKLEAVPFFFTLIFG KGIRYAGHGSYKEVIVDGSLEEFKFVAYFVNEADTVTAVASCGRDPVVAQFAELISQG KCLGRGQIEDPATRQDWTRKLGEPLPQVR" misc_feature 394..672 /gene="LOC108056420" /note="AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox). The...; Region: Rieske_AIFL_N; cd03478" /db_xref="CDD:239560" misc_feature order(502..504,508..513,559..561,568..570,574..576) /gene="LOC108056420" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:239560" misc_feature 754..1944 /gene="LOC108056420" /note="NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; Region: NirB; COG1251" /db_xref="CDD:440863" polyA_site 2308 /gene="LOC108056420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttaataaata ttaaaggaca atatctaacc atggttgtgt ggcaacccta tcgagcagct 61 cttaacttgg ccaaaacgcg cggaggcgtc gaaaaccttc tgaggatatt tgagcgtaaa 121 ccaagaaccc atctgagaat actcaacgca cagccgtttt tgaacaaccg ccgcctactc 181 acaatgggtt ccatcaactg caaggaatac aaaactacgg ggagtacccc caaaaaggaa 241 aagtcgacgg gtaacacagg tggtgccgtg ggttcgtacc agtccaagtg cagcaaccaa 301 agcaaccaga gcaaccagag tcccagcaca accatgtcga cggaggcctc ctcgccggac 361 gcggagtaca cgggtgcggt gaacgtggag ctgaatgtgg cggacctcaa ggagaacgag 421 atgaggcagg tggacttcga tgaggacacc cgcgtgctgg tggtgaagca gaacgaccgc 481 ctgctggcgg tgggcgccaa gtgcacccac tacggggctc cgctgcagac gggcgccttg 541 ggtttgggtc gcgtccgctg tccctggcac ggcgcctgct tcaacctgga gaacggcgac 601 atcgaggact ttcccgggct cgactccctg ccctgctacc gcgtggaggt gggcaaccag 661 gggcaggtgc tgctccgggc caagcgctcc gatctggcca acaacaagcg gctgaagaac 721 atggtcaagc ggaagcccga cgaccagcgg gtcttcattg tcgtgggcgg cggtccctcg 781 ggcgccgtgg ccgtggagac gctgcgccag gagggcttca ccggccgcct gatcttcgtg 841 tgccgcgagg agtacctgcc ctacgaccgc gtcaagatct ccaaggccat gagcctggag 901 atcgagcagc tgcgcttccg cgacgaggac ttctaccgcg agtacgacat cgagctgtgg 961 cagggcgtgg ccgccgagcg gctggacacc gcgcagaagg agctgcactg cagcaacggc 1021 tatgtggtga agtacgacaa gatctacctg gccaccggct gctcggcctt ccggccgccc 1081 attccgggcg tcaatctgca gaacgttcgc acggtccgcg agctggccga caccaaggcc 1141 atcctggcct ccatctccgc cgagtcgcgc gtcgtctgtc tgggctccag cttcatcgcc 1201 ctggaggccg ccgccggcct ggtcgccaag gtgcagagcg tcaccgtcgt gggccgcgag 1261 aacgtgccgc tgaaggccgc cttcggggcg gagatcggcc agcgggtgct gcagctgttc 1321 gaggacaaca aggtggtcat gcgcatgcag agcggcatct cggagatcct gggcgacgac 1381 gagggcagag tgagggaagt ggtgctgctg gacggctcgc ggctgccctg cgacctgctc 1441 atcctgggca cgggctccaa gctgaacacc cagttcctgg ccaagtcggg cgtgaaggtg 1501 aatcggaatg ggtccgtgga cgtcaccgac ttcctggagt ccaatgtgcc ggatgtgtat 1561 gtgggcggcg acatagccaa cgcccacatc catgggttgg cccacgaccg cgtgaacatc 1621 gggcactacc agctggccca gtaccacgga cgcgtggcgg ccatcaacat gtgcggcggc 1681 gtcaagaagc tggaggccgt gcccttcttc ttcaccctga tcttcggcaa gggcatccgc 1741 tacgcgggcc acggctccta caaggaggtc atcgtcgacg gcagcctgga ggagttcaag 1801 ttcgtggcct acttcgtcaa cgaggcggac acggtgacgg cggtggcctc gtgcggccgc 1861 gatcccgtcg tggcccagtt cgccgagctc atctcgcagg gcaagtgcct cggaaggggc 1921 cagatcgagg accccgccac gcggcaggac tggaccagga agctgggcga gccgctgccc 1981 caagttcgct aggaaaaatg aagaaacacc tgtgtattat cgctgagatt cgttgttaga 2041 tgtatgcata ttcatgctat cgttgggtat tcattatata ctccttatgc aaggcacctg 2101 caaggtgtcc aaccccatct gtgtatattt ataatcgtag ttggctagtg actccctgga 2161 gttcctgccg cggcggccgc ttttgggccc ccgagaagat caaagattta agctttttat 2221 ccccttgcca cacaatgtat ttcttgagtc atattcgttt atttttgcta aataaagtgt 2281 tttaacgatg tcgtaattcc agttaaaa